RNA–Protein interactions for RNA: ENST00000542761.5

PTPN6-218, Transcript of protein tyrosine phosphatase, non-receptor type 6, humanhuman

TSL 2

Gene PTPN6, Length 795 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6-218ENST00000542761 TRIM52Q96A61 297 aa25.42■■□□□ 1.66
PTPN6-218ENST00000542761 PPP1R15AO75807 674 aaPredicted RBP25.4■■□□□ 1.66
PTPN6-218ENST00000542761 BCANQ96GW7 911 aa25.4■■□□□ 1.66
PTPN6-218ENST00000542761 PLEKHG1Q9ULL1 1385 aa25.39■■□□□ 1.65
PTPN6-218ENST00000542761 CLTCL1P53675 1640 aa25.37■■□□□ 1.65
PTPN6-218ENST00000542761 XIRP1Q702N8 1843 aaKnown RBP25.37■■□□□ 1.65
PTPN6-218ENST00000542761 NUTM2DQ5VT03 806 aaPredicted RBP25.37■■□□□ 1.65
PTPN6-218ENST00000542761 ALKQ9UM73 1620 aa25.37■■□□□ 1.65
PTPN6-218ENST00000542761 TRPM2O94759 1503 aa25.37■■□□□ 1.65
PTPN6-218ENST00000542761 SCAF1Q9H7N4 1312 aaKnown RBP25.37■■□□□ 1.65
PTPN6-218ENST00000542761 TOM1O60784 492 aa25.36■■□□□ 1.65
PTPN6-218ENST00000542761 HDGFP51858 240 aaKnown RBP25.36■■□□□ 1.65
PTPN6-218ENST00000542761 PIP4K2BP78356 416 aa25.35■■□□□ 1.65
PTPN6-218ENST00000542761 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.35■■□□□ 1.65
PTPN6-218ENST00000542761 NWD1Q149M9 1564 aa25.33■■□□□ 1.65
PTPN6-218ENST00000542761 KCNA6P17658 529 aa25.32■■□□□ 1.64
PTPN6-218ENST00000542761 SLC4A1APQ9BWU0 796 aaKnown RBP25.32■■□□□ 1.64
PTPN6-218ENST00000542761 KIF1BO60333 1816 aa25.3■■□□□ 1.64
PTPN6-218ENST00000542761 CHD2O14647 1828 aaKnown RBP25.29■■□□□ 1.64
PTPN6-218ENST00000542761 ZNF326Q5BKZ1 582 aaKnown RBP25.28■■□□□ 1.64
PTPN6-218ENST00000542761 TMEM94Q12767 1356 aa25.28■■□□□ 1.64
PTPN6-218ENST00000542761 ADAMTS13Q76LX8 1427 aa25.28■■□□□ 1.64
PTPN6-218ENST00000542761 NKTRP30414 1462 aaKnown RBP25.28■■□□□ 1.64
PTPN6-218ENST00000542761 DIP2AQ14689 1571 aa25.27■■□□□ 1.64
PTPN6-218ENST00000542761 PROSER2Q86WR7 435 aaPredicted RBP25.25■■□□□ 1.63
PTPN6-218ENST00000542761 RBM33Q96EV2 1170 aaKnown RBP25.25■■□□□ 1.63
PTPN6-218ENST00000542761 TBX22Q9Y458 520 aa25.24■■□□□ 1.63
PTPN6-218ENST00000542761 NEXMIFQ5QGS0 1516 aa25.23■■□□□ 1.63
PTPN6-218ENST00000542761 NRXN3Q9Y4C0 1643 aa25.23■■□□□ 1.63
PTPN6-218ENST00000542761 HSPA1LP34931 641 aa25.22■■□□□ 1.63
PTPN6-218ENST00000542761 FOXD1Q16676 465 aa25.22■■□□□ 1.63
PTPN6-218ENST00000542761 SETD5Q9C0A6 1442 aa25.2■■□□□ 1.62
PTPN6-218ENST00000542761 SETBP1Q9Y6X0 1596 aa25.19■■□□□ 1.62
PTPN6-218ENST00000542761 MPHOSPH9Q99550 1183 aa25.17■■□□□ 1.62
PTPN6-218ENST00000542761 PIK3R4Q99570 1358 aa25.17■■□□□ 1.62
PTPN6-218ENST00000542761 DISP3Q9P2K9 1392 aa25.15■■□□□ 1.62
PTPN6-218ENST00000542761 PTPRUQ92729 1446 aa25.14■■□□□ 1.62
PTPN6-218ENST00000542761 RAB3GAP2Q9H2M9 1393 aa25.13■■□□□ 1.61
PTPN6-218ENST00000542761 MSH6P52701 1360 aa25.12■■□□□ 1.61
PTPN6-218ENST00000542761 CCDC144AA2RUR9 1427 aa25.12■■□□□ 1.61
PTPN6-218ENST00000542761 PPLO60437 1756 aa25.1■■□□□ 1.61
PTPN6-218ENST00000542761 XRN1Q8IZH2 1706 aaKnown RBP25.1■■□□□ 1.61
PTPN6-218ENST00000542761 AMOTL2Q9Y2J4 779 aa25.1■■□□□ 1.61
PTPN6-218ENST00000542761 METP08581 1390 aa25.08■■□□□ 1.61
PTPN6-218ENST00000542761 ROBO1Q9Y6N7 1651 aa25.07■■□□□ 1.6
PTPN6-218ENST00000542761 ACIN1Q9UKV3 1341 aaKnown RBP25.07■■□□□ 1.6
PTPN6-218ENST00000542761 C14orf37Q86TY3 774 aa25.06■■□□□ 1.6
PTPN6-218ENST00000542761 FAM135BQ49AJ0 1406 aa25.05■■□□□ 1.6
PTPN6-218ENST00000542761 NCOA3Q9Y6Q9 1424 aa25.05■■□□□ 1.6
PTPN6-218ENST00000542761 SETD1AO15047 1707 aaKnown RBP25.05■■□□□ 1.6
PTPN6-218ENST00000542761 RPGRIP1LQ68CZ1 1315 aa25.05■■□□□ 1.6
PTPN6-218ENST00000542761 VGFO15240 615 aaPredicted RBP25.04■■□□□ 1.6
PTPN6-218ENST00000542761 SIPA1L2Q9P2F8 1722 aaPredicted RBP25.03■■□□□ 1.6
PTPN6-218ENST00000542761 SPATA31E1Q6ZUB1 1445 aa25.03■■□□□ 1.6
PTPN6-218ENST00000542761 MED1Q15648 1581 aaPredicted RBP25.02■■□□□ 1.6
PTPN6-218ENST00000542761 IFT172Q9UG01 1749 aa25.01■■□□□ 1.59
PTPN6-218ENST00000542761 RGL3Q3MIN7 710 aa25.01■■□□□ 1.59
PTPN6-218ENST00000542761 SLAIN2Q9P270 581 aa24.99■■□□□ 1.59
PTPN6-218ENST00000542761 C19orf44Q9H6X5 657 aa24.97■■□□□ 1.59
PTPN6-218ENST00000542761 ADGRF5Q8IZF2 1346 aa24.95■■□□□ 1.58
PTPN6-218ENST00000542761 ATF3P18847 181 aa24.94■■□□□ 1.58
PTPN6-218ENST00000542761 CADPS2Q86UW7 1296 aa24.94■■□□□ 1.58
PTPN6-218ENST00000542761 NALCNQ8IZF0 1738 aa24.93■■□□□ 1.58
PTPN6-218ENST00000542761 ILDR2Q71H61 639 aa24.93■■□□□ 1.58
PTPN6-218ENST00000542761 PHLPP1O60346 1717 aa24.92■■□□□ 1.58
PTPN6-218ENST00000542761 ANKRD30BQ9BXX2 1392 aa24.92■■□□□ 1.58
PTPN6-218ENST00000542761 DCCP43146 1447 aa24.91■■□□□ 1.58
PTPN6-218ENST00000542761 PTCH1Q13635 1447 aa24.9■■□□□ 1.58
PTPN6-218ENST00000542761 ADGRL3Q9HAR2 1447 aa24.9■■□□□ 1.58
PTPN6-218ENST00000542761 ROBO2Q9HCK4 1378 aa24.89■■□□□ 1.57
PTPN6-218ENST00000542761 HRCP23327 699 aa24.87■■□□□ 1.57
PTPN6-218ENST00000542761 PIK3C2GO75747 1445 aa24.86■■□□□ 1.57
PTPN6-218ENST00000542761 PRAG1Q86YV5 1406 aa24.86■■□□□ 1.57
PTPN6-218ENST00000542761 COL16A1Q07092 1604 aaPredicted RBP24.85■■□□□ 1.57
PTPN6-218ENST00000542761 ASXL1Q8IXJ9 1541 aa24.85■■□□□ 1.57
PTPN6-218ENST00000542761 MST1RQ04912 1400 aa24.85■■□□□ 1.57
PTPN6-218ENST00000542761 AHDC1Q5TGY3 1603 aaPredicted RBP24.83■■□□□ 1.56
PTPN6-218ENST00000542761 MYOM2P54296 1465 aa24.82■■□□□ 1.56
PTPN6-218ENST00000542761 BRINP3Q76B58 766 aa24.81■■□□□ 1.56
PTPN6-218ENST00000542761 PHF23Q9BUL5 403 aaPredicted RBP24.81■■□□□ 1.56
PTPN6-218ENST00000542761 NRXN1Q9ULB1 1477 aa24.79■■□□□ 1.56
PTPN6-218ENST00000542761 TMEM132EQ6IEE7 984 aa24.79■■□□□ 1.56
PTPN6-218ENST00000542761 STK26Q9P289 416 aa24.79■■□□□ 1.56
PTPN6-218ENST00000542761 KNDC1Q76NI1 1749 aa24.78■■□□□ 1.56
PTPN6-218ENST00000542761 LRPPRCP42704 1394 aaKnown RBP24.78■■□□□ 1.56
PTPN6-218ENST00000542761 LAMC1P11047 1609 aa24.77■■□□□ 1.56
PTPN6-218ENST00000542761 JCADQ9P266 1359 aa24.77■■□□□ 1.56
PTPN6-218ENST00000542761 TECPR2O15040 1411 aa24.76■■□□□ 1.55
PTPN6-218ENST00000542761 NHSL1Q5SYE7 1610 aa24.75■■□□□ 1.55
PTPN6-218ENST00000542761 YTHDC2Q9H6S0 1430 aaKnown RBP24.74■■□□□ 1.55
PTPN6-218ENST00000542761 C1orf167Q5SNV9 1468 aa24.73■■□□□ 1.55
PTPN6-218ENST00000542761 CFAP70Q5T0N1 1121 aa24.73■■□□□ 1.55
PTPN6-218ENST00000542761 C14orf93Q9H972 538 aaKnown RBP24.73■■□□□ 1.55
PTPN6-218ENST00000542761 ABCC11Q96J66 1382 aa24.72■■□□□ 1.55
PTPN6-218ENST00000542761 CDC42BPGQ6DT37 1551 aa24.71■■□□□ 1.55
PTPN6-218ENST00000542761 WAPLQ7Z5K2 1190 aa24.71■■□□□ 1.55
PTPN6-218ENST00000542761 PLEKHH1Q9ULM0 1364 aa24.7■■□□□ 1.55
PTPN6-218ENST00000542761 SHPRHQ149N8 1683 aa24.7■■□□□ 1.54
PTPN6-218ENST00000542761 DCAF11Q8TEB1 546 aa24.68■■□□□ 1.54
PTPN6-218ENST00000542761 DDX17Q92841 729 aaKnown RBP24.68■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms