RNA–Protein interactions for RNA: ENST00000530335.1

ME3-208, Transcript of malic enzyme 3, humanhuman

TSL 4

Gene ME3, Length 814 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ME3-208ENST00000530335 XIRP1Q702N8 1843 aaKnown RBP31.43■■■□□ 2.62
ME3-208ENST00000530335 TRPM2O94759 1503 aa31.41■■■□□ 2.62
ME3-208ENST00000530335 TOM1O60784 492 aa31.4■■■□□ 2.62
ME3-208ENST00000530335 SLC26A8Q96RN1 970 aa31.4■■■□□ 2.62
ME3-208ENST00000530335 NWD1Q149M9 1564 aa31.39■■■□□ 2.62
ME3-208ENST00000530335 ALKQ9UM73 1620 aa31.39■■■□□ 2.62
ME3-208ENST00000530335 ABCF1Q8NE71 845 aaKnown RBP eCLIP31.39■■■□□ 2.62
ME3-208ENST00000530335 CLTCL1P53675 1640 aa31.38■■■□□ 2.61
ME3-208ENST00000530335 PPP1R15AO75807 674 aaPredicted RBP31.38■■■□□ 2.61
ME3-208ENST00000530335 TRIM52Q96A61 297 aa31.37■■■□□ 2.61
ME3-208ENST00000530335 KCNA6P17658 529 aa31.35■■■□□ 2.61
ME3-208ENST00000530335 BCANQ96GW7 911 aa31.35■■■□□ 2.61
ME3-208ENST00000530335 CHD2O14647 1828 aaKnown RBP31.35■■■□□ 2.61
ME3-208ENST00000530335 KIF1BO60333 1816 aa31.35■■■□□ 2.61
ME3-208ENST00000530335 NKTRP30414 1462 aaKnown RBP31.33■■■□□ 2.61
ME3-208ENST00000530335 DIP2AQ14689 1571 aa31.32■■■□□ 2.6
ME3-208ENST00000530335 PIP4K2BP78356 416 aa31.29■■■□□ 2.6
ME3-208ENST00000530335 SLC4A1APQ9BWU0 796 aaKnown RBP31.29■■■□□ 2.6
ME3-208ENST00000530335 SCAF1Q9H7N4 1312 aaKnown RBP31.28■■■□□ 2.6
ME3-208ENST00000530335 NUTM2DQ5VT03 806 aaPredicted RBP31.28■■■□□ 2.6
ME3-208ENST00000530335 ADAMTS13Q76LX8 1427 aa31.28■■■□□ 2.6
ME3-208ENST00000530335 SENP3Q9H4L4 574 aaPredicted RBP31.28■■■□□ 2.6
ME3-208ENST00000530335 TBX22Q9Y458 520 aa31.27■■■□□ 2.6
ME3-208ENST00000530335 TMEM94Q12767 1356 aa31.25■■■□□ 2.59
ME3-208ENST00000530335 NRXN3Q9Y4C0 1643 aa31.24■■■□□ 2.59
ME3-208ENST00000530335 NEXMIFQ5QGS0 1516 aa31.24■■■□□ 2.59
ME3-208ENST00000530335 SETBP1Q9Y6X0 1596 aa31.22■■■□□ 2.59
ME3-208ENST00000530335 ZNF326Q5BKZ1 582 aaKnown RBP31.22■■■□□ 2.59
ME3-208ENST00000530335 PROSER2Q86WR7 435 aaPredicted RBP31.21■■■□□ 2.59
ME3-208ENST00000530335 PIK3R4Q99570 1358 aa31.2■■■□□ 2.59
ME3-208ENST00000530335 HSPA1LP34931 641 aa31.18■■■□□ 2.58
ME3-208ENST00000530335 SETD5Q9C0A6 1442 aa31.17■■■□□ 2.58
ME3-208ENST00000530335 ACIN1Q9UKV3 1341 aaKnown RBP31.16■■■□□ 2.58
ME3-208ENST00000530335 MPHOSPH9Q99550 1183 aa31.13■■■□□ 2.57
ME3-208ENST00000530335 RBM33Q96EV2 1170 aaKnown RBP31.12■■■□□ 2.57
ME3-208ENST00000530335 PPLO60437 1756 aa31.11■■■□□ 2.57
ME3-208ENST00000530335 FOXD1Q16676 465 aa31.11■■■□□ 2.57
ME3-208ENST00000530335 XRN1Q8IZH2 1706 aaKnown RBP31.1■■■□□ 2.57
ME3-208ENST00000530335 NCOA3Q9Y6Q9 1424 aa31.09■■■□□ 2.57
ME3-208ENST00000530335 PTPRUQ92729 1446 aa31.08■■■□□ 2.57
ME3-208ENST00000530335 MSH6P52701 1360 aa31.08■■■□□ 2.57
ME3-208ENST00000530335 DISP3Q9P2K9 1392 aa31.07■■■□□ 2.56
ME3-208ENST00000530335 CCDC144AA2RUR9 1427 aa31.06■■■□□ 2.56
ME3-208ENST00000530335 RAB3GAP2Q9H2M9 1393 aa31.05■■■□□ 2.56
ME3-208ENST00000530335 RPGRIP1LQ68CZ1 1315 aa31.05■■■□□ 2.56
ME3-208ENST00000530335 FAM135BQ49AJ0 1406 aa31.05■■■□□ 2.56
ME3-208ENST00000530335 SETD1AO15047 1707 aaKnown RBP31.04■■■□□ 2.56
ME3-208ENST00000530335 ROBO1Q9Y6N7 1651 aa31.03■■■□□ 2.56
ME3-208ENST00000530335 AMOTL2Q9Y2J4 779 aa31.03■■■□□ 2.56
