RNA–Protein interactions for RNA: ENST00000543631.5

SPARCL1-210, Transcript of SPARC like 1, humanhuman

TSL 4

Gene SPARCL1, Length 583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARCL1-210ENST00000543631 AEBP2Q6ZN18 517 aaPredicted RBP21.41■■□□□ 1.02
SPARCL1-210ENST00000543631 CHIC1Q5VXU3 224 aa20.07■□□□□ 0.8
SPARCL1-210ENST00000543631 SENP3Q9H4L4 574 aaPredicted RBP18.13■□□□□ 0.49
SPARCL1-210ENST00000543631 PHF23Q9BUL5 403 aaPredicted RBP17.92■□□□□ 0.46
SPARCL1-210ENST00000543631 FOXD1Q16676 465 aa17.02■□□□□ 0.32
SPARCL1-210ENST00000543631 POTEDQ86YR6 584 aa15.91■□□□□ 0.14
SPARCL1-210ENST00000543631 MSH5O43196 834 aa15.88■□□□□ 0.13
SPARCL1-210ENST00000543631 PLPPR3Q6T4P5 718 aa15.87■□□□□ 0.13
SPARCL1-210ENST00000543631 PPP6R1Q9UPN7 881 aa15.83■□□□□ 0.12
SPARCL1-210ENST00000543631 PIAS4Q8N2W9 510 aaPredicted RBP15.77■□□□□ 0.12
SPARCL1-210ENST00000543631 ADRA2BP18089 450 aa15.7■□□□□ 0.1
SPARCL1-210ENST00000543631 MAPK8IP2Q13387 824 aaPredicted RBP14.5□□□□□ -0.09
SPARCL1-210ENST00000543631 DMRT2Q9Y5R5 561 aa14.41□□□□□ -0.1
SPARCL1-210ENST00000543631 SCAF1Q9H7N4 1312 aaKnown RBP14.18□□□□□ -0.14
SPARCL1-210ENST00000543631 PPP4R3CPQ6ZMV5 832 aa13.92□□□□□ -0.18
SPARCL1-210ENST00000543631 HOXD11P31277 338 aaPredicted RBP13.82□□□□□ -0.2
SPARCL1-210ENST00000543631 CACNB1Q02641 598 aaPredicted RBP13.71□□□□□ -0.21
SPARCL1-210ENST00000543631 CNKSR2Q8WXI2 1034 aa13.68□□□□□ -0.22
SPARCL1-210ENST00000543631 DCAF8L1A6NGE4 600 aa13.67□□□□□ -0.22
SPARCL1-210ENST00000543631 RNF39Q9H2S5 420 aa13.63□□□□□ -0.23
SPARCL1-210ENST00000543631 RNF216Q9NWF9 866 aaPredicted RBP13.63□□□□□ -0.23
SPARCL1-210ENST00000543631 DNAJC5BQ9UF47 199 aa13.36□□□□□ -0.27
SPARCL1-210ENST00000543631 C1QBPQ07021 282 aaKnown RBP13.34□□□□□ -0.27
SPARCL1-210ENST00000543631 NCBP3Q53F19 620 aaKnown RBP13.22□□□□□ -0.29
SPARCL1-210ENST00000543631 NPM3O75607 178 aaKnown RBP13.18□□□□□ -0.3
SPARCL1-210ENST00000543631 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.04□□□□□ -0.32
SPARCL1-210ENST00000543631 U3KPZ7 1027 aaPredicted RBP12.88□□□□□ -0.35
SPARCL1-210ENST00000543631 KCNA4P22459 653 aa12.77□□□□□ -0.37
SPARCL1-210ENST00000543631 SPINK5Q9NQ38 1064 aaPredicted RBP12.74□□□□□ -0.37
SPARCL1-210ENST00000543631 SLC4A2P04920 1241 aa12.69□□□□□ -0.38
SPARCL1-210ENST00000543631 DSG3P32926 999 aa12.69□□□□□ -0.38
SPARCL1-210ENST00000543631 CAPN15O75808 1086 aa12.61□□□□□ -0.39
SPARCL1-210ENST00000543631 POTEHQ6S545 545 aa12.39□□□□□ -0.43
SPARCL1-210ENST00000543631 TRHP20396 242 aaPredicted RBP12.37□□□□□ -0.43
SPARCL1-210ENST00000543631 ABCB7O75027 752 aa12.36□□□□□ -0.43
SPARCL1-210ENST00000543631 ZNF219Q9P2Y4 722 aaPredicted RBP12.34□□□□□ -0.43
SPARCL1-210ENST00000543631 APLP2Q06481 763 aa12.28□□□□□ -0.44
SPARCL1-210ENST00000543631 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.27□□□□□ -0.45
SPARCL1-210ENST00000543631 HNRNPUL2Q1KMD3 747 aaKnown RBP12.27□□□□□ -0.45
SPARCL1-210ENST00000543631 SAMD1Q6SPF0 538 aaPredicted RBP12.24□□□□□ -0.45
SPARCL1-210ENST00000543631 MYCNP04198 464 aaPredicted RBP12.12□□□□□ -0.47
SPARCL1-210ENST00000543631 POLA2Q14181 598 aa12.03□□□□□ -0.48
SPARCL1-210ENST00000543631 ATF5Q9Y2D1 282 aaPredicted RBP11.99□□□□□ -0.49
SPARCL1-210ENST00000543631 RBM42Q9BTD8 480 aaKnown RBP11.98□□□□□ -0.49
SPARCL1-210ENST00000543631 SLC4A1APQ9BWU0 796 aaKnown RBP11.93□□□□□ -0.5
SPARCL1-210ENST00000543631 FOXD4L1Q9NU39 408 aa11.91□□□□□ -0.5
SPARCL1-210ENST00000543631 CHRDL2Q6WN34 429 aa11.87□□□□□ -0.51
SPARCL1-210ENST00000543631 ZBTB22O15209 634 aa11.83□□□□□ -0.52
SPARCL1-210ENST00000543631 AKT1S1Q96B36 256 aa11.73□□□□□ -0.53
SPARCL1-210ENST00000543631 ZBTB12Q9Y330 459 aaPredicted RBP11.7□□□□□ -0.54
SPARCL1-210ENST00000543631 OSCARQ8IYS5 282 aa11.69□□□□□ -0.54
SPARCL1-210ENST00000543631 REM2Q8IYK8 340 aaPredicted RBP11.65□□□□□ -0.54
SPARCL1-210ENST00000543631 PIP4P2Q8N4L2 257 aa11.59□□□□□ -0.55
SPARCL1-210ENST00000543631 ATXN8OSP0DMR3 200 aa11.56□□□□□ -0.56
SPARCL1-210ENST00000543631 PITPNM1O00562 1244 aa11.55□□□□□ -0.56
SPARCL1-210ENST00000543631 SP7Q8TDD2 431 aaPredicted RBP11.52□□□□□ -0.57
SPARCL1-210ENST00000543631 FXR2P51116 673 aaKnown RBP eCLIP11.51□□□□□ -0.57
SPARCL1-210ENST00000543631 MKRN4PQ13434 485 aaPredicted RBP11.43□□□□□ -0.58
SPARCL1-210ENST00000543631 SPDYE2BA6NHP3 402 aa11.38□□□□□ -0.59
SPARCL1-210ENST00000543631 SPDYE6P0CI01 402 aa11.38□□□□□ -0.59
SPARCL1-210ENST00000543631 SPDYE2Q495Y8 402 aa11.38□□□□□ -0.59
SPARCL1-210ENST00000543631 EVX2Q03828 476 aa11.35□□□□□ -0.59
SPARCL1-210ENST00000543631 NISCHQ9Y2I1 1504 aa11.32□□□□□ -0.6
SPARCL1-210ENST00000543631 HAX1O00165 279 aa11.32□□□□□ -0.6
SPARCL1-210ENST00000543631 FBLN2P98095 1184 aa11.32□□□□□ -0.6
SPARCL1-210ENST00000543631 SSUH2Q9Y2M2 353 aa11.3□□□□□ -0.6
SPARCL1-210ENST00000543631 SPDYE1Q8NFV5 336 aaPredicted RBP11.2□□□□□ -0.62
SPARCL1-210ENST00000543631 PRKAR2AP13861 404 aaKnown RBP11.19□□□□□ -0.62
SPARCL1-210ENST00000543631 ZNF692Q9BU19 519 aaPredicted RBP11.18□□□□□ -0.62
SPARCL1-210ENST00000543631 CLEC11AQ9Y240 323 aa11.16□□□□□ -0.62
SPARCL1-210ENST00000543631 C19orf67A6NJJ6 358 aa11.14□□□□□ -0.63
SPARCL1-210ENST00000543631 CHADLQ6NUI6 762 aa11.06□□□□□ -0.64
SPARCL1-210ENST00000543631 PABPN1Q86U42 306 aaKnown RBP eCLIP11.05□□□□□ -0.64
SPARCL1-210ENST00000543631 CSRNP3Q8WYN3 585 aa11.05□□□□□ -0.64
SPARCL1-210ENST00000543631 GABBR2O75899 941 aa10.99□□□□□ -0.65
SPARCL1-210ENST00000543631 PRR29P0C7W0 189 aa10.96□□□□□ -0.65
SPARCL1-210ENST00000543631 FARP1Q9Y4F1 1045 aaPredicted RBP10.87□□□□□ -0.67
SPARCL1-210ENST00000543631 POTEIP0CG38 1075 aa10.85□□□□□ -0.67
SPARCL1-210ENST00000543631 CD44P16070 742 aaKnown RBP10.82□□□□□ -0.68
SPARCL1-210ENST00000543631 LHX8Q68G74 356 aa10.78□□□□□ -0.68
SPARCL1-210ENST00000543631 CREBZFQ9NS37 354 aa10.77□□□□□ -0.69
SPARCL1-210ENST00000543631 EHMT2Q96KQ7 1210 aa10.71□□□□□ -0.69
SPARCL1-210ENST00000543631 ZNF579Q8NAF0 562 aaKnown RBP10.7□□□□□ -0.7
SPARCL1-210ENST00000543631 SPDYE4A6NLX3 237 aa10.66□□□□□ -0.7
SPARCL1-210ENST00000543631 CLCN6P51797 869 aa10.65□□□□□ -0.7
SPARCL1-210ENST00000543631 STAG3Q9UJ98 1225 aa10.63□□□□□ -0.71
SPARCL1-210ENST00000543631 MNX1P50219 401 aaPredicted RBP10.62□□□□□ -0.71
SPARCL1-210ENST00000543631 ZRANB1Q9UGI0 708 aa10.62□□□□□ -0.71
SPARCL1-210ENST00000543631 GALR2O43603 387 aaPredicted RBP10.6□□□□□ -0.71
SPARCL1-210ENST00000543631 DCBLD2Q96PD2 775 aa10.54□□□□□ -0.72
SPARCL1-210ENST00000543631 PHF12Q96QT6 1004 aa10.53□□□□□ -0.72
SPARCL1-210ENST00000543631 PROM2Q8N271 834 aa10.52□□□□□ -0.73
SPARCL1-210ENST00000543631 POTEB2H3BUK9 544 aa10.49□□□□□ -0.73
SPARCL1-210ENST00000543631 PELP1Q8IZL8 1130 aaKnown RBP10.45□□□□□ -0.74
SPARCL1-210ENST00000543631 OTUD5Q96G74 571 aa10.45□□□□□ -0.74
SPARCL1-210ENST00000543631 NPM1P06748 294 aaKnown RBP eCLIP10.4□□□□□ -0.74
SPARCL1-210ENST00000543631 PAK3O75914 559 aaPredicted RBP10.39□□□□□ -0.75
SPARCL1-210ENST00000543631 MS4A3Q96HJ5 214 aa10.38□□□□□ -0.75
SPARCL1-210ENST00000543631 ASTLQ6HA08 431 aaPredicted RBP10.36□□□□□ -0.75
SPARCL1-210ENST00000543631 POTEJP0CG39 1038 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms