RNA–Protein interactions for RNA: ENST00000531867.1

PUM1-222, Transcript of pumilio RNA binding family member 1, human

TSL 4

Gene PUM1, Length 549 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PUM1-222	ENST00000531867	NBPF26	B4DH59	902 aa		10.82	□□□□□ -0.68
PUM1-222	ENST00000531867	TSKS	Q9UJT2	592 aa		10.82	□□□□□ -0.68
PUM1-222	ENST00000531867	DNMBP	Q6XZF7	1577 aa		10.82	□□□□□ -0.68
PUM1-222	ENST00000531867	PTGDR	Q13258	359 aa		10.81	□□□□□ -0.68
PUM1-222	ENST00000531867	NPDC1	Q9NQX5	325 aa	Predicted RBP	10.81	□□□□□ -0.68
PUM1-222	ENST00000531867	FCHSD2	O94868	740 aa		10.79	□□□□□ -0.68
PUM1-222	ENST00000531867	FAM98C	Q17RN3	349 aa	Known RBP	10.79	□□□□□ -0.68
PUM1-222	ENST00000531867	KCTD12	Q96CX2	325 aa	Known RBP	10.79	□□□□□ -0.68
PUM1-222	ENST00000531867	PADI6	Q6TGC4	694 aa		10.78	□□□□□ -0.68
PUM1-222	ENST00000531867	TTC13	Q8NBP0	860 aa		10.78	□□□□□ -0.68
PUM1-222	ENST00000531867	WNT2B	Q93097	391 aa		10.78	□□□□□ -0.68
PUM1-222	ENST00000531867	RBM26	Q5T8P6	1007 aa	Known RBP	10.77	□□□□□ -0.69
PUM1-222	ENST00000531867	ANKK1	Q8NFD2	765 aa		10.77	□□□□□ -0.69
PUM1-222	ENST00000531867	HCST	Q9UBK5	93 aa		10.77	□□□□□ -0.69
PUM1-222	ENST00000531867	SEPT9	Q9UHD8	586 aa	Predicted RBP	10.77	□□□□□ -0.69
PUM1-222	ENST00000531867	CCDC88B	A6NC98	1476 aa		10.76	□□□□□ -0.69
PUM1-222	ENST00000531867	POLA1	P09884	1462 aa	Predicted RBP	10.75	□□□□□ -0.69
PUM1-222	ENST00000531867	HIC1	Q14526	733 aa		10.75	□□□□□ -0.69
PUM1-222	ENST00000531867	TATDN2	Q93075	761 aa		10.75	□□□□□ -0.69
PUM1-222	ENST00000531867	ZFR	Q96KR1	1074 aa	Known RBP	10.75	□□□□□ -0.69
PUM1-222	ENST00000531867	FAM198A	Q9UFP1	575 aa		10.75	□□□□□ -0.69
PUM1-222	ENST00000531867	SYNJ1	O43426	1573 aa		10.74	□□□□□ -0.69
PUM1-222	ENST00000531867	THSD4	Q6ZMP0	1018 aa		10.74	□□□□□ -0.69
PUM1-222	ENST00000531867	PNMA3	Q9UL41	463 aa		10.74	□□□□□ -0.69
PUM1-222	ENST00000531867	WDR97	A6NE52	1622 aa		10.73	□□□□□ -0.69
PUM1-222	ENST00000531867	GPIHBP1	Q8IV16	184 aa		10.73	□□□□□ -0.69
PUM1-222	ENST00000531867	SNAPC4	Q5SXM2	1469 aa		10.72	□□□□□ -0.69
PUM1-222	ENST00000531867	GAPVD1	Q14C86	1478 aa		10.71	□□□□□ -0.69
PUM1-222	ENST00000531867	NUDT18	Q6ZVK8	323 aa		10.71	□□□□□ -0.69
PUM1-222	ENST00000531867	MAGI1	Q96QZ7	1491 aa	Predicted RBP	10.71	□□□□□ -0.69
PUM1-222	ENST00000531867	RAD54L2	Q9Y4B4	1467 aa		10.7	□□□□□ -0.7
PUM1-222	ENST00000531867	TDRD9	Q8NDG6	1382 aa	Known RBP	10.7	□□□□□ -0.7
PUM1-222	ENST00000531867	SOWAHB	A6NEL2	793 aa		10.69	□□□□□ -0.7
PUM1-222	ENST00000531867	SMAP	O00193	183 aa		10.69	□□□□□ -0.7
PUM1-222	ENST00000531867	GNPAT	O15228	680 aa		10.69	□□□□□ -0.7
PUM1-222	ENST00000531867	LRCH3	Q96II8	777 aa		10.69	□□□□□ -0.7
PUM1-222	ENST00000531867	SOGA1	O94964	1423 aa		10.68	□□□□□ -0.7
PUM1-222	ENST00000531867	GPR37	O15354	613 aa		10.68	□□□□□ -0.7
PUM1-222	ENST00000531867	RBM46	Q8TBY0	533 aa	Known RBP	10.68	□□□□□ -0.7
PUM1-222	ENST00000531867	CHMP7	Q8WUX9	453 aa	Predicted RBP	10.68	□□□□□ -0.7
PUM1-222	ENST00000531867	CDKN2AIP	Q9NXV6	580 aa	Predicted RBP	10.68	□□□□□ -0.7
PUM1-222	ENST00000531867	SYNJ2	O15056	1496 aa		10.68	□□□□□ -0.7
PUM1-222	ENST00000531867	HDGF	P51858	240 aa	Known RBP	10.67	□□□□□ -0.7
PUM1-222	ENST00000531867	PTPN5	P54829	565 aa		10.67	□□□□□ -0.7
PUM1-222	ENST00000531867	C3orf80	F5H4A9	247 aa		10.66	□□□□□ -0.7
PUM1-222	ENST00000531867	ADGRG1	Q9Y653	693 aa		10.66	□□□□□ -0.7
PUM1-222	ENST00000531867	BCAM	P50895	628 aa		10.65	□□□□□ -0.7
PUM1-222	ENST00000531867	NYAP1	Q6ZVC0	841 aa		10.65	□□□□□ -0.7
PUM1-222	ENST00000531867	EYA1	Q99502	592 aa		10.65	□□□□□ -0.7
PUM1-222	ENST00000531867	GRIN2B	Q13224	1484 aa		10.65	□□□□□ -0.7
PUM1-222	ENST00000531867	SLC4A3	P48751	1232 aa		10.64	□□□□□ -0.71
PUM1-222	ENST00000531867	OAT	P04181	439 aa		10.63	□□□□□ -0.71
PUM1-222	ENST00000531867	DHX30	Q7L2E3	1194 aa	Known RBP eCLIP	10.63	□□□□□ -0.71
PUM1-222	ENST00000531867	SAMD7	Q7Z3H4	446 aa		10.63	□□□□□ -0.71
PUM1-222	ENST00000531867	NECTIN2	Q92692	538 aa		10.63	□□□□□ -0.71
PUM1-222	ENST00000531867	TSR3	Q9UJK0	312 aa	Known RBP	10.63	□□□□□ -0.71
PUM1-222	ENST00000531867	KIF13A	Q9H1H9	1805 aa		10.63	□□□□□ -0.71
PUM1-222	ENST00000531867	DNAJB2	P25686	324 aa		10.62	□□□□□ -0.71
PUM1-222	ENST00000531867	LMOD2	Q6P5Q4	547 aa		10.62	□□□□□ -0.71
PUM1-222	ENST00000531867	HPS5	Q9UPZ3	1129 aa		10.62	□□□□□ -0.71
PUM1-222	ENST00000531867	FGD5	Q6ZNL6	1462 aa		10.61	□□□□□ -0.71
PUM1-222	ENST00000531867	ERCC6L2	Q5T890	1561 aa		10.6	□□□□□ -0.71
PUM1-222	ENST00000531867	RPL17-C18orf32	A0A0A6YYL6	228 aa	Known RBP	10.59	□□□□□ -0.71
PUM1-222	ENST00000531867	SLF2	Q8IX21	1173 aa		10.59	□□□□□ -0.71
PUM1-222	ENST00000531867	FECH	P22830	423 aa		10.58	□□□□□ -0.72
PUM1-222	ENST00000531867	PPP4C	P60510	307 aa		10.58	□□□□□ -0.72
PUM1-222	ENST00000531867	SWT1	Q5T5J6	900 aa	Known RBP	10.58	□□□□□ -0.72
PUM1-222	ENST00000531867	PXYLP1	Q8TE99	480 aa		10.58	□□□□□ -0.72
PUM1-222	ENST00000531867	PBRM1	Q86U86	1689 aa		10.57	□□□□□ -0.72
PUM1-222	ENST00000531867	RNF40	O75150	1001 aa		10.57	□□□□□ -0.72
PUM1-222	ENST00000531867	METTL3	Q86U44	580 aa	Known RBP	10.57	□□□□□ -0.72
PUM1-222	ENST00000531867	TMEM134	Q9H6X4	195 aa		10.57	□□□□□ -0.72
PUM1-222	ENST00000531867	WBP1L	Q9NX94	342 aa		10.57	□□□□□ -0.72
PUM1-222	ENST00000531867	RCCD1	A6NED2	376 aa		10.56	□□□□□ -0.72
PUM1-222	ENST00000531867	MAP2K5	Q13163	448 aa		10.56	□□□□□ -0.72
PUM1-222	ENST00000531867	FAM161A	Q3B820	660 aa		10.56	□□□□□ -0.72
PUM1-222	ENST00000531867	CUX1	P39880	1505 aa		10.55	□□□□□ -0.72
PUM1-222	ENST00000531867	BCAN	Q96GW7	911 aa		10.55	□□□□□ -0.72
PUM1-222	ENST00000531867	CEP170	Q5SW79	1584 aa		10.55	□□□□□ -0.72
PUM1-222	ENST00000531867	SHROOM2	Q13796	1616 aa		10.55	□□□□□ -0.72
PUM1-222	ENST00000531867	PLA2G2E	Q9NZK7	142 aa		10.54	□□□□□ -0.72
PUM1-222	ENST00000531867	NUP160	Q12769	1436 aa		10.53	□□□□□ -0.72
PUM1-222	ENST00000531867	MINK1	Q8N4C8	1332 aa	Predicted RBP	10.53	□□□□□ -0.72
PUM1-222	ENST00000531867	ABCA5	Q8WWZ7	1642 aa		10.52	□□□□□ -0.73
PUM1-222	ENST00000531867	GRIN2A	Q12879	1464 aa		10.51	□□□□□ -0.73
PUM1-222	ENST00000531867	PRR14	Q9BWN1	585 aa		10.51	□□□□□ -0.73
PUM1-222	ENST00000531867	ABCC10	Q5T3U5	1492 aa		10.5	□□□□□ -0.73
PUM1-222	ENST00000531867	ABCA10	Q8WWZ4	1543 aa		10.5	□□□□□ -0.73
PUM1-222	ENST00000531867	IRF6	O14896	467 aa		10.49	□□□□□ -0.73
PUM1-222	ENST00000531867	RSPH4A	Q5TD94	716 aa		10.49	□□□□□ -0.73
PUM1-222	ENST00000531867	ITGBL1	O95965	494 aa	Predicted RBP	10.48	□□□□□ -0.73
PUM1-222	ENST00000531867	IFFO2	Q5TF58	517 aa		10.48	□□□□□ -0.73
PUM1-222	ENST00000531867	ZC3H15	Q8WU90	426 aa	Known RBP	10.48	□□□□□ -0.73
PUM1-222	ENST00000531867	MAPKBP1	O60336	1514 aa		10.47	□□□□□ -0.73
PUM1-222	ENST00000531867	ZMYND10	O75800	440 aa		10.46	□□□□□ -0.73
PUM1-222	ENST00000531867	FAM69C	Q0P6D2	419 aa		10.46	□□□□□ -0.73
PUM1-222	ENST00000531867	BARGIN	Q6ZT62	677 aa		10.46	□□□□□ -0.73
PUM1-222	ENST00000531867	CCDC102A	Q96A19	550 aa		10.46	□□□□□ -0.73
PUM1-222	ENST00000531867	DAXX	Q9UER7	740 aa	Predicted RBP	10.46	□□□□□ -0.73
PUM1-222	ENST00000531867	ADAMTS12	P58397	1594 aa		10.45	□□□□□ -0.74

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