RNA–Protein interactions for RNA: ENST00000534683.1

RDX-217, Transcript of radixin, humanhuman

TSL 4

Gene RDX, Length 562 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDX-217ENST00000534683 SPHKAPQ2M3C7 1700 aa24.94■■□□□ 1.58
RDX-217ENST00000534683 HDGFP51858 240 aaKnown RBP24.92■■□□□ 1.58
RDX-217ENST00000534683 CHGAP10645 457 aaKnown RBP24.91■■□□□ 1.58
RDX-217ENST00000534683 KCNA6P17658 529 aa24.91■■□□□ 1.58
RDX-217ENST00000534683 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.9■■□□□ 1.58
RDX-217ENST00000534683 XIRP1Q702N8 1843 aaKnown RBP24.9■■□□□ 1.58
RDX-217ENST00000534683 NWD1Q149M9 1564 aa24.89■■□□□ 1.58
RDX-217ENST00000534683 TRPM2O94759 1503 aa24.87■■□□□ 1.57
RDX-217ENST00000534683 PPP1R15AO75807 674 aaPredicted RBP24.87■■□□□ 1.57
RDX-217ENST00000534683 PIP4K2BP78356 416 aa24.87■■□□□ 1.57
RDX-217ENST00000534683 NKTRP30414 1462 aaKnown RBP24.85■■□□□ 1.57
RDX-217ENST00000534683 ADAMTS13Q76LX8 1427 aa24.85■■□□□ 1.57
RDX-217ENST00000534683 CLTCL1P53675 1640 aa24.84■■□□□ 1.57
RDX-217ENST00000534683 BCANQ96GW7 911 aa24.84■■□□□ 1.57
RDX-217ENST00000534683 TBX22Q9Y458 520 aa24.84■■□□□ 1.57
RDX-217ENST00000534683 TMEM94Q12767 1356 aa24.83■■□□□ 1.57
RDX-217ENST00000534683 SCAF1Q9H7N4 1312 aaKnown RBP24.83■■□□□ 1.56
RDX-217ENST00000534683 HSPA1LP34931 641 aa24.82■■□□□ 1.56
RDX-217ENST00000534683 NUTM2DQ5VT03 806 aaPredicted RBP24.82■■□□□ 1.56
RDX-217ENST00000534683 TRIM52Q96A61 297 aa24.82■■□□□ 1.56
RDX-217ENST00000534683 CHD2O14647 1828 aaKnown RBP24.82■■□□□ 1.56
RDX-217ENST00000534683 DIP2AQ14689 1571 aa24.81■■□□□ 1.56
RDX-217ENST00000534683 SENP3Q9H4L4 574 aaPredicted RBP24.81■■□□□ 1.56
RDX-217ENST00000534683 PROSER2Q86WR7 435 aaPredicted RBP24.78■■□□□ 1.56
RDX-217ENST00000534683 SLC4A1APQ9BWU0 796 aaKnown RBP24.78■■□□□ 1.56
RDX-217ENST00000534683 PIK3R4Q99570 1358 aa24.77■■□□□ 1.56
RDX-217ENST00000534683 NRXN3Q9Y4C0 1643 aa24.75■■□□□ 1.55
RDX-217ENST00000534683 NEXMIFQ5QGS0 1516 aa24.75■■□□□ 1.55
RDX-217ENST00000534683 SETBP1Q9Y6X0 1596 aa24.75■■□□□ 1.55
RDX-217ENST00000534683 RBM33Q96EV2 1170 aaKnown RBP24.74■■□□□ 1.55
RDX-217ENST00000534683 DISP3Q9P2K9 1392 aa24.74■■□□□ 1.55
RDX-217ENST00000534683 ZNF326Q5BKZ1 582 aaKnown RBP24.73■■□□□ 1.55
RDX-217ENST00000534683 KIF1BO60333 1816 aa24.72■■□□□ 1.55
RDX-217ENST00000534683 FAM135BQ49AJ0 1406 aa24.69■■□□□ 1.54
RDX-217ENST00000534683 PTPRUQ92729 1446 aa24.69■■□□□ 1.54
RDX-217ENST00000534683 NCOA3Q9Y6Q9 1424 aa24.69■■□□□ 1.54
RDX-217ENST00000534683 SETD5Q9C0A6 1442 aa24.68■■□□□ 1.54
RDX-217ENST00000534683 FOXD1Q16676 465 aa24.67■■□□□ 1.54
RDX-217ENST00000534683 MSH6P52701 1360 aa24.67■■□□□ 1.54
RDX-217ENST00000534683 MPHOSPH9Q99550 1183 aa24.66■■□□□ 1.54
RDX-217ENST00000534683 AMOTL2Q9Y2J4 779 aa24.65■■□□□ 1.54
RDX-217ENST00000534683 ACIN1Q9UKV3 1341 aaKnown RBP24.64■■□□□ 1.54
RDX-217ENST00000534683 XRN1Q8IZH2 1706 aaKnown RBP24.64■■□□□ 1.54
RDX-217ENST00000534683 METP08581 1390 aa24.64■■□□□ 1.53
RDX-217ENST00000534683 RPGRIP1LQ68CZ1 1315 aa24.63■■□□□ 1.53
RDX-217ENST00000534683 ROBO1Q9Y6N7 1651 aa24.6■■□□□ 1.53
RDX-217ENST00000534683 VGFO15240 615 aaPredicted RBP24.6■■□□□ 1.53
RDX-217ENST00000534683 MED1Q15648 1581 aaPredicted RBP24.59■■□□□ 1.53
RDX-217ENST00000534683 ILDR2Q71H61 639 aa24.59■■□□□ 1.53
RDX-217ENST00000534683 CCDC144AA2RUR9 1427 aa24.59■■□□□ 1.53
RDX-217ENST00000534683 RAB3GAP2Q9H2M9 1393 aa24.58■■□□□ 1.53
RDX-217ENST00000534683 PPLO60437 1756 aa24.58■■□□□ 1.53
RDX-217ENST00000534683 SLAIN2Q9P270 581 aa24.58■■□□□ 1.53
RDX-217ENST00000534683 SPATA31E1Q6ZUB1 1445 aa24.58■■□□□ 1.53
RDX-217ENST00000534683 SETD1AO15047 1707 aaKnown RBP24.57■■□□□ 1.52
RDX-217ENST00000534683 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.56■■□□□ 1.52
RDX-217ENST00000534683 C19orf44Q9H6X5 657 aa24.56■■□□□ 1.52
RDX-217ENST00000534683 C14orf37Q86TY3 774 aa24.52■■□□□ 1.52
RDX-217ENST00000534683 CADPS2Q86UW7 1296 aa24.52■■□□□ 1.52
RDX-217ENST00000534683 DCCP43146 1447 aa24.52■■□□□ 1.52
RDX-217ENST00000534683 PRAG1Q86YV5 1406 aa24.51■■□□□ 1.51
RDX-217ENST00000534683 IFT172Q9UG01 1749 aa24.49■■□□□ 1.51
RDX-217ENST00000534683 ATF3P18847 181 aa24.48■■□□□ 1.51
RDX-217ENST00000534683 PTCH1Q13635 1447 aa24.48■■□□□ 1.51
RDX-217ENST00000534683 ADGRF5Q8IZF2 1346 aa24.47■■□□□ 1.51
RDX-217ENST00000534683 ANKRD30BQ9BXX2 1392 aa24.46■■□□□ 1.51
RDX-217ENST00000534683 HRCP23327 699 aa24.46■■□□□ 1.51
RDX-217ENST00000534683 RGL3Q3MIN7 710 aa24.46■■□□□ 1.51
RDX-217ENST00000534683 ADGRL3Q9HAR2 1447 aa24.45■■□□□ 1.51
RDX-217ENST00000534683 ROBO2Q9HCK4 1378 aa24.43■■□□□ 1.5
RDX-217ENST00000534683 PHLPP1O60346 1717 aa24.43■■□□□ 1.5
RDX-217ENST00000534683 NALCNQ8IZF0 1738 aa24.42■■□□□ 1.5
RDX-217ENST00000534683 MST1RQ04912 1400 aa24.42■■□□□ 1.5
RDX-217ENST00000534683 COL16A1Q07092 1604 aaPredicted RBP24.41■■□□□ 1.5
RDX-217ENST00000534683 AHDC1Q5TGY3 1603 aaPredicted RBP24.41■■□□□ 1.5
RDX-217ENST00000534683 PIK3C2GO75747 1445 aa24.41■■□□□ 1.5
RDX-217ENST00000534683 BRINP3Q76B58 766 aa24.39■■□□□ 1.49
RDX-217ENST00000534683 NRXN1Q9ULB1 1477 aa24.38■■□□□ 1.49
RDX-217ENST00000534683 ASXL1Q8IXJ9 1541 aa24.37■■□□□ 1.49
RDX-217ENST00000534683 SOCS7O14512 581 aa24.36■■□□□ 1.49
RDX-217ENST00000534683 JCADQ9P266 1359 aa24.36■■□□□ 1.49
RDX-217ENST00000534683 TECPR2O15040 1411 aa24.35■■□□□ 1.49
RDX-217ENST00000534683 MYOM2P54296 1465 aa24.35■■□□□ 1.49
RDX-217ENST00000534683 PHF23Q9BUL5 403 aaPredicted RBP24.34■■□□□ 1.49
RDX-217ENST00000534683 LRPPRCP42704 1394 aaKnown RBP24.32■■□□□ 1.48
RDX-217ENST00000534683 ABCC11Q96J66 1382 aa24.31■■□□□ 1.48
RDX-217ENST00000534683 RGS17Q9UGC6 210 aaPredicted RBP24.31■■□□□ 1.48
RDX-217ENST00000534683 NHSL1Q5SYE7 1610 aa24.3■■□□□ 1.48
RDX-217ENST00000534683 C1orf167Q5SNV9 1468 aa24.3■■□□□ 1.48
RDX-217ENST00000534683 C14orf93Q9H972 538 aaKnown RBP24.29■■□□□ 1.48
RDX-217ENST00000534683 KNDC1Q76NI1 1749 aa24.29■■□□□ 1.48
RDX-217ENST00000534683 TMEM132EQ6IEE7 984 aa24.28■■□□□ 1.48
RDX-217ENST00000534683 SHPRHQ149N8 1683 aa24.27■■□□□ 1.48
RDX-217ENST00000534683 YTHDC2Q9H6S0 1430 aaKnown RBP24.27■■□□□ 1.48
RDX-217ENST00000534683 CDC42BPGQ6DT37 1551 aa24.25■■□□□ 1.47
RDX-217ENST00000534683 LAMC1P11047 1609 aa24.25■■□□□ 1.47
RDX-217ENST00000534683 STK26Q9P289 416 aa24.25■■□□□ 1.47
RDX-217ENST00000534683 SPATA31A6Q5VVP1 1343 aa24.25■■□□□ 1.47
RDX-217ENST00000534683 CFAP70Q5T0N1 1121 aa24.24■■□□□ 1.47
RDX-217ENST00000534683 WAPLQ7Z5K2 1190 aa24.23■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms