RNA–Protein interactions for RNA: ENST00000543455.1

TMED3-204, Transcript of transmembrane p24 trafficking protein 3, humanhuman

TSL 2

Gene TMED3, Length 1,483 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMED3-204ENST00000543455 PLEKHG1Q9ULL1 1385 aa28.1■■■□□ 2.09
TMED3-204ENST00000543455 CHGAP10645 457 aaKnown RBP28.1■■■□□ 2.09
TMED3-204ENST00000543455 CLTCL1P53675 1640 aa28.08■■■□□ 2.09
TMED3-204ENST00000543455 TRPM2O94759 1503 aa28.07■■■□□ 2.08
TMED3-204ENST00000543455 NWD1Q149M9 1564 aa28.07■■■□□ 2.08
TMED3-204ENST00000543455 SENP3Q9H4L4 574 aaPredicted RBP28.07■■■□□ 2.08
TMED3-204ENST00000543455 TOM1O60784 492 aa28.03■■■□□ 2.08
TMED3-204ENST00000543455 KCNA6P17658 529 aa28.03■■■□□ 2.08
TMED3-204ENST00000543455 NUTM2DQ5VT03 806 aaPredicted RBP28.03■■■□□ 2.08
TMED3-204ENST00000543455 TRIM52Q96A61 297 aa28.02■■■□□ 2.08
TMED3-204ENST00000543455 CHD2O14647 1828 aaKnown RBP28.02■■■□□ 2.08
TMED3-204ENST00000543455 ADAMTS13Q76LX8 1427 aa28.02■■■□□ 2.08
TMED3-204ENST00000543455 PPP1R15AO75807 674 aaPredicted RBP28.02■■■□□ 2.08
TMED3-204ENST00000543455 PIP4K2BP78356 416 aa28.01■■■□□ 2.07
TMED3-204ENST00000543455 ABCF1Q8NE71 845 aaKnown RBP eCLIP28.01■■■□□ 2.07
TMED3-204ENST00000543455 HDGFP51858 240 aaKnown RBP28■■■□□ 2.07
TMED3-204ENST00000543455 BCANQ96GW7 911 aa27.98■■■□□ 2.07
TMED3-204ENST00000543455 NKTRP30414 1462 aaKnown RBP27.98■■■□□ 2.07
TMED3-204ENST00000543455 TMEM94Q12767 1356 aa27.97■■■□□ 2.07
TMED3-204ENST00000543455 NRXN3Q9Y4C0 1643 aa27.97■■■□□ 2.07
TMED3-204ENST00000543455 SCAF1Q9H7N4 1312 aaKnown RBP27.96■■■□□ 2.07
TMED3-204ENST00000543455 DIP2AQ14689 1571 aa27.96■■■□□ 2.07
TMED3-204ENST00000543455 SLC4A1APQ9BWU0 796 aaKnown RBP27.95■■■□□ 2.07
TMED3-204ENST00000543455 TBX22Q9Y458 520 aa27.95■■■□□ 2.07
TMED3-204ENST00000543455 KIF1BO60333 1816 aa27.95■■■□□ 2.07
TMED3-204ENST00000543455 NEXMIFQ5QGS0 1516 aa27.94■■■□□ 2.06
TMED3-204ENST00000543455 HSPA1LP34931 641 aa27.94■■■□□ 2.06
TMED3-204ENST00000543455 RBM33Q96EV2 1170 aaKnown RBP27.93■■■□□ 2.06
TMED3-204ENST00000543455 PROSER2Q86WR7 435 aaPredicted RBP27.91■■■□□ 2.06
TMED3-204ENST00000543455 SETBP1Q9Y6X0 1596 aa27.91■■■□□ 2.06
TMED3-204ENST00000543455 FOXD1Q16676 465 aa27.89■■■□□ 2.06
TMED3-204ENST00000543455 ZNF326Q5BKZ1 582 aaKnown RBP27.88■■■□□ 2.05
TMED3-204ENST00000543455 PTPRUQ92729 1446 aa27.87■■■□□ 2.05
TMED3-204ENST00000543455 PIK3R4Q99570 1358 aa27.85■■■□□ 2.05
TMED3-204ENST00000543455 SETD5Q9C0A6 1442 aa27.85■■■□□ 2.05
TMED3-204ENST00000543455 MPHOSPH9Q99550 1183 aa27.83■■■□□ 2.05
TMED3-204ENST00000543455 XRN1Q8IZH2 1706 aaKnown RBP27.81■■■□□ 2.04
TMED3-204ENST00000543455 DISP3Q9P2K9 1392 aa27.81■■■□□ 2.04
TMED3-204ENST00000543455 PPLO60437 1756 aa27.79■■■□□ 2.04
TMED3-204ENST00000543455 METP08581 1390 aa27.78■■■□□ 2.04
TMED3-204ENST00000543455 SETD1AO15047 1707 aaKnown RBP27.77■■■□□ 2.04
TMED3-204ENST00000543455 RAB3GAP2Q9H2M9 1393 aa27.77■■■□□ 2.04
TMED3-204ENST00000543455 FAM135BQ49AJ0 1406 aa27.77■■■□□ 2.04
TMED3-204ENST00000543455 AMOTL2Q9Y2J4 779 aa27.76■■■□□ 2.04
TMED3-204ENST00000543455 NCOA3Q9Y6Q9 1424 aa27.76■■■□□ 2.03
TMED3-204ENST00000543455 MSH6P52701 1360 aa27.76■■■□□ 2.03
TMED3-204ENST00000543455 ROBO1Q9Y6N7 1651 aa27.75■■■□□ 2.03
TMED3-204ENST00000543455 SPATA31E1Q6ZUB1 1445 aa27.73■■■□□ 2.03
TMED3-204ENST00000543455 CCDC144AA2RUR9 1427 aa27.73■■■□□ 2.03
TMED3-204ENST00000543455 SIPA1L2Q9P2F8 1722 aaPredicted RBP27.72■■■□□ 2.03
TMED3-204ENST00000543455 RPGRIP1LQ68CZ1 1315 aa27.72■■■□□ 2.03
TMED3-204ENST00000543455 MED1Q15648 1581 aaPredicted RBP27.71■■■□□ 2.03
TMED3-204ENST00000543455 IFT172Q9UG01 1749 aa27.7■■■□□ 2.02
TMED3-204ENST00000543455 VGFO15240 615 aaPredicted RBP27.68■■■□□ 2.02
TMED3-204ENST00000543455 ILDR2Q71H61 639 aa27.68■■■□□ 2.02
TMED3-204ENST00000543455 ACIN1Q9UKV3 1341 aaKnown RBP27.67■■■□□ 2.02
TMED3-204ENST00000543455 SLAIN2Q9P270 581 aa27.66■■■□□ 2.02
TMED3-204ENST00000543455 C19orf44Q9H6X5 657 aa27.64■■■□□ 2.01
TMED3-204ENST00000543455 ADGRF5Q8IZF2 1346 aa27.62■■■□□ 2.01
TMED3-204ENST00000543455 C14orf37Q86TY3 774 aa27.62■■■□□ 2.01
TMED3-204ENST00000543455 RGL3Q3MIN7 710 aa27.61■■■□□ 2.01
TMED3-204ENST00000543455 NALCNQ8IZF0 1738 aa27.59■■■□□ 2.01
TMED3-204ENST00000543455 PRAG1Q86YV5 1406 aa27.59■■■□□ 2.01
TMED3-204ENST00000543455 DCCP43146 1447 aa27.58■■■□□ 2.01
TMED3-204ENST00000543455 CADPS2Q86UW7 1296 aa27.57■■■□□ 2
TMED3-204ENST00000543455 PTCH1Q13635 1447 aa27.56■■■□□ 2
TMED3-204ENST00000543455 PHLPP1O60346 1717 aa27.56■■■□□ 2
TMED3-204ENST00000543455 ANKRD30BQ9BXX2 1392 aa27.56■■■□□ 2
TMED3-204ENST00000543455 ROBO2Q9HCK4 1378 aa27.56■■■□□ 2
TMED3-204ENST00000543455 ADGRL3Q9HAR2 1447 aa27.56■■■□□ 2
TMED3-204ENST00000543455 ASXL1Q8IXJ9 1541 aa27.54■■■□□ 2
TMED3-204ENST00000543455 ATF3P18847 181 aa27.54■■■□□ 2
TMED3-204ENST00000543455 HRCP23327 699 aa27.54■■■□□ 2
TMED3-204ENST00000543455 COL16A1Q07092 1604 aaPredicted RBP27.53■■■□□ 2
TMED3-204ENST00000543455 PIK3C2GO75747 1445 aa27.53■■■□□ 2
TMED3-204ENST00000543455 MST1RQ04912 1400 aa27.53■■■□□ 2
TMED3-204ENST00000543455 AHDC1Q5TGY3 1603 aaPredicted RBP27.5■■□□□ 1.99
TMED3-204ENST00000543455 NRXN1Q9ULB1 1477 aa27.49■■□□□ 1.99
TMED3-204ENST00000543455 BRINP3Q76B58 766 aa27.47■■□□□ 1.99
TMED3-204ENST00000543455 MYOM2P54296 1465 aa27.46■■□□□ 1.99
TMED3-204ENST00000543455 TECPR2O15040 1411 aa27.43■■□□□ 1.98
TMED3-204ENST00000543455 KNDC1Q76NI1 1749 aa27.43■■□□□ 1.98
TMED3-204ENST00000543455 NHSL1Q5SYE7 1610 aa27.41■■□□□ 1.98
TMED3-204ENST00000543455 LRPPRCP42704 1394 aaKnown RBP27.41■■□□□ 1.98
TMED3-204ENST00000543455 TMEM132EQ6IEE7 984 aa27.41■■□□□ 1.98
TMED3-204ENST00000543455 JCADQ9P266 1359 aa27.4■■□□□ 1.98
TMED3-204ENST00000543455 C1orf167Q5SNV9 1468 aa27.38■■□□□ 1.97
TMED3-204ENST00000543455 ABCC11Q96J66 1382 aa27.38■■□□□ 1.97
TMED3-204ENST00000543455 C14orf93Q9H972 538 aaKnown RBP27.38■■□□□ 1.97
TMED3-204ENST00000543455 RGS17Q9UGC6 210 aaPredicted RBP27.38■■□□□ 1.97
TMED3-204ENST00000543455 LAMC1P11047 1609 aa27.37■■□□□ 1.97
TMED3-204ENST00000543455 STK26Q9P289 416 aa27.37■■□□□ 1.97
TMED3-204ENST00000543455 YTHDC2Q9H6S0 1430 aaKnown RBP27.36■■□□□ 1.97
TMED3-204ENST00000543455 PHF23Q9BUL5 403 aaPredicted RBP27.36■■□□□ 1.97
TMED3-204ENST00000543455 PLEKHH1Q9ULM0 1364 aa27.36■■□□□ 1.97
TMED3-204ENST00000543455 SHPRHQ149N8 1683 aa27.35■■□□□ 1.97
TMED3-204ENST00000543455 CFAP70Q5T0N1 1121 aa27.35■■□□□ 1.97
TMED3-204ENST00000543455 CDC42BPGQ6DT37 1551 aa27.35■■□□□ 1.97
TMED3-204ENST00000543455 SOCS7O14512 581 aa27.34■■□□□ 1.97
TMED3-204ENST00000543455 WAPLQ7Z5K2 1190 aa27.34■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 78.9 ms