RNA–Protein interactions for RNA: ENST00000517691.1

SKP1-204, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 1 (best)

Gene SKP1, Length 2,033 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-204ENST00000517691 AQRO60306 1485 aaKnown RBP eCLIP4.56□□□□□ -1.683e-6■■□□□ 13.8
SKP1-204ENST00000517691 ZNF608Q9ULD9 1512 aaPredicted RBP4.55□□□□□ -1.68
SKP1-204ENST00000517691 IGHA1P01876 353 aa4.55□□□□□ -1.68
SKP1-204ENST00000517691 PPP1R18Q6NYC8 613 aa4.55□□□□□ -1.68
SKP1-204ENST00000517691 TMEM151AQ8N4L1 468 aa4.55□□□□□ -1.68
SKP1-204ENST00000517691 ZBED2Q9BTP6 218 aa4.55□□□□□ -1.68
SKP1-204ENST00000517691 C11orf95C9JLR9 678 aaPredicted RBP4.55□□□□□ -1.68
SKP1-204ENST00000517691 LORP23490 312 aaPredicted RBP4.55□□□□□ -1.68
SKP1-204ENST00000517691 MFRPQ9BY79 579 aa4.54□□□□□ -1.68
SKP1-204ENST00000517691 BCL2L12Q9HB09 334 aa4.54□□□□□ -1.68
SKP1-204ENST00000517691 PPP1R37O75864 691 aa4.53□□□□□ -1.68
SKP1-204ENST00000517691 LCE2CQ5TA81 110 aa4.53□□□□□ -1.68
SKP1-204ENST00000517691 TRIM67Q6ZTA4 783 aa4.53□□□□□ -1.68
SKP1-204ENST00000517691 KRTAP4-12Q9BQ66 201 aa4.53□□□□□ -1.68
SKP1-204ENST00000517691 SYNJ1O43426 1573 aa4.53□□□□□ -1.68
SKP1-204ENST00000517691 LAPTM4BQ86VI4 370 aa4.53□□□□□ -1.68
SKP1-204ENST00000517691 CRIPAKQ8N1N5 446 aa4.53□□□□□ -1.68
SKP1-204ENST00000517691 FBXO22Q8NEZ5 403 aa4.53□□□□□ -1.68
SKP1-204ENST00000517691 KRTAP4-7Q9BYR0 210 aa4.53□□□□□ -1.68
SKP1-204ENST00000517691 TOP2BQ02880 1626 aa4.53□□□□□ -1.69
SKP1-204ENST00000517691 CHMP7Q8WUX9 453 aaPredicted RBP4.52□□□□□ -1.69
SKP1-204ENST00000517691 WBP1LQ9NX94 342 aa4.52□□□□□ -1.69
SKP1-204ENST00000517691 TARBP1Q13395 1621 aaKnown RBP4.52□□□□□ -1.69
SKP1-204ENST00000517691 FAM187AA6NFU0 413 aa4.51□□□□□ -1.69
SKP1-204ENST00000517691 BCAMP50895 628 aa4.51□□□□□ -1.69
SKP1-204ENST00000517691 KCNV2Q8TDN2 545 aa4.51□□□□□ -1.69
SKP1-204ENST00000517691 PTCD2Q8WV60 388 aaKnown RBP4.51□□□□□ -1.69
SKP1-204ENST00000517691 C2orf72A6NCS6 295 aa4.51□□□□□ -1.69
SKP1-204ENST00000517691 GGCXP38435 758 aa4.51□□□□□ -1.69
SKP1-204ENST00000517691 GAPVD1Q14C86 1478 aa4.51□□□□□ -1.69
SKP1-204ENST00000517691 ABCA10Q8WWZ4 1543 aa4.51□□□□□ -1.69
SKP1-204ENST00000517691 PTPREP23469 700 aa4.5□□□□□ -1.69
SKP1-204ENST00000517691 GRIN2BQ13224 1484 aa4.5□□□□□ -1.69
SKP1-204ENST00000517691 BIVM-ERCC5R4GMW8 1640 aa4.5□□□□□ -1.69
SKP1-204ENST00000517691 EIF4G3O43432 1585 aaKnown RBP4.5□□□□□ -1.69
SKP1-204ENST00000517691 P3H3Q8IVL6 736 aa4.5□□□□□ -1.69
SKP1-204ENST00000517691 SLC16A10Q8TF71 515 aa4.5□□□□□ -1.69
SKP1-204ENST00000517691 SNAPC4Q5SXM2 1469 aa4.49□□□□□ -1.69
SKP1-204ENST00000517691 KIF27Q86VH2 1401 aa4.49□□□□□ -1.69
SKP1-204ENST00000517691 ST8SIA5O15466 376 aa4.49□□□□□ -1.69
SKP1-204ENST00000517691 DHX30Q7L2E3 1194 aaKnown RBP eCLIP4.49□□□□□ -1.69
SKP1-204ENST00000517691 FAM9AQ8IZU1 332 aaPredicted RBP4.49□□□□□ -1.69
SKP1-204ENST00000517691 GSK3AP49840 483 aa4.48□□□□□ -1.69
SKP1-204ENST00000517691 NPM2Q86SE8 214 aaKnown RBP4.48□□□□□ -1.69
SKP1-204ENST00000517691 WDR70Q9NW82 654 aa4.48□□□□□ -1.69
SKP1-204ENST00000517691 GDF11O95390 407 aa4.48□□□□□ -1.69
SKP1-204ENST00000517691 TRIM26Q12899 539 aaPredicted RBP4.48□□□□□ -1.69
SKP1-204ENST00000517691 TMUB1Q9BVT8 246 aa4.48□□□□□ -1.69
SKP1-204ENST00000517691 TSR3Q9UJK0 312 aaKnown RBP4.48□□□□□ -1.69
SKP1-204ENST00000517691 IGF1RP08069 1367 aa4.47□□□□□ -1.69
SKP1-204ENST00000517691 GMPR2Q9P2T1 348 aaKnown RBP4.47□□□□□ -1.69
SKP1-204ENST00000517691 RABGEF1Q9UJ41 708 aa4.47□□□□□ -1.69
SKP1-204ENST00000517691 MAGI1Q96QZ7 1491 aaPredicted RBP4.47□□□□□ -1.69
SKP1-204ENST00000517691 TBC1D12O60347 775 aa4.46□□□□□ -1.69
SKP1-204ENST00000517691 TJAP1Q5JTD0 557 aa4.46□□□□□ -1.69
SKP1-204ENST00000517691 SYNJ2O15056 1496 aa4.46□□□□□ -1.69
SKP1-204ENST00000517691 WDR97A6NE52 1622 aa4.46□□□□□ -1.7
SKP1-204ENST00000517691 LMOD2Q6P5Q4 547 aa4.46□□□□□ -1.7
SKP1-204ENST00000517691 IL21Q9HBE4 155 aa4.46□□□□□ -1.7
SKP1-204ENST00000517691 FHAD1B1AJZ9 1412 aa4.46□□□□□ -1.7
SKP1-204ENST00000517691 ABCA5Q8WWZ7 1642 aa4.46□□□□□ -1.7
SKP1-204ENST00000517691 CARMIL1Q5VZK9 1371 aa4.45□□□□□ -1.7
SKP1-204ENST00000517691 RUSC2Q8N2Y8 1516 aa4.45□□□□□ -1.7
SKP1-204ENST00000517691 UBTFP17480 764 aaKnown RBP4.45□□□□□ -1.7
SKP1-204ENST00000517691 ERICH3Q5RHP9 1530 aa4.45□□□□□ -1.7
SKP1-204ENST00000517691 NLRP6P59044 892 aa4.45□□□□□ -1.7
SKP1-204ENST00000517691 RNF225M0QZC1 329 aaPredicted RBP4.44□□□□□ -1.7
SKP1-204ENST00000517691 RASSF7Q02833 373 aa4.44□□□□□ -1.7
SKP1-204ENST00000517691 ARHGEF1Q92888 912 aaKnown RBP4.44□□□□□ -1.7
SKP1-204ENST00000517691 PBRM1Q86U86 1689 aa4.43□□□□□ -1.7
SKP1-204ENST00000517691 HRCP23327 699 aa4.43□□□□□ -1.7
SKP1-204ENST00000517691 FOXK2Q01167 660 aa4.43□□□□□ -1.7
SKP1-204ENST00000517691 ZNF598Q86UK7 904 aaKnown RBP4.43□□□□□ -1.7
SKP1-204ENST00000517691 GRIN2AQ12879 1464 aa4.43□□□□□ -1.7
SKP1-204ENST00000517691 NCKAP5LQ9HCH0 1330 aa4.43□□□□□ -1.7
SKP1-204ENST00000517691 E2F4Q16254 413 aa4.43□□□□□ -1.7
SKP1-204ENST00000517691 CTC1Q2NKJ3 1217 aa4.43□□□□□ -1.7
SKP1-204ENST00000517691 GMPRP36959 345 aa4.42□□□□□ -1.7
SKP1-204ENST00000517691 SLC19A1P41440 591 aa4.42□□□□□ -1.7
SKP1-204ENST00000517691 CYB5RLQ6IPT4 315 aa4.42□□□□□ -1.7
SKP1-204ENST00000517691 TMC2Q8TDI7 906 aa4.42□□□□□ -1.7
SKP1-204ENST00000517691 JPH4Q96JJ6 628 aa4.42□□□□□ -1.7
SKP1-204ENST00000517691 ZFRQ96KR1 1074 aaKnown RBP4.42□□□□□ -1.7
SKP1-204ENST00000517691 ADAMTS12P58397 1594 aa4.42□□□□□ -1.7
SKP1-204ENST00000517691 TTBK1Q5TCY1 1321 aaPredicted RBP4.42□□□□□ -1.7
SKP1-204ENST00000517691 CHD1O14646 1710 aa4.42□□□□□ -1.7
SKP1-204ENST00000517691 TESPA1A2RU30 521 aaPredicted RBP4.41□□□□□ -1.7
SKP1-204ENST00000517691 SEMA3EO15041 775 aa4.41□□□□□ -1.7
SKP1-204ENST00000517691 IRF7Q92985 503 aa4.41□□□□□ -1.7
SKP1-204ENST00000517691 RAPGEF2Q9Y4G8 1499 aa4.41□□□□□ -1.7
SKP1-204ENST00000517691 NPAS3Q8IXF0 933 aa4.41□□□□□ -1.7
SKP1-204ENST00000517691 ZC3H15Q8WU90 426 aaKnown RBP4.41□□□□□ -1.7
SKP1-204ENST00000517691 EEA1Q15075 1411 aa4.41□□□□□ -1.7
SKP1-204ENST00000517691 ADAM23O75077 832 aa4.4□□□□□ -1.7
SKP1-204ENST00000517691 AVPP01185 164 aa4.4□□□□□ -1.7
SKP1-204ENST00000517691 NUP160Q12769 1436 aa4.4□□□□□ -1.71
SKP1-204ENST00000517691 CUL7Q14999 1698 aa4.39□□□□□ -1.71
SKP1-204ENST00000517691 AXIN1O15169 862 aa4.39□□□□□ -1.71
SKP1-204ENST00000517691 SMCPP49901 116 aaPredicted RBP4.39□□□□□ -1.71
SKP1-204ENST00000517691 MFSD10Q14728 455 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms