RNA–Protein interactions for RNA: ENST00000523237.1

CLN8-206, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 3

Gene CLN8, Length 835 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-206ENST00000523237 PPP1R15AO75807 674 aaPredicted RBP24.49■■□□□ 1.51
CLN8-206ENST00000523237 BCANQ96GW7 911 aa24.49■■□□□ 1.51
CLN8-206ENST00000523237 SLC26A8Q96RN1 970 aa24.49■■□□□ 1.51
CLN8-206ENST00000523237 SCAF1Q9H7N4 1312 aaKnown RBP24.49■■□□□ 1.51
CLN8-206ENST00000523237 PIP4K2BP78356 416 aa24.48■■□□□ 1.51
CLN8-206ENST00000523237 XIRP1Q702N8 1843 aaKnown RBP24.47■■□□□ 1.51
CLN8-206ENST00000523237 PLEKHG1Q9ULL1 1385 aa24.47■■□□□ 1.51
CLN8-206ENST00000523237 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.47■■□□□ 1.51
CLN8-206ENST00000523237 ALKQ9UM73 1620 aa24.45■■□□□ 1.5
CLN8-206ENST00000523237 KCNA6P17658 529 aa24.44■■□□□ 1.5
CLN8-206ENST00000523237 NWD1Q149M9 1564 aa24.42■■□□□ 1.5
CLN8-206ENST00000523237 TRIM52Q96A61 297 aa24.42■■□□□ 1.5
CLN8-206ENST00000523237 SENP3Q9H4L4 574 aaPredicted RBP24.4■■□□□ 1.5
CLN8-206ENST00000523237 TRPM2O94759 1503 aa24.4■■□□□ 1.5
CLN8-206ENST00000523237 CHD2O14647 1828 aaKnown RBP24.4■■□□□ 1.5
CLN8-206ENST00000523237 NKTRP30414 1462 aaKnown RBP24.39■■□□□ 1.5
CLN8-206ENST00000523237 NUTM2DQ5VT03 806 aaPredicted RBP24.38■■□□□ 1.49
CLN8-206ENST00000523237 CLTCL1P53675 1640 aa24.38■■□□□ 1.49
CLN8-206ENST00000523237 KIF1BO60333 1816 aa24.37■■□□□ 1.49
CLN8-206ENST00000523237 DIP2AQ14689 1571 aa24.37■■□□□ 1.49
CLN8-206ENST00000523237 PROSER2Q86WR7 435 aaPredicted RBP24.36■■□□□ 1.49
CLN8-206ENST00000523237 TBX22Q9Y458 520 aa24.36■■□□□ 1.49
CLN8-206ENST00000523237 TMEM94Q12767 1356 aa24.36■■□□□ 1.49
CLN8-206ENST00000523237 DISP3Q9P2K9 1392 aa24.35■■□□□ 1.49
CLN8-206ENST00000523237 HSPA1LP34931 641 aa24.35■■□□□ 1.49
CLN8-206ENST00000523237 SLC4A1APQ9BWU0 796 aaKnown RBP24.34■■□□□ 1.49
CLN8-206ENST00000523237 ADAMTS13Q76LX8 1427 aa24.34■■□□□ 1.49
CLN8-206ENST00000523237 ZNF326Q5BKZ1 582 aaKnown RBP24.33■■□□□ 1.49
CLN8-206ENST00000523237 PIK3R4Q99570 1358 aa24.29■■□□□ 1.48
CLN8-206ENST00000523237 RBM33Q96EV2 1170 aaKnown RBP24.28■■□□□ 1.48
CLN8-206ENST00000523237 NEXMIFQ5QGS0 1516 aa24.27■■□□□ 1.48
CLN8-206ENST00000523237 SETBP1Q9Y6X0 1596 aa24.27■■□□□ 1.48
CLN8-206ENST00000523237 NRXN3Q9Y4C0 1643 aa24.27■■□□□ 1.48
CLN8-206ENST00000523237 MSH6P52701 1360 aa24.26■■□□□ 1.47
CLN8-206ENST00000523237 NCOA3Q9Y6Q9 1424 aa24.22■■□□□ 1.47
CLN8-206ENST00000523237 ACIN1Q9UKV3 1341 aaKnown RBP24.22■■□□□ 1.47
CLN8-206ENST00000523237 FAM135BQ49AJ0 1406 aa24.21■■□□□ 1.47
CLN8-206ENST00000523237 ROBO1Q9Y6N7 1651 aa24.19■■□□□ 1.46
CLN8-206ENST00000523237 AMOTL2Q9Y2J4 779 aa24.19■■□□□ 1.46
CLN8-206ENST00000523237 PTPRUQ92729 1446 aa24.18■■□□□ 1.46
CLN8-206ENST00000523237 SETD5Q9C0A6 1442 aa24.18■■□□□ 1.46
CLN8-206ENST00000523237 MED1Q15648 1581 aaPredicted RBP24.18■■□□□ 1.46
CLN8-206ENST00000523237 FOXD1Q16676 465 aa24.18■■□□□ 1.46
CLN8-206ENST00000523237 MPHOSPH9Q99550 1183 aa24.18■■□□□ 1.46
CLN8-206ENST00000523237 XRN1Q8IZH2 1706 aaKnown RBP24.18■■□□□ 1.46
CLN8-206ENST00000523237 C14orf37Q86TY3 774 aa24.17■■□□□ 1.46
CLN8-206ENST00000523237 PPLO60437 1756 aa24.16■■□□□ 1.46
CLN8-206ENST00000523237 RPGRIP1LQ68CZ1 1315 aa24.16■■□□□ 1.46
CLN8-206ENST00000523237 VGFO15240 615 aaPredicted RBP24.16■■□□□ 1.46
CLN8-206ENST00000523237 CCDC144AA2RUR9 1427 aa24.15■■□□□ 1.46
CLN8-206ENST00000523237 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.15■■□□□ 1.46
CLN8-206ENST00000523237 SLAIN2Q9P270 581 aa24.14■■□□□ 1.45
CLN8-206ENST00000523237 METP08581 1390 aa24.14■■□□□ 1.45
CLN8-206ENST00000523237 ILDR2Q71H61 639 aa24.12■■□□□ 1.45
CLN8-206ENST00000523237 C19orf44Q9H6X5 657 aa24.12■■□□□ 1.45
CLN8-206ENST00000523237 CADPS2Q86UW7 1296 aa24.1■■□□□ 1.45
CLN8-206ENST00000523237 SETD1AO15047 1707 aaKnown RBP24.1■■□□□ 1.45
CLN8-206ENST00000523237 RAB3GAP2Q9H2M9 1393 aa24.09■■□□□ 1.45
CLN8-206ENST00000523237 ATF3P18847 181 aa24.08■■□□□ 1.45
CLN8-206ENST00000523237 PHLPP1O60346 1717 aa24.07■■□□□ 1.44
CLN8-206ENST00000523237 IFT172Q9UG01 1749 aa24.05■■□□□ 1.44
CLN8-206ENST00000523237 DCCP43146 1447 aa24.05■■□□□ 1.44
CLN8-206ENST00000523237 SPATA31E1Q6ZUB1 1445 aa24.05■■□□□ 1.44
CLN8-206ENST00000523237 RGL3Q3MIN7 710 aa24.03■■□□□ 1.44
CLN8-206ENST00000523237 PHF23Q9BUL5 403 aaPredicted RBP24.01■■□□□ 1.43
CLN8-206ENST00000523237 ANKRD30BQ9BXX2 1392 aa24.01■■□□□ 1.43
CLN8-206ENST00000523237 NALCNQ8IZF0 1738 aa24■■□□□ 1.43
CLN8-206ENST00000523237 PTCH1Q13635 1447 aa24■■□□□ 1.43
CLN8-206ENST00000523237 ADGRL3Q9HAR2 1447 aa23.99■■□□□ 1.43
CLN8-206ENST00000523237 PRAG1Q86YV5 1406 aa23.97■■□□□ 1.43
CLN8-206ENST00000523237 ADGRF5Q8IZF2 1346 aa23.97■■□□□ 1.43
CLN8-206ENST00000523237 COL16A1Q07092 1604 aaPredicted RBP23.96■■□□□ 1.43
CLN8-206ENST00000523237 AHDC1Q5TGY3 1603 aaPredicted RBP23.96■■□□□ 1.43
CLN8-206ENST00000523237 MST1RQ04912 1400 aa23.94■■□□□ 1.42
CLN8-206ENST00000523237 ROBO2Q9HCK4 1378 aa23.94■■□□□ 1.42
CLN8-206ENST00000523237 SOCS7O14512 581 aa23.94■■□□□ 1.42
CLN8-206ENST00000523237 HRCP23327 699 aa23.94■■□□□ 1.42
CLN8-206ENST00000523237 BRINP3Q76B58 766 aa23.93■■□□□ 1.42
CLN8-206ENST00000523237 JCADQ9P266 1359 aa23.92■■□□□ 1.42
CLN8-206ENST00000523237 ASXL1Q8IXJ9 1541 aa23.91■■□□□ 1.42
CLN8-206ENST00000523237 PIK3C2GO75747 1445 aa23.91■■□□□ 1.42
CLN8-206ENST00000523237 NHSL1Q5SYE7 1610 aa23.88■■□□□ 1.41
CLN8-206ENST00000523237 MYOM2P54296 1465 aa23.87■■□□□ 1.41
CLN8-206ENST00000523237 KNDC1Q76NI1 1749 aa23.87■■□□□ 1.41
CLN8-206ENST00000523237 SHPRHQ149N8 1683 aa23.86■■□□□ 1.41
CLN8-206ENST00000523237 LAMC1P11047 1609 aa23.86■■□□□ 1.41
CLN8-206ENST00000523237 TECPR2O15040 1411 aa23.85■■□□□ 1.41
CLN8-206ENST00000523237 NRXN1Q9ULB1 1477 aa23.85■■□□□ 1.41
CLN8-206ENST00000523237 LRPPRCP42704 1394 aaKnown RBP23.84■■□□□ 1.41
CLN8-206ENST00000523237 C1orf167Q5SNV9 1468 aa23.83■■□□□ 1.41
CLN8-206ENST00000523237 STK26Q9P289 416 aa23.83■■□□□ 1.41
CLN8-206ENST00000523237 SPATA31A6Q5VVP1 1343 aa23.83■■□□□ 1.4
CLN8-206ENST00000523237 ABCC11Q96J66 1382 aa23.82■■□□□ 1.4
CLN8-206ENST00000523237 TMEM132EQ6IEE7 984 aa23.82■■□□□ 1.4
CLN8-206ENST00000523237 CDC42BPGQ6DT37 1551 aa23.82■■□□□ 1.4
CLN8-206ENST00000523237 RGS17Q9UGC6 210 aaPredicted RBP23.81■■□□□ 1.4
CLN8-206ENST00000523237 YTHDC2Q9H6S0 1430 aaKnown RBP23.8■■□□□ 1.4
CLN8-206ENST00000523237 C14orf93Q9H972 538 aaKnown RBP23.8■■□□□ 1.4
CLN8-206ENST00000523237 CFAP70Q5T0N1 1121 aa23.77■■□□□ 1.4
CLN8-206ENST00000523237 WAPLQ7Z5K2 1190 aa23.77■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 100.8 ms