ME3-208ENST00000530335 VGFO15240 615 aaPredicted RBP31.01■■■□□ 2.55
ME3-208ENST00000530335 METP08581 1390 aa31.01■■■□□ 2.55
ME3-208ENST00000530335 SIPA1L2Q9P2F8 1722 aaPredicted RBP31.01■■■□□ 2.55
ME3-208ENST00000530335 IFT172Q9UG01 1749 aa31■■■□□ 2.55
ME3-208ENST00000530335 SPATA31E1Q6ZUB1 1445 aa30.98■■■□□ 2.55
ME3-208ENST00000530335 MED1Q15648 1581 aaPredicted RBP30.96■■■□□ 2.55
ME3-208ENST00000530335 C14orf37Q86TY3 774 aa30.94■■■□□ 2.54
ME3-208ENST00000530335 SLAIN2Q9P270 581 aa30.92■■■□□ 2.54
ME3-208ENST00000530335 C19orf44Q9H6X5 657 aa30.91■■■□□ 2.54
ME3-208ENST00000530335 CADPS2Q86UW7 1296 aa30.88■■■□□ 2.53
ME3-208ENST00000530335 DCCP43146 1447 aa30.88■■■□□ 2.53
ME3-208ENST00000530335 RGL3Q3MIN7 710 aa30.87■■■□□ 2.53
ME3-208ENST00000530335 ANKRD30BQ9BXX2 1392 aa30.87■■■□□ 2.53
ME3-208ENST00000530335 HRCP23327 699 aa30.86■■■□□ 2.53
ME3-208ENST00000530335 PRAG1Q86YV5 1406 aa30.86■■■□□ 2.53
ME3-208ENST00000530335 NALCNQ8IZF0 1738 aa30.86■■■□□ 2.53
ME3-208ENST00000530335 PHLPP1O60346 1717 aa30.85■■■□□ 2.53
ME3-208ENST00000530335 PTCH1Q13635 1447 aa30.85■■■□□ 2.53
ME3-208ENST00000530335 ATF3P18847 181 aa30.85■■■□□ 2.53
ME3-208ENST00000530335 ADGRF5Q8IZF2 1346 aa30.83■■■□□ 2.53
ME3-208ENST00000530335 ADGRL3Q9HAR2 1447 aa30.82■■■□□ 2.52
ME3-208ENST00000530335 ILDR2Q71H61 639 aa30.8■■■□□ 2.52
ME3-208ENST00000530335 PIK3C2GO75747 1445 aa30.78■■■□□ 2.52
ME3-208ENST00000530335 ROBO2Q9HCK4 1378 aa30.77■■■□□ 2.52
ME3-208ENST00000530335 COL16A1Q07092 1604 aaPredicted RBP30.76■■■□□ 2.52
ME3-208ENST00000530335 AHDC1Q5TGY3 1603 aaPredicted RBP30.76■■■□□ 2.51
ME3-208ENST00000530335 MYOM2P54296 1465 aa30.75■■■□□ 2.51
ME3-208ENST00000530335 MST1RQ04912 1400 aa30.74■■■□□ 2.51
ME3-208ENST00000530335 NRXN1Q9ULB1 1477 aa30.73■■■□□ 2.51
ME3-208ENST00000530335 KNDC1Q76NI1 1749 aa30.73■■■□□ 2.51
ME3-208ENST00000530335 ASXL1Q8IXJ9 1541 aa30.73■■■□□ 2.51
ME3-208ENST00000530335 LAMC1P11047 1609 aa30.71■■■□□ 2.51
ME3-208ENST00000530335 TECPR2O15040 1411 aa30.69■■■□□ 2.5
ME3-208ENST00000530335 BRINP3Q76B58 766 aa30.68■■■□□ 2.5
ME3-208ENST00000530335 NHSL1Q5SYE7 1610 aa30.67■■■□□ 2.5
ME3-208ENST00000530335 LRPPRCP42704 1394 aaKnown RBP30.66■■■□□ 2.5
ME3-208ENST00000530335 JCADQ9P266 1359 aa30.66■■■□□ 2.5
ME3-208ENST00000530335 PHF23Q9BUL5 403 aaPredicted RBP30.65■■■□□ 2.5
ME3-208ENST00000530335 SHPRHQ149N8 1683 aa30.62■■■□□ 2.49
ME3-208ENST00000530335 ABCC11Q96J66 1382 aa30.62■■■□□ 2.49
ME3-208ENST00000530335 CDC42BPGQ6DT37 1551 aa30.62■■■□□ 2.49
ME3-208ENST00000530335 TMEM132EQ6IEE7 984 aa30.61■■■□□ 2.49
ME3-208ENST00000530335 C14orf93Q9H972 538 aaKnown RBP30.61■■■□□ 2.49
ME3-208ENST00000530335 YTHDC2Q9H6S0 1430 aaKnown RBP30.61■■■□□ 2.49
ME3-208ENST00000530335 C1orf167Q5SNV9 1468 aa30.61■■■□□ 2.49
ME3-208ENST00000530335 STK26Q9P289 416 aa30.59■■■□□ 2.49
ME3-208ENST00000530335 CFAP70Q5T0N1 1121 aa30.55■■■□□ 2.48
ME3-208ENST00000530335 SOCS7O14512 581 aa30.54■■■□□ 2.48
ME3-208ENST00000530335 DHX57Q6P158 1386 aaKnown RBP30.53■■■□□ 2.48
ME3-208ENST00000530335 WAPLQ7Z5K2 1190 aa30.52■■■□□ 2.48
ME3-208ENST00000530335 PLEKHH1Q9ULM0 1364 aa30.52■■■□□ 2.48
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms