RNA–Protein interactions for RNA: ENST00000543079.1

PAAF1-212, Transcript of proteasomal ATPase associated factor 1, humanhuman

TSL 3

Gene PAAF1, Length 390 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1-212ENST00000543079 AEBP2Q6ZN18 517 aaPredicted RBP30.84■■■□□ 2.53
PAAF1-212ENST00000543079 CHIC1Q5VXU3 224 aa29.66■■■□□ 2.34
PAAF1-212ENST00000543079 SENP3Q9H4L4 574 aaPredicted RBP26.29■■□□□ 1.8
PAAF1-212ENST00000543079 PHF23Q9BUL5 403 aaPredicted RBP26.03■■□□□ 1.76
PAAF1-212ENST00000543079 FOXD1Q16676 465 aa24.44■■□□□ 1.5
PAAF1-212ENST00000543079 PLPPR3Q6T4P5 718 aa23.87■■□□□ 1.41
PAAF1-212ENST00000543079 PPP6R1Q9UPN7 881 aa23.13■■□□□ 1.29
PAAF1-212ENST00000543079 ADRA2BP18089 450 aa23.06■■□□□ 1.28
PAAF1-212ENST00000543079 PIAS4Q8N2W9 510 aaPredicted RBP22.91■■□□□ 1.26
PAAF1-212ENST00000543079 MSH5O43196 834 aa22.76■■□□□ 1.23
PAAF1-212ENST00000543079 POTEDQ86YR6 584 aa21.58■■□□□ 1.05
PAAF1-212ENST00000543079 SCAF1Q9H7N4 1312 aaKnown RBP21.15■□□□□ 0.98
PAAF1-212ENST00000543079 MAPK8IP2Q13387 824 aaPredicted RBP21.07■□□□□ 0.96
PAAF1-212ENST00000543079 PPP4R3CPQ6ZMV5 832 aa20.96■□□□□ 0.95
PAAF1-212ENST00000543079 DMRT2Q9Y5R5 561 aa20.91■□□□□ 0.94
PAAF1-212ENST00000543079 CNKSR2Q8WXI2 1034 aa20.5■□□□□ 0.87
PAAF1-212ENST00000543079 HOXD11P31277 338 aaPredicted RBP20.29■□□□□ 0.84
PAAF1-212ENST00000543079 NCBP3Q53F19 620 aaKnown RBP20.28■□□□□ 0.84
PAAF1-212ENST00000543079 RNF216Q9NWF9 866 aaPredicted RBP20.23■□□□□ 0.83
PAAF1-212ENST00000543079 DCAF8L1A6NGE4 600 aa19.98■□□□□ 0.79
PAAF1-212ENST00000543079 NPM3O75607 178 aaKnown RBP19.96■□□□□ 0.79
PAAF1-212ENST00000543079 KCNA4P22459 653 aa19.88■□□□□ 0.77
PAAF1-212ENST00000543079 DNAJC5BQ9UF47 199 aa19.56■□□□□ 0.72
PAAF1-212ENST00000543079 RNF39Q9H2S5 420 aa19.44■□□□□ 0.7
PAAF1-212ENST00000543079 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.3■□□□□ 0.68
PAAF1-212ENST00000543079 CACNB1Q02641 598 aaPredicted RBP19.28■□□□□ 0.68
PAAF1-212ENST00000543079 C1QBPQ07021 282 aaKnown RBP19.2■□□□□ 0.66
PAAF1-212ENST00000543079 SLC4A2P04920 1241 aa18.98■□□□□ 0.63
PAAF1-212ENST00000543079 U3KPZ7 1027 aaPredicted RBP18.93■□□□□ 0.62
PAAF1-212ENST00000543079 SLC4A1APQ9BWU0 796 aaKnown RBP18.85■□□□□ 0.61
PAAF1-212ENST00000543079 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.56■□□□□ 0.56
PAAF1-212ENST00000543079 HNRNPUL2Q1KMD3 747 aaKnown RBP18.56■□□□□ 0.56
PAAF1-212ENST00000543079 SPINK5Q9NQ38 1064 aaPredicted RBP18.54■□□□□ 0.56
PAAF1-212ENST00000543079 CAPN15O75808 1086 aa18.49■□□□□ 0.55
PAAF1-212ENST00000543079 APLP2Q06481 763 aa18.48■□□□□ 0.55
PAAF1-212ENST00000543079 FOXD4L1Q9NU39 408 aa18.47■□□□□ 0.55
PAAF1-212ENST00000543079 MYCNP04198 464 aaPredicted RBP18.46■□□□□ 0.55
PAAF1-212ENST00000543079 SAMD1Q6SPF0 538 aaPredicted RBP18.46■□□□□ 0.55
PAAF1-212ENST00000543079 DSG3P32926 999 aa18.33■□□□□ 0.52
PAAF1-212ENST00000543079 TRHP20396 242 aaPredicted RBP18.28■□□□□ 0.52
PAAF1-212ENST00000543079 ZNF219Q9P2Y4 722 aaPredicted RBP18.28■□□□□ 0.52
PAAF1-212ENST00000543079 ZBTB22O15209 634 aa18.27■□□□□ 0.52
PAAF1-212ENST00000543079 ABCB7O75027 752 aa18.07■□□□□ 0.48
PAAF1-212ENST00000543079 ATF5Q9Y2D1 282 aaPredicted RBP17.98■□□□□ 0.47
PAAF1-212ENST00000543079 ATXN8OSP0DMR3 200 aa17.9■□□□□ 0.46
PAAF1-212ENST00000543079 POLA2Q14181 598 aa17.9■□□□□ 0.46
PAAF1-212ENST00000543079 CSRNP3Q8WYN3 585 aa17.79■□□□□ 0.44
PAAF1-212ENST00000543079 EHMT2Q96KQ7 1210 aa17.69■□□□□ 0.42
PAAF1-212ENST00000543079 ZBTB12Q9Y330 459 aaPredicted RBP17.58■□□□□ 0.4
PAAF1-212ENST00000543079 RBM42Q9BTD8 480 aaKnown RBP17.49■□□□□ 0.39
PAAF1-212ENST00000543079 FBLN2P98095 1184 aa17.28■□□□□ 0.36
PAAF1-212ENST00000543079 OSCARQ8IYS5 282 aa17.27■□□□□ 0.36
PAAF1-212ENST00000543079 MKRN4PQ13434 485 aaPredicted RBP17.19■□□□□ 0.34
PAAF1-212ENST00000543079 AKT1S1Q96B36 256 aa17.17■□□□□ 0.34
PAAF1-212ENST00000543079 SPDYE2BA6NHP3 402 aa17.06■□□□□ 0.32
PAAF1-212ENST00000543079 SPDYE6P0CI01 402 aa17.06■□□□□ 0.32
PAAF1-212ENST00000543079 SPDYE2Q495Y8 402 aa17.06■□□□□ 0.32
PAAF1-212ENST00000543079 REM2Q8IYK8 340 aaPredicted RBP16.99■□□□□ 0.31
PAAF1-212ENST00000543079 POTEHQ6S545 545 aa16.98■□□□□ 0.31
PAAF1-212ENST00000543079 CHRDL2Q6WN34 429 aa16.94■□□□□ 0.3
PAAF1-212ENST00000543079 ZNF692Q9BU19 519 aaPredicted RBP16.91■□□□□ 0.3
PAAF1-212ENST00000543079 SSUH2Q9Y2M2 353 aa16.87■□□□□ 0.29
PAAF1-212ENST00000543079 PITPNM1O00562 1244 aa16.78■□□□□ 0.28
PAAF1-212ENST00000543079 SPDYE1Q8NFV5 336 aaPredicted RBP16.67■□□□□ 0.26
PAAF1-212ENST00000543079 PABPN1Q86U42 306 aaKnown RBP eCLIP16.66■□□□□ 0.26
PAAF1-212ENST00000543079 PIP4P2Q8N4L2 257 aa16.61■□□□□ 0.25
PAAF1-212ENST00000543079 FXR2P51116 673 aaKnown RBP eCLIP16.6■□□□□ 0.25
PAAF1-212ENST00000543079 CLEC11AQ9Y240 323 aa16.59■□□□□ 0.25
PAAF1-212ENST00000543079 SPDYE4A6NLX3 237 aa16.57■□□□□ 0.24
PAAF1-212ENST00000543079 PRR29P0C7W0 189 aa16.4■□□□□ 0.22
PAAF1-212ENST00000543079 PRKAR2AP13861 404 aaKnown RBP16.37■□□□□ 0.21
PAAF1-212ENST00000543079 STAG3Q9UJ98 1225 aa16.32■□□□□ 0.2
PAAF1-212ENST00000543079 PROM2Q8N271 834 aa16.24■□□□□ 0.19
PAAF1-212ENST00000543079 CHADLQ6NUI6 762 aa16.23■□□□□ 0.19
PAAF1-212ENST00000543079 HAX1O00165 279 aa16.21■□□□□ 0.19
PAAF1-212ENST00000543079 SP7Q8TDD2 431 aaPredicted RBP16.09■□□□□ 0.17
PAAF1-212ENST00000543079 FKBP8Q14318 412 aa16.08■□□□□ 0.16
PAAF1-212ENST00000543079 CREBZFQ9NS37 354 aa16.07■□□□□ 0.16
PAAF1-212ENST00000543079 FARP1Q9Y4F1 1045 aaPredicted RBP16.07■□□□□ 0.16
PAAF1-212ENST00000543079 NISCHQ9Y2I1 1504 aa16.07■□□□□ 0.16
PAAF1-212ENST00000543079 C19orf67A6NJJ6 358 aa16.05■□□□□ 0.16
PAAF1-212ENST00000543079 EVX2Q03828 476 aa16.04■□□□□ 0.16
PAAF1-212ENST00000543079 CD44P16070 742 aaKnown RBP15.85■□□□□ 0.13
PAAF1-212ENST00000543079 MNX1P50219 401 aaPredicted RBP15.85■□□□□ 0.13
PAAF1-212ENST00000543079 NPM1P06748 294 aaKnown RBP eCLIP15.8■□□□□ 0.12
PAAF1-212ENST00000543079 MIER1Q8N108 512 aa15.78■□□□□ 0.12
PAAF1-212ENST00000543079 PLEKHG5O94827 1062 aa15.74■□□□□ 0.11
PAAF1-212ENST00000543079 GABBR2O75899 941 aa15.72■□□□□ 0.11
PAAF1-212ENST00000543079 ZRANB1Q9UGI0 708 aa15.7■□□□□ 0.1
PAAF1-212ENST00000543079 FBXO3Q9UK99 471 aa15.69■□□□□ 0.1
PAAF1-212ENST00000543079 PLCD3Q8N3E9 789 aa15.67■□□□□ 0.1
PAAF1-212ENST00000543079 CLCN6P51797 869 aa15.66■□□□□ 0.1
PAAF1-212ENST00000543079 PAK3O75914 559 aaPredicted RBP15.65■□□□□ 0.1
PAAF1-212ENST00000543079 ZNF579Q8NAF0 562 aaKnown RBP15.65■□□□□ 0.1
PAAF1-212ENST00000543079 ZBTB47Q9UFB7 747 aaPredicted RBP15.57■□□□□ 0.08
PAAF1-212ENST00000543079 TSPYL2Q9H2G4 693 aaPredicted RBP15.5■□□□□ 0.07
PAAF1-212ENST00000543079 PHF12Q96QT6 1004 aa15.48■□□□□ 0.07
PAAF1-212ENST00000543079 VASPP50552 380 aaPredicted RBP15.46■□□□□ 0.07
PAAF1-212ENST00000543079 RASEFQ8IZ41 740 aa15.46■□□□□ 0.07
PAAF1-212ENST00000543079 NUBP1P53384 320 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms