RNA–Protein interactions for RNA: ENST00000543079.1

PAAF1-212, Transcript of proteasomal ATPase associated factor 1, humanhuman

TSL 3

Gene PAAF1, Length 390 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1-212ENST00000543079 PTGDRQ13258 359 aa12.52□□□□□ -0.41
PAAF1-212ENST00000543079 PADI6Q6TGC4 694 aa12.52□□□□□ -0.41
PAAF1-212ENST00000543079 WBP1LQ9NX94 342 aa12.52□□□□□ -0.41
PAAF1-212ENST00000543079 ARHGEF11O15085 1522 aa12.52□□□□□ -0.41
PAAF1-212ENST00000543079 HPS5Q9UPZ3 1129 aa12.5□□□□□ -0.41
PAAF1-212ENST00000543079 TESPA1A2RU30 521 aaPredicted RBP12.49□□□□□ -0.41
PAAF1-212ENST00000543079 SAMD7Q7Z3H4 446 aa12.49□□□□□ -0.41
PAAF1-212ENST00000543079 VSIG10Q8N0Z9 540 aa12.48□□□□□ -0.41
PAAF1-212ENST00000543079 NUTM2FA1L443 756 aa12.47□□□□□ -0.41
PAAF1-212ENST00000543079 HDGFP51858 240 aaKnown RBP12.46□□□□□ -0.41
PAAF1-212ENST00000543079 PPP4CP60510 307 aa12.46□□□□□ -0.41
PAAF1-212ENST00000543079 SMYD5Q6GMV2 418 aa12.46□□□□□ -0.41
PAAF1-212ENST00000543079 ITGBL1O95965 494 aaPredicted RBP12.45□□□□□ -0.42
PAAF1-212ENST00000543079 EYA1Q99502 592 aa12.44□□□□□ -0.42
PAAF1-212ENST00000543079 CEP164Q9UPV0 1460 aa12.42□□□□□ -0.42
PAAF1-212ENST00000543079 FCHSD2O94868 740 aa12.42□□□□□ -0.42
PAAF1-212ENST00000543079 PEG3Q9GZU2 1588 aa12.42□□□□□ -0.42
PAAF1-212ENST00000543079 MROH2BQ7Z745 1585 aa12.4□□□□□ -0.42
PAAF1-212ENST00000543079 RBM26Q5T8P6 1007 aaKnown RBP12.39□□□□□ -0.43
PAAF1-212ENST00000543079 SWT1Q5T5J6 900 aaKnown RBP12.38□□□□□ -0.43
PAAF1-212ENST00000543079 FANCD2Q9BXW9 1451 aa12.38□□□□□ -0.43
PAAF1-212ENST00000543079 A0A0G2JS52 829 aa12.37□□□□□ -0.43
PAAF1-212ENST00000543079 KCNC4Q03721 635 aa12.37□□□□□ -0.43
PAAF1-212ENST00000543079 RBM46Q8TBY0 533 aaKnown RBP12.37□□□□□ -0.43
PAAF1-212ENST00000543079 ADGRG1Q9Y653 693 aa12.37□□□□□ -0.43
PAAF1-212ENST00000543079 ARAP1Q96P48 1450 aa12.37□□□□□ -0.43
PAAF1-212ENST00000543079 SLF2Q8IX21 1173 aa12.36□□□□□ -0.43
PAAF1-212ENST00000543079 NECTIN2Q92692 538 aa12.36□□□□□ -0.43
PAAF1-212ENST00000543079 RSF1Q96T23 1441 aaPredicted RBP12.36□□□□□ -0.43
PAAF1-212ENST00000543079 HIC1Q14526 733 aa12.35□□□□□ -0.43
PAAF1-212ENST00000543079 RNF40O75150 1001 aa12.34□□□□□ -0.43
PAAF1-212ENST00000543079 RGS20O76081 388 aa12.33□□□□□ -0.44
PAAF1-212ENST00000543079 DNAJB2P25686 324 aa12.33□□□□□ -0.44
PAAF1-212ENST00000543079 SLC4A3P48751 1232 aa12.33□□□□□ -0.44
PAAF1-212ENST00000543079 URB2Q14146 1524 aaKnown RBP12.32□□□□□ -0.44
PAAF1-212ENST00000543079 ZNF608Q9ULD9 1512 aaPredicted RBP12.32□□□□□ -0.44
PAAF1-212ENST00000543079 FAM161AQ3B820 660 aa12.31□□□□□ -0.44
PAAF1-212ENST00000543079 TJAP1Q5JTD0 557 aa12.3□□□□□ -0.44
PAAF1-212ENST00000543079 TMEM134Q9H6X4 195 aa12.3□□□□□ -0.44
PAAF1-212ENST00000543079 RCCD1A6NED2 376 aa12.29□□□□□ -0.44
PAAF1-212ENST00000543079 GNPATO15228 680 aa12.29□□□□□ -0.44
PAAF1-212ENST00000543079 GPR37O15354 613 aa12.29□□□□□ -0.44
PAAF1-212ENST00000543079 OATP04181 439 aa12.29□□□□□ -0.44
PAAF1-212ENST00000543079 APLP1P51693 650 aa12.29□□□□□ -0.44
PAAF1-212ENST00000543079 PXYLP1Q8TE99 480 aa12.27□□□□□ -0.45
PAAF1-212ENST00000543079 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.26□□□□□ -0.45
PAAF1-212ENST00000543079 MTRQ99707 1265 aa12.26□□□□□ -0.45
PAAF1-212ENST00000543079 IL21Q9HBE4 155 aa12.26□□□□□ -0.45
PAAF1-212ENST00000543079 FECHP22830 423 aa12.25□□□□□ -0.45
PAAF1-212ENST00000543079 WIZO95785 1651 aa12.25□□□□□ -0.45
PAAF1-212ENST00000543079 CFTRP13569 1480 aa12.23□□□□□ -0.45
PAAF1-212ENST00000543079 GPIHBP1Q8IV16 184 aa12.23□□□□□ -0.45
PAAF1-212ENST00000543079 PRR14Q9BWN1 585 aa12.23□□□□□ -0.45
PAAF1-212ENST00000543079 IFT140Q96RY7 1462 aa12.22□□□□□ -0.45
PAAF1-212ENST00000543079 METTL3Q86U44 580 aaKnown RBP12.22□□□□□ -0.45
PAAF1-212ENST00000543079 TULP1O00294 542 aaPredicted RBP12.21□□□□□ -0.45
PAAF1-212ENST00000543079 ZNF516Q92618 1163 aa12.19□□□□□ -0.46
PAAF1-212ENST00000543079 SUPT5HO00267 1087 aaKnown RBP12.18□□□□□ -0.46
PAAF1-212ENST00000543079 SLC10A3P09131 477 aa12.16□□□□□ -0.46
PAAF1-212ENST00000543079 COPS2P61201 443 aa12.16□□□□□ -0.46
PAAF1-212ENST00000543079 ACTN4O43707 911 aaKnown RBP12.15□□□□□ -0.46
PAAF1-212ENST00000543079 KMT5BQ4FZB7 885 aa12.15□□□□□ -0.46
PAAF1-212ENST00000543079 PCDHB3Q9Y5E6 796 aa12.15□□□□□ -0.46
PAAF1-212ENST00000543079 AQRO60306 1485 aaKnown RBP eCLIP12.14□□□□□ -0.47
PAAF1-212ENST00000543079 TOP2AP11388 1531 aaKnown RBP12.13□□□□□ -0.47
PAAF1-212ENST00000543079 RSPH4AQ5TD94 716 aa12.13□□□□□ -0.47
PAAF1-212ENST00000543079 DAXXQ9UER7 740 aaPredicted RBP12.13□□□□□ -0.47
PAAF1-212ENST00000543079 ZPR1O75312 459 aa12.12□□□□□ -0.47
PAAF1-212ENST00000543079 CFHP08603 1231 aa12.12□□□□□ -0.47
PAAF1-212ENST00000543079 NKX2-3Q8TAU0 364 aa12.12□□□□□ -0.47
PAAF1-212ENST00000543079 PPP1R18Q6NYC8 613 aa12.11□□□□□ -0.47
PAAF1-212ENST00000543079 BLOC1S3Q6QNY0 202 aa12.11□□□□□ -0.47
PAAF1-212ENST00000543079 CHD1O14646 1710 aa12.09□□□□□ -0.47
PAAF1-212ENST00000543079 PHOX2BQ99453 314 aa12.09□□□□□ -0.47
PAAF1-212ENST00000543079 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.09□□□□□ -0.47
PAAF1-212ENST00000543079 EIF4G3O43432 1585 aaKnown RBP12.09□□□□□ -0.47
PAAF1-212ENST00000543079 MAP2K5Q13163 448 aa12.08□□□□□ -0.48
PAAF1-212ENST00000543079 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.08□□□□□ -0.48
PAAF1-212ENST00000543079 NLRP7Q8WX94 980 aa12.06□□□□□ -0.48
PAAF1-212ENST00000543079 IRX2Q9BZI1 471 aaPredicted RBP12.06□□□□□ -0.48
PAAF1-212ENST00000543079 TOPBP1Q92547 1522 aa12.06□□□□□ -0.48
PAAF1-212ENST00000543079 IRF6O14896 467 aa12.05□□□□□ -0.48
PAAF1-212ENST00000543079 GGCXP38435 758 aa12.04□□□□□ -0.48
PAAF1-212ENST00000543079 SULF1Q8IWU6 871 aa12.04□□□□□ -0.48
PAAF1-212ENST00000543079 CHMP7Q8WUX9 453 aaPredicted RBP12.04□□□□□ -0.48
PAAF1-212ENST00000543079 TMUB1Q9BVT8 246 aa12.04□□□□□ -0.48
PAAF1-212ENST00000543079 MINK1Q8N4C8 1332 aaPredicted RBP12.04□□□□□ -0.48
PAAF1-212ENST00000543079 DDX11L8A8MPP1 907 aa12.03□□□□□ -0.48
PAAF1-212ENST00000543079 RDH13Q8NBN7 331 aa12.03□□□□□ -0.48
PAAF1-212ENST00000543079 NR1I2O75469 434 aa12.02□□□□□ -0.49
PAAF1-212ENST00000543079 CCDC88BA6NC98 1476 aa12.02□□□□□ -0.49
PAAF1-212ENST00000543079 SLC24A1O60721 1099 aa12□□□□□ -0.49
PAAF1-212ENST00000543079 PRKD2Q9BZL6 878 aa12□□□□□ -0.49
PAAF1-212ENST00000543079 TDRD9Q8NDG6 1382 aaKnown RBP12□□□□□ -0.49
PAAF1-212ENST00000543079 GAPVD1Q14C86 1478 aa12□□□□□ -0.49
PAAF1-212ENST00000543079 CLASP1Q7Z460 1538 aa12□□□□□ -0.49
PAAF1-212ENST00000543079 GCGRP47871 477 aa11.99□□□□□ -0.49
PAAF1-212ENST00000543079 LMOD2Q6P5Q4 547 aa11.99□□□□□ -0.49
PAAF1-212ENST00000543079 SCUBE3Q8IX30 993 aa11.99□□□□□ -0.49
PAAF1-212ENST00000543079 V9GY48 417 aaPredicted RBP11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms