RNA–Protein interactions for RNA: ENST00000543631.5

SPARCL1-210, Transcript of SPARC like 1, humanhuman

TSL 4

Gene SPARCL1, Length 583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARCL1-210ENST00000543631 CDHR5Q9HBB8 845 aa8.1□□□□□ -1.11
SPARCL1-210ENST00000543631 SOGA1O94964 1423 aa8.1□□□□□ -1.11
SPARCL1-210ENST00000543631 URB2Q14146 1524 aaKnown RBP8.09□□□□□ -1.11
SPARCL1-210ENST00000543631 SPDYE16A6NNV3 312 aaPredicted RBP8.09□□□□□ -1.11
SPARCL1-210ENST00000543631 GFRA3O60609 400 aa8.09□□□□□ -1.11
SPARCL1-210ENST00000543631 ZNF516Q92618 1163 aa8.09□□□□□ -1.11
SPARCL1-210ENST00000543631 TATDN2Q93075 761 aa8.09□□□□□ -1.11
SPARCL1-210ENST00000543631 OSBPP22059 807 aa8.08□□□□□ -1.12
SPARCL1-210ENST00000543631 PPP1R18Q6NYC8 613 aa8.08□□□□□ -1.12
SPARCL1-210ENST00000543631 PRKD2Q9BZL6 878 aa8.08□□□□□ -1.12
SPARCL1-210ENST00000543631 CUX2O14529 1486 aa8.07□□□□□ -1.12
SPARCL1-210ENST00000543631 POLA1P09884 1462 aaPredicted RBP8.07□□□□□ -1.12
SPARCL1-210ENST00000543631 APLP1P51693 650 aa8.07□□□□□ -1.12
SPARCL1-210ENST00000543631 TRAF7Q6Q0C0 670 aa8.07□□□□□ -1.12
SPARCL1-210ENST00000543631 TTC13Q8NBP0 860 aa8.07□□□□□ -1.12
SPARCL1-210ENST00000543631 IL21Q9HBE4 155 aa8.07□□□□□ -1.12
SPARCL1-210ENST00000543631 LOC105371045A0A1W2PR82 267 aa8.06□□□□□ -1.12
SPARCL1-210ENST00000543631 UBTFP17480 764 aaKnown RBP8.06□□□□□ -1.12
SPARCL1-210ENST00000543631 CERKQ8TCT0 537 aa8.06□□□□□ -1.12
SPARCL1-210ENST00000543631 PNMA3Q9UL41 463 aa8.06□□□□□ -1.12
SPARCL1-210ENST00000543631 WDR62O43379 1518 aa8.06□□□□□ -1.12
SPARCL1-210ENST00000543631 NRG2O14511 850 aaPredicted RBP8.05□□□□□ -1.12
SPARCL1-210ENST00000543631 NKX2-3Q8TAU0 364 aa8.05□□□□□ -1.12
SPARCL1-210ENST00000543631 BBXQ8WY36 941 aaPredicted RBP8.05□□□□□ -1.12
SPARCL1-210ENST00000543631 NPDC1Q9NQX5 325 aaPredicted RBP8.05□□□□□ -1.12
SPARCL1-210ENST00000543631 RUSC2Q8N2Y8 1516 aa8.04□□□□□ -1.12
SPARCL1-210ENST00000543631 ABCA10Q8WWZ4 1543 aa8.04□□□□□ -1.12
SPARCL1-210ENST00000543631 NBPF26B4DH59 902 aa8.04□□□□□ -1.12
SPARCL1-210ENST00000543631 NUDT18Q6ZVK8 323 aa8.04□□□□□ -1.12
SPARCL1-210ENST00000543631 RBM27Q9P2N5 1060 aaKnown RBP8.04□□□□□ -1.12
SPARCL1-210ENST00000543631 V9GY48 417 aaPredicted RBP8.04□□□□□ -1.12
SPARCL1-210ENST00000543631 RAD54L2Q9Y4B4 1467 aa8.04□□□□□ -1.12
SPARCL1-210ENST00000543631 THOC2Q8NI27 1593 aaKnown RBP8.04□□□□□ -1.12
SPARCL1-210ENST00000543631 GOLGA3Q08378 1498 aa8.03□□□□□ -1.12
SPARCL1-210ENST00000543631 IFT140Q96RY7 1462 aa8.03□□□□□ -1.12
SPARCL1-210ENST00000543631 E2F4Q16254 413 aa8.03□□□□□ -1.12
SPARCL1-210ENST00000543631 KIF21BO75037 1637 aa8.03□□□□□ -1.12
SPARCL1-210ENST00000543631 GRXCR2A6NFK2 248 aa8.02□□□□□ -1.13
SPARCL1-210ENST00000543631 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.02□□□□□ -1.13
SPARCL1-210ENST00000543631 WDR97A6NE52 1622 aa8.02□□□□□ -1.13
SPARCL1-210ENST00000543631 CUL7Q14999 1698 aa8□□□□□ -1.13
SPARCL1-210ENST00000543631 EMID1Q96A84 441 aaPredicted RBP8□□□□□ -1.13
SPARCL1-210ENST00000543631 GAPVD1Q14C86 1478 aa8□□□□□ -1.13
SPARCL1-210ENST00000543631 TARBP1Q13395 1621 aaKnown RBP7.99□□□□□ -1.13
SPARCL1-210ENST00000543631 PBRM1Q86U86 1689 aa7.98□□□□□ -1.13
SPARCL1-210ENST00000543631 ERICH3Q5RHP9 1530 aa7.98□□□□□ -1.13
SPARCL1-210ENST00000543631 TDRD9Q8NDG6 1382 aaKnown RBP7.98□□□□□ -1.13
SPARCL1-210ENST00000543631 SWT1Q5T5J6 900 aaKnown RBP7.98□□□□□ -1.13
SPARCL1-210ENST00000543631 PADI6Q6TGC4 694 aa7.98□□□□□ -1.13
SPARCL1-210ENST00000543631 TRIM67Q6ZTA4 783 aa7.98□□□□□ -1.13
SPARCL1-210ENST00000543631 CARMIL1Q5VZK9 1371 aa7.97□□□□□ -1.13
SPARCL1-210ENST00000543631 ABCA5Q8WWZ7 1642 aa7.97□□□□□ -1.13
SPARCL1-210ENST00000543631 EYA1Q99502 592 aa7.97□□□□□ -1.13
SPARCL1-210ENST00000543631 RAPGEF2Q9Y4G8 1499 aa7.97□□□□□ -1.13
SPARCL1-210ENST00000543631 IGF1RP08069 1367 aa7.97□□□□□ -1.13
SPARCL1-210ENST00000543631 TNIKQ9UKE5 1360 aa7.97□□□□□ -1.13
SPARCL1-210ENST00000543631 GRIN2BQ13224 1484 aa7.95□□□□□ -1.14
SPARCL1-210ENST00000543631 PRXQ9BXM0 1461 aa7.95□□□□□ -1.14
SPARCL1-210ENST00000543631 RNF40O75150 1001 aa7.95□□□□□ -1.14
SPARCL1-210ENST00000543631 COPS2P61201 443 aa7.95□□□□□ -1.14
SPARCL1-210ENST00000543631 PDZRN3Q9UPQ7 1066 aa7.95□□□□□ -1.14
SPARCL1-210ENST00000543631 SPRYD3Q8NCJ5 442 aa7.94□□□□□ -1.14
SPARCL1-210ENST00000543631 AQRO60306 1485 aaKnown RBP eCLIP7.94□□□□□ -1.14
SPARCL1-210ENST00000543631 EIF4G3O43432 1585 aaKnown RBP7.93□□□□□ -1.14
SPARCL1-210ENST00000543631 ZPR1O75312 459 aa7.93□□□□□ -1.14
SPARCL1-210ENST00000543631 RANGAP1P46060 587 aaPredicted RBP7.92□□□□□ -1.14
SPARCL1-210ENST00000543631 SLF2Q8IX21 1173 aa7.92□□□□□ -1.14
SPARCL1-210ENST00000543631 TMUB1Q9BVT8 246 aa7.92□□□□□ -1.14
SPARCL1-210ENST00000543631 CTTNBP2Q8WZ74 1663 aa7.92□□□□□ -1.14
SPARCL1-210ENST00000543631 FHAD1B1AJZ9 1412 aa7.91□□□□□ -1.14
SPARCL1-210ENST00000543631 CEP162Q5TB80 1403 aa7.91□□□□□ -1.14
SPARCL1-210ENST00000543631 ZNF608Q9ULD9 1512 aaPredicted RBP7.91□□□□□ -1.14
SPARCL1-210ENST00000543631 MAGI1Q96QZ7 1491 aaPredicted RBP7.9□□□□□ -1.14
SPARCL1-210ENST00000543631 RNF223E7ERA6 249 aa7.9□□□□□ -1.14
SPARCL1-210ENST00000543631 CHMP7Q8WUX9 453 aaPredicted RBP7.9□□□□□ -1.14
SPARCL1-210ENST00000543631 CLIP1P30622 1438 aa7.89□□□□□ -1.15
SPARCL1-210ENST00000543631 TLL1O43897 1013 aa7.89□□□□□ -1.15
SPARCL1-210ENST00000543631 ZNF787Q6DD87 383 aa7.89□□□□□ -1.15
SPARCL1-210ENST00000543631 BLOC1S3Q6QNY0 202 aa7.89□□□□□ -1.15
SPARCL1-210ENST00000543631 ZNF775Q96BV0 537 aaPredicted RBP7.89□□□□□ -1.15
SPARCL1-210ENST00000543631 ADAMTS12P58397 1594 aa7.88□□□□□ -1.15
SPARCL1-210ENST00000543631 SNAPC4Q5SXM2 1469 aa7.88□□□□□ -1.15
SPARCL1-210ENST00000543631 HDGFP51858 240 aaKnown RBP7.88□□□□□ -1.15
SPARCL1-210ENST00000543631 NECTIN2Q92692 538 aa7.88□□□□□ -1.15
SPARCL1-210ENST00000543631 MLLT3P42568 568 aaPredicted RBP7.87□□□□□ -1.15
SPARCL1-210ENST00000543631 GGCXP38435 758 aa7.86□□□□□ -1.15
SPARCL1-210ENST00000543631 PCDHB3Q9Y5E6 796 aa7.86□□□□□ -1.15
SPARCL1-210ENST00000543631 SLC19A1P41440 591 aa7.85□□□□□ -1.15
SPARCL1-210ENST00000543631 PTGDRQ13258 359 aa7.85□□□□□ -1.15
SPARCL1-210ENST00000543631 SPRYD7Q5W111 196 aa7.85□□□□□ -1.15
SPARCL1-210ENST00000543631 TMEM134Q9H6X4 195 aa7.85□□□□□ -1.15
SPARCL1-210ENST00000543631 SYNJ2O15056 1496 aa7.85□□□□□ -1.15
SPARCL1-210ENST00000543631 POTECB2RU33 542 aa7.84□□□□□ -1.15
SPARCL1-210ENST00000543631 PPEF1O14829 653 aaPredicted RBP7.84□□□□□ -1.15
SPARCL1-210ENST00000543631 PRR20EP86478 221 aa7.84□□□□□ -1.15
SPARCL1-210ENST00000543631 PRR20CP86479 221 aa7.84□□□□□ -1.15
SPARCL1-210ENST00000543631 PRR20DP86480 221 aa7.84□□□□□ -1.15
SPARCL1-210ENST00000543631 PRR20BP86481 221 aa7.84□□□□□ -1.15
SPARCL1-210ENST00000543631 PRR20AP86496 221 aa7.84□□□□□ -1.15
SPARCL1-210ENST00000543631 MYT1Q01538 1121 aa7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms