RNA–Protein interactions for RNA: ENST00000526450.1

PITPNM1-206, Transcript of phosphatidylinositol transfer protein membrane associated 1, humanhuman

TSL 3

Gene PITPNM1, Length 750 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PITPNM1-206ENST00000526450 KIF1BO60333 1816 aa28.22■■■□□ 2.11
PITPNM1-206ENST00000526450 TRIM52Q96A61 297 aa28.21■■■□□ 2.11
PITPNM1-206ENST00000526450 SENP3Q9H4L4 574 aaPredicted RBP28.2■■■□□ 2.1
PITPNM1-206ENST00000526450 ALKQ9UM73 1620 aa28.19■■■□□ 2.1
PITPNM1-206ENST00000526450 UBAP1LF5GYI3 381 aa28.19■■■□□ 2.1
PITPNM1-206ENST00000526450 SLC26A8Q96RN1 970 aa28.18■■■□□ 2.1
PITPNM1-206ENST00000526450 CHD2O14647 1828 aaKnown RBP28.18■■■□□ 2.1
PITPNM1-206ENST00000526450 PLEKHG1Q9ULL1 1385 aa28.17■■■□□ 2.1
PITPNM1-206ENST00000526450 NWD1Q149M9 1564 aa28.16■■■□□ 2.1
PITPNM1-206ENST00000526450 NUTM2DQ5VT03 806 aaPredicted RBP28.15■■■□□ 2.1
PITPNM1-206ENST00000526450 PPP1R15AO75807 674 aaPredicted RBP28.13■■■□□ 2.09
PITPNM1-206ENST00000526450 SLC4A1APQ9BWU0 796 aaKnown RBP28.12■■■□□ 2.09
PITPNM1-206ENST00000526450 NRXN3Q9Y4C0 1643 aa28.11■■■□□ 2.09
PITPNM1-206ENST00000526450 BCANQ96GW7 911 aa28.1■■■□□ 2.09
PITPNM1-206ENST00000526450 NEXMIFQ5QGS0 1516 aa28.09■■■□□ 2.09
PITPNM1-206ENST00000526450 ADAMTS13Q76LX8 1427 aa28.09■■■□□ 2.09
PITPNM1-206ENST00000526450 ABCF1Q8NE71 845 aaKnown RBP eCLIP28.08■■■□□ 2.09
PITPNM1-206ENST00000526450 DIP2AQ14689 1571 aa28.07■■■□□ 2.08
PITPNM1-206ENST00000526450 HDGFP51858 240 aaKnown RBP28.07■■■□□ 2.08
PITPNM1-206ENST00000526450 FOXD1Q16676 465 aa28.06■■■□□ 2.08
PITPNM1-206ENST00000526450 SETD5Q9C0A6 1442 aa28.06■■■□□ 2.08
PITPNM1-206ENST00000526450 KCNA6P17658 529 aa28.05■■■□□ 2.08
PITPNM1-206ENST00000526450 NKTRP30414 1462 aaKnown RBP28.05■■■□□ 2.08
PITPNM1-206ENST00000526450 SETBP1Q9Y6X0 1596 aa28.03■■■□□ 2.08
PITPNM1-206ENST00000526450 PIP4K2BP78356 416 aa28.03■■■□□ 2.08
PITPNM1-206ENST00000526450 PPLO60437 1756 aa28.02■■■□□ 2.08
PITPNM1-206ENST00000526450 TOM1O60784 492 aa28.02■■■□□ 2.08
PITPNM1-206ENST00000526450 ZNF326Q5BKZ1 582 aaKnown RBP28.01■■■□□ 2.07
PITPNM1-206ENST00000526450 TMEM94Q12767 1356 aa28■■■□□ 2.07
PITPNM1-206ENST00000526450 SCAF1Q9H7N4 1312 aaKnown RBP28■■■□□ 2.07
PITPNM1-206ENST00000526450 RAB3GAP2Q9H2M9 1393 aa27.99■■■□□ 2.07
PITPNM1-206ENST00000526450 RBM33Q96EV2 1170 aaKnown RBP27.99■■■□□ 2.07
PITPNM1-206ENST00000526450 MPHOSPH9Q99550 1183 aa27.99■■■□□ 2.07
PITPNM1-206ENST00000526450 TBX22Q9Y458 520 aa27.99■■■□□ 2.07
PITPNM1-206ENST00000526450 SETD1AO15047 1707 aaKnown RBP27.95■■■□□ 2.07
PITPNM1-206ENST00000526450 XRN1Q8IZH2 1706 aaKnown RBP27.95■■■□□ 2.07
PITPNM1-206ENST00000526450 PROSER2Q86WR7 435 aaPredicted RBP27.95■■■□□ 2.06
PITPNM1-206ENST00000526450 IFT172Q9UG01 1749 aa27.94■■■□□ 2.06
PITPNM1-206ENST00000526450 PTPRUQ92729 1446 aa27.93■■■□□ 2.06
PITPNM1-206ENST00000526450 PIK3R4Q99570 1358 aa27.91■■■□□ 2.06
PITPNM1-206ENST00000526450 HSPA1LP34931 641 aa27.9■■■□□ 2.06
PITPNM1-206ENST00000526450 CCDC144AA2RUR9 1427 aa27.9■■■□□ 2.06
PITPNM1-206ENST00000526450 SPATA31E1Q6ZUB1 1445 aa27.87■■■□□ 2.05
PITPNM1-206ENST00000526450 METP08581 1390 aa27.86■■■□□ 2.05
PITPNM1-206ENST00000526450 SIPA1L2Q9P2F8 1722 aaPredicted RBP27.86■■■□□ 2.05
PITPNM1-206ENST00000526450 ROBO1Q9Y6N7 1651 aa27.84■■■□□ 2.05
PITPNM1-206ENST00000526450 ACIN1Q9UKV3 1341 aaKnown RBP27.84■■■□□ 2.05
PITPNM1-206ENST00000526450 AMOTL2Q9Y2J4 779 aa27.82■■■□□ 2.04
PITPNM1-206ENST00000526450 MSH6P52701 1360 aa27.82■■■□□ 2.04
PITPNM1-206ENST00000526450 RPGRIP1LQ68CZ1 1315 aa27.81■■■□□ 2.04
PITPNM1-206ENST00000526450 VGFO15240 615 aaPredicted RBP27.78■■■□□ 2.04
PITPNM1-206ENST00000526450 NCOA3Q9Y6Q9 1424 aa27.77■■■□□ 2.04
PITPNM1-206ENST00000526450 RGL3Q3MIN7 710 aa27.77■■■□□ 2.04
PITPNM1-206ENST00000526450 NALCNQ8IZF0 1738 aa27.76■■■□□ 2.03
PITPNM1-206ENST00000526450 FAM135BQ49AJ0 1406 aa27.75■■■□□ 2.03
PITPNM1-206ENST00000526450 DISP3Q9P2K9 1392 aa27.73■■■□□ 2.03
PITPNM1-206ENST00000526450 ADGRF5Q8IZF2 1346 aa27.72■■■□□ 2.03
PITPNM1-206ENST00000526450 C14orf37Q86TY3 774 aa27.72■■■□□ 2.03
PITPNM1-206ENST00000526450 MED1Q15648 1581 aaPredicted RBP27.71■■■□□ 2.03
PITPNM1-206ENST00000526450 HRCP23327 699 aa27.7■■■□□ 2.02
PITPNM1-206ENST00000526450 ANKRD30BQ9BXX2 1392 aa27.7■■■□□ 2.02
PITPNM1-206ENST00000526450 ASXL1Q8IXJ9 1541 aa27.68■■■□□ 2.02
PITPNM1-206ENST00000526450 PHLPP1O60346 1717 aa27.68■■■□□ 2.02
PITPNM1-206ENST00000526450 SLAIN2Q9P270 581 aa27.68■■■□□ 2.02
PITPNM1-206ENST00000526450 C19orf44Q9H6X5 657 aa27.67■■■□□ 2.02
PITPNM1-206ENST00000526450 PIK3C2GO75747 1445 aa27.66■■■□□ 2.02
PITPNM1-206ENST00000526450 PTCH1Q13635 1447 aa27.66■■■□□ 2.02
PITPNM1-206ENST00000526450 PRAG1Q86YV5 1406 aa27.66■■■□□ 2.02
PITPNM1-206ENST00000526450 ROBO2Q9HCK4 1378 aa27.64■■■□□ 2.02
PITPNM1-206ENST00000526450 DCCP43146 1447 aa27.64■■■□□ 2.02
PITPNM1-206ENST00000526450 ADGRL3Q9HAR2 1447 aa27.64■■■□□ 2.02
PITPNM1-206ENST00000526450 KNDC1Q76NI1 1749 aa27.63■■■□□ 2.01
PITPNM1-206ENST00000526450 MYOM2P54296 1465 aa27.62■■■□□ 2.01
PITPNM1-206ENST00000526450 NRXN1Q9ULB1 1477 aa27.62■■■□□ 2.01
PITPNM1-206ENST00000526450 ATF3P18847 181 aa27.61■■■□□ 2.01
PITPNM1-206ENST00000526450 CADPS2Q86UW7 1296 aa27.61■■■□□ 2.01
PITPNM1-206ENST00000526450 COL16A1Q07092 1604 aaPredicted RBP27.6■■■□□ 2.01
PITPNM1-206ENST00000526450 LAMC1P11047 1609 aa27.59■■■□□ 2.01
PITPNM1-206ENST00000526450 MST1RQ04912 1400 aa27.58■■■□□ 2
PITPNM1-206ENST00000526450 AHDC1Q5TGY3 1603 aaPredicted RBP27.56■■■□□ 2
PITPNM1-206ENST00000526450 NHSL1Q5SYE7 1610 aa27.54■■■□□ 2
PITPNM1-206ENST00000526450 ILDR2Q71H61 639 aa27.54■■■□□ 2
PITPNM1-206ENST00000526450 TECPR2O15040 1411 aa27.53■■■□□ 2
PITPNM1-206ENST00000526450 TMEM132EQ6IEE7 984 aa27.53■■■□□ 2
PITPNM1-206ENST00000526450 LRPPRCP42704 1394 aaKnown RBP27.51■■□□□ 1.99
PITPNM1-206ENST00000526450 BRINP3Q76B58 766 aa27.5■■□□□ 1.99
PITPNM1-206ENST00000526450 STK26Q9P289 416 aa27.49■■□□□ 1.99
PITPNM1-206ENST00000526450 YTHDC2Q9H6S0 1430 aaKnown RBP27.49■■□□□ 1.99
PITPNM1-206ENST00000526450 CFAP70Q5T0N1 1121 aa27.48■■□□□ 1.99
PITPNM1-206ENST00000526450 C14orf93Q9H972 538 aaKnown RBP27.48■■□□□ 1.99
PITPNM1-206ENST00000526450 CDC42BPGQ6DT37 1551 aa27.48■■□□□ 1.99
PITPNM1-206ENST00000526450 ABCC11Q96J66 1382 aa27.47■■□□□ 1.99
PITPNM1-206ENST00000526450 DHX57Q6P158 1386 aaKnown RBP27.46■■□□□ 1.99
PITPNM1-206ENST00000526450 PLEKHH1Q9ULM0 1364 aa27.46■■□□□ 1.99
PITPNM1-206ENST00000526450 SHPRHQ149N8 1683 aa27.45■■□□□ 1.98
PITPNM1-206ENST00000526450 ADGRB1O14514 1584 aa27.44■■□□□ 1.98
PITPNM1-206ENST00000526450 C1orf167Q5SNV9 1468 aa27.44■■□□□ 1.98
PITPNM1-206ENST00000526450 WAPLQ7Z5K2 1190 aa27.43■■□□□ 1.98
PITPNM1-206ENST00000526450 DCAF11Q8TEB1 546 aa27.42■■□□□ 1.98
PITPNM1-206ENST00000526450 KDM2AQ9Y2K7 1162 aa27.41■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms