RNA–Protein interactions for RNA: ENST00000531867.1

PUM1-222, Transcript of pumilio RNA binding family member 1, humanhuman

TSL 4

Gene PUM1, Length 549 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUM1-222ENST00000531867 AEBP2Q6ZN18 517 aaPredicted RBP25.61■■□□□ 1.69
PUM1-222ENST00000531867 CHIC1Q5VXU3 224 aa24.9■■□□□ 1.58
PUM1-222ENST00000531867 SENP3Q9H4L4 574 aaPredicted RBP21.91■■□□□ 1.1
PUM1-222ENST00000531867 PHF23Q9BUL5 403 aaPredicted RBP21.79■■□□□ 1.08
PUM1-222ENST00000531867 FOXD1Q16676 465 aa20.25■□□□□ 0.83
PUM1-222ENST00000531867 PLPPR3Q6T4P5 718 aa20.18■□□□□ 0.82
PUM1-222ENST00000531867 ADRA2BP18089 450 aa19.27■□□□□ 0.68
PUM1-222ENST00000531867 PPP6R1Q9UPN7 881 aa19.27■□□□□ 0.68
PUM1-222ENST00000531867 PIAS4Q8N2W9 510 aaPredicted RBP19.11■□□□□ 0.65
PUM1-222ENST00000531867 MSH5O43196 834 aa18.88■□□□□ 0.61
PUM1-222ENST00000531867 SCAF1Q9H7N4 1312 aaKnown RBP17.78■□□□□ 0.44
PUM1-222ENST00000531867 PPP4R3CPQ6ZMV5 832 aa17.7■□□□□ 0.42
PUM1-222ENST00000531867 MAPK8IP2Q13387 824 aaPredicted RBP17.5■□□□□ 0.39
PUM1-222ENST00000531867 POTEDQ86YR6 584 aa17.45■□□□□ 0.38
PUM1-222ENST00000531867 DMRT2Q9Y5R5 561 aa17.42■□□□□ 0.38
PUM1-222ENST00000531867 CNKSR2Q8WXI2 1034 aa17.3■□□□□ 0.36
PUM1-222ENST00000531867 NCBP3Q53F19 620 aaKnown RBP17.26■□□□□ 0.35
PUM1-222ENST00000531867 KCNA4P22459 653 aa17.02■□□□□ 0.32
PUM1-222ENST00000531867 RNF216Q9NWF9 866 aaPredicted RBP17■□□□□ 0.31
PUM1-222ENST00000531867 HOXD11P31277 338 aaPredicted RBP16.98■□□□□ 0.31
PUM1-222ENST00000531867 NPM3O75607 178 aaKnown RBP16.91■□□□□ 0.3
PUM1-222ENST00000531867 DCAF8L1A6NGE4 600 aa16.65■□□□□ 0.26
PUM1-222ENST00000531867 DNAJC5BQ9UF47 199 aa16.55■□□□□ 0.24
PUM1-222ENST00000531867 SLC4A1APQ9BWU0 796 aaKnown RBP16.23■□□□□ 0.19
PUM1-222ENST00000531867 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.18■□□□□ 0.182e-10■□□□□ 9.2
PUM1-222ENST00000531867 RNF39Q9H2S5 420 aa16.09■□□□□ 0.17
PUM1-222ENST00000531867 SLC4A2P04920 1241 aa15.99■□□□□ 0.15
PUM1-222ENST00000531867 C1QBPQ07021 282 aaKnown RBP15.94■□□□□ 0.14
PUM1-222ENST00000531867 U3KPZ7 1027 aaPredicted RBP15.87■□□□□ 0.13
PUM1-222ENST00000531867 CACNB1Q02641 598 aaPredicted RBP15.83■□□□□ 0.12
PUM1-222ENST00000531867 FOXD4L1Q9NU39 408 aa15.8■□□□□ 0.12
PUM1-222ENST00000531867 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.72■□□□□ 0.11
PUM1-222ENST00000531867 HNRNPUL2Q1KMD3 747 aaKnown RBP15.72■□□□□ 0.11
PUM1-222ENST00000531867 MYCNP04198 464 aaPredicted RBP15.7■□□□□ 0.1
PUM1-222ENST00000531867 APLP2Q06481 763 aa15.65■□□□□ 0.1
PUM1-222ENST00000531867 SAMD1Q6SPF0 538 aaPredicted RBP15.62■□□□□ 0.09
PUM1-222ENST00000531867 ZBTB22O15209 634 aa15.61■□□□□ 0.09
PUM1-222ENST00000531867 EHMT2Q96KQ7 1210 aa15.47■□□□□ 0.07
PUM1-222ENST00000531867 CAPN15O75808 1086 aa15.46■□□□□ 0.07
PUM1-222ENST00000531867 SPINK5Q9NQ38 1064 aaPredicted RBP15.44■□□□□ 0.06
PUM1-222ENST00000531867 ZNF219Q9P2Y4 722 aaPredicted RBP15.39■□□□□ 0.05
PUM1-222ENST00000531867 CSRNP3Q8WYN3 585 aa15.38■□□□□ 0.05
PUM1-222ENST00000531867 ATXN8OSP0DMR3 200 aa15.31■□□□□ 0.04
PUM1-222ENST00000531867 TRHP20396 242 aaPredicted RBP15.31■□□□□ 0.04
PUM1-222ENST00000531867 DSG3P32926 999 aa15.23■□□□□ 0.03
PUM1-222ENST00000531867 ATF5Q9Y2D1 282 aaPredicted RBP15.16■□□□□ 0.02
PUM1-222ENST00000531867 ABCB7O75027 752 aa15.09■□□□□ 0.01
PUM1-222ENST00000531867 POLA2Q14181 598 aa15.01□□□□□ -0.01
PUM1-222ENST00000531867 ZBTB12Q9Y330 459 aaPredicted RBP14.88□□□□□ -0.03
PUM1-222ENST00000531867 FBLN2P98095 1184 aa14.7□□□□□ -0.06
PUM1-222ENST00000531867 RBM42Q9BTD8 480 aaKnown RBP14.63□□□□□ -0.07
PUM1-222ENST00000531867 NISCHQ9Y2I1 1504 aa14.57□□□□□ -0.08
PUM1-222ENST00000531867 OSCARQ8IYS5 282 aa14.53□□□□□ -0.08
PUM1-222ENST00000531867 MKRN4PQ13434 485 aaPredicted RBP14.52□□□□□ -0.09
PUM1-222ENST00000531867 SPDYE2BA6NHP3 402 aa14.41□□□□□ -0.1
PUM1-222ENST00000531867 SPDYE6P0CI01 402 aa14.41□□□□□ -0.1
PUM1-222ENST00000531867 SPDYE2Q495Y8 402 aa14.41□□□□□ -0.1
PUM1-222ENST00000531867 AKT1S1Q96B36 256 aa14.35□□□□□ -0.11
PUM1-222ENST00000531867 ZNF692Q9BU19 519 aaPredicted RBP14.28□□□□□ -0.12
PUM1-222ENST00000531867 SSUH2Q9Y2M2 353 aa14.24□□□□□ -0.13
PUM1-222ENST00000531867 SPDYE4A6NLX3 237 aa14.16□□□□□ -0.14
PUM1-222ENST00000531867 REM2Q8IYK8 340 aaPredicted RBP14.16□□□□□ -0.14
PUM1-222ENST00000531867 PABPN1Q86U42 306 aaKnown RBP eCLIP14.07□□□□□ -0.16
PUM1-222ENST00000531867 SPDYE1Q8NFV5 336 aaPredicted RBP14.04□□□□□ -0.16
PUM1-222ENST00000531867 CHRDL2Q6WN34 429 aa14.02□□□□□ -0.17
PUM1-222ENST00000531867 PITPNM1O00562 1244 aa14□□□□□ -0.17
PUM1-222ENST00000531867 FKBP8Q14318 412 aa13.96□□□□□ -0.17
PUM1-222ENST00000531867 CLEC11AQ9Y240 323 aa13.92□□□□□ -0.18
PUM1-222ENST00000531867 PROM2Q8N271 834 aa13.9□□□□□ -0.18
PUM1-222ENST00000531867 STAG3Q9UJ98 1225 aa13.88□□□□□ -0.19
PUM1-222ENST00000531867 POTEHQ6S545 545 aa13.81□□□□□ -0.2
PUM1-222ENST00000531867 PRR29P0C7W0 189 aa13.8□□□□□ -0.2
PUM1-222ENST00000531867 FXR2P51116 673 aaKnown RBP eCLIP13.79□□□□□ -0.2
PUM1-222ENST00000531867 PIP4P2Q8N4L2 257 aa13.77□□□□□ -0.21
PUM1-222ENST00000531867 PRKAR2AP13861 404 aaKnown RBP13.66□□□□□ -0.22
PUM1-222ENST00000531867 FBXO3Q9UK99 471 aa13.62□□□□□ -0.23
PUM1-222ENST00000531867 ABCC9O60706 1549 aa13.61□□□□□ -0.23
PUM1-222ENST00000531867 CHADLQ6NUI6 762 aa13.56□□□□□ -0.24
PUM1-222ENST00000531867 CREBZFQ9NS37 354 aa13.53□□□□□ -0.24
PUM1-222ENST00000531867 PLEKHG5O94827 1062 aa13.51□□□□□ -0.25
PUM1-222ENST00000531867 FARP1Q9Y4F1 1045 aaPredicted RBP13.47□□□□□ -0.25
PUM1-222ENST00000531867 MIER1Q8N108 512 aa13.45□□□□□ -0.26
PUM1-222ENST00000531867 PLCD3Q8N3E9 789 aa13.43□□□□□ -0.26
PUM1-222ENST00000531867 HAX1O00165 279 aa13.4□□□□□ -0.26
PUM1-222ENST00000531867 NPM1P06748 294 aaKnown RBP eCLIP13.4□□□□□ -0.26
PUM1-222ENST00000531867 ZBTB47Q9UFB7 747 aaPredicted RBP13.38□□□□□ -0.27
PUM1-222ENST00000531867 VASPP50552 380 aaPredicted RBP13.37□□□□□ -0.27
PUM1-222ENST00000531867 MNX1P50219 401 aaPredicted RBP13.35□□□□□ -0.27
PUM1-222ENST00000531867 C19orf67A6NJJ6 358 aa13.33□□□□□ -0.28
PUM1-222ENST00000531867 CCDC180Q9P1Z9 1646 aa13.28□□□□□ -0.28
PUM1-222ENST00000531867 CD44P16070 742 aaKnown RBP13.27□□□□□ -0.29
PUM1-222ENST00000531867 PAK3O75914 559 aaPredicted RBP13.24□□□□□ -0.29
PUM1-222ENST00000531867 SP7Q8TDD2 431 aaPredicted RBP13.2□□□□□ -0.3
PUM1-222ENST00000531867 KLHL34Q8N239 644 aa13.19□□□□□ -0.3
PUM1-222ENST00000531867 EVX2Q03828 476 aa13.17□□□□□ -0.3
PUM1-222ENST00000531867 ZRANB1Q9UGI0 708 aa13.15□□□□□ -0.3
PUM1-222ENST00000531867 CLCN6P51797 869 aa13.11□□□□□ -0.31
PUM1-222ENST00000531867 IFNLR1Q8IU57 520 aaPredicted RBP13.11□□□□□ -0.31
PUM1-222ENST00000531867 ZNF579Q8NAF0 562 aaKnown RBP13.11□□□□□ -0.31
PUM1-222ENST00000531867 NUBP1P53384 320 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms