RNA–Protein interactions for RNA: ENST00000509751.1

HTT-207, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 723 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-207ENST00000509751 ZNF326Q5BKZ1 582 aaKnown RBP22.37■■□□□ 1.17
HTT-207ENST00000509751 BCANQ96GW7 911 aa22.36■■□□□ 1.17
HTT-207ENST00000509751 ZFYVE9O95405 1425 aa22.36■■□□□ 1.17
HTT-207ENST00000509751 TRIM26Q12899 539 aaPredicted RBP22.34■■□□□ 1.17
HTT-207ENST00000509751 HRCP23327 699 aa22.33■■□□□ 1.17
HTT-207ENST00000509751 CCDC144AA2RUR9 1427 aa22.32■■□□□ 1.16
HTT-207ENST00000509751 CERKQ8TCT0 537 aa22.32■■□□□ 1.16
HTT-207ENST00000509751 LTBP4Q8N2S1 1624 aa22.31■■□□□ 1.16
HTT-207ENST00000509751 HDGFP51858 240 aaKnown RBP22.31■■□□□ 1.16
HTT-207ENST00000509751 SLC26A8Q96RN1 970 aa22.31■■□□□ 1.16
HTT-207ENST00000509751 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.3■■□□□ 1.16
HTT-207ENST00000509751 KIF1BO60333 1816 aa22.29■■□□□ 1.16
HTT-207ENST00000509751 PLEKHG1Q9ULL1 1385 aa22.27■■□□□ 1.16
HTT-207ENST00000509751 RGL3Q3MIN7 710 aa22.24■■□□□ 1.15
HTT-207ENST00000509751 NEXMIFQ5QGS0 1516 aa22.24■■□□□ 1.15
HTT-207ENST00000509751 ANKRD30BQ9BXX2 1392 aa22.22■■□□□ 1.15
HTT-207ENST00000509751 STRCP1A6NGW2 1772 aa22.2■■□□□ 1.14
HTT-207ENST00000509751 SPATA31E1Q6ZUB1 1445 aa22.19■■□□□ 1.14
HTT-207ENST00000509751 ADAMTS13Q76LX8 1427 aa22.19■■□□□ 1.14
HTT-207ENST00000509751 CPS1P31327 1500 aa22.19■■□□□ 1.14
HTT-207ENST00000509751 RPGRIP1LQ68CZ1 1315 aa22.16■■□□□ 1.14
HTT-207ENST00000509751 ILDR1Q86SU0 546 aaPredicted RBP22.16■■□□□ 1.14
HTT-207ENST00000509751 TBX22Q9Y458 520 aa22.15■■□□□ 1.14
HTT-207ENST00000509751 NRXN3Q9Y4C0 1643 aa22.14■■□□□ 1.14
HTT-207ENST00000509751 VGFO15240 615 aaPredicted RBP22.14■■□□□ 1.13
HTT-207ENST00000509751 KCNA6P17658 529 aa22.14■■□□□ 1.13
HTT-207ENST00000509751 FBXO41Q8TF61 875 aa22.14■■□□□ 1.13
HTT-207ENST00000509751 SETBP1Q9Y6X0 1596 aa22.13■■□□□ 1.13
HTT-207ENST00000509751 PPLO60437 1756 aa22.13■■□□□ 1.13
HTT-207ENST00000509751 DIP2AQ14689 1571 aa22.12■■□□□ 1.13
HTT-207ENST00000509751 LRRC7Q96NW7 1537 aa22.12■■□□□ 1.13
HTT-207ENST00000509751 RBM33Q96EV2 1170 aaKnown RBP22.11■■□□□ 1.13
HTT-207ENST00000509751 ADGRF5Q8IZF2 1346 aa22.1■■□□□ 1.13
HTT-207ENST00000509751 IQSEC2Q5JU85 1478 aa22.1■■□□□ 1.13
HTT-207ENST00000509751 NWD1Q149M9 1564 aa22.09■■□□□ 1.13
HTT-207ENST00000509751 PROSER2Q86WR7 435 aaPredicted RBP22.09■■□□□ 1.13
HTT-207ENST00000509751 PCGF6Q9BYE7 350 aa22.08■■□□□ 1.13
HTT-207ENST00000509751 METP08581 1390 aa22.08■■□□□ 1.12
HTT-207ENST00000509751 UBAP1LF5GYI3 381 aa22.07■■□□□ 1.12
HTT-207ENST00000509751 DHX57Q6P158 1386 aaKnown RBP22.07■■□□□ 1.12
HTT-207ENST00000509751 PTPRUQ92729 1446 aa22.06■■□□□ 1.12
HTT-207ENST00000509751 IFT172Q9UG01 1749 aa22.06■■□□□ 1.12
HTT-207ENST00000509751 TMEM94Q12767 1356 aa22.06■■□□□ 1.12
HTT-207ENST00000509751 CHD2O14647 1828 aaKnown RBP22.06■■□□□ 1.12
HTT-207ENST00000509751 NKTRP30414 1462 aaKnown RBP22.05■■□□□ 1.12
HTT-207ENST00000509751 PHF23Q9BUL5 403 aaPredicted RBP22.05■■□□□ 1.12
HTT-207ENST00000509751 AMOTL2Q9Y2J4 779 aa22.05■■□□□ 1.12
HTT-207ENST00000509751 PIK3R4Q99570 1358 aa22.04■■□□□ 1.12
HTT-207ENST00000509751 ALKQ9UM73 1620 aa22.04■■□□□ 1.12
HTT-207ENST00000509751 KDM2AQ9Y2K7 1162 aa22.03■■□□□ 1.12
HTT-207ENST00000509751 DCAF11Q8TEB1 546 aa22.01■■□□□ 1.11
HTT-207ENST00000509751 SCAF1Q9H7N4 1312 aaKnown RBP22.01■■□□□ 1.11
HTT-207ENST00000509751 SIN3AQ96ST3 1273 aa22■■□□□ 1.11
HTT-207ENST00000509751 XIRP1Q702N8 1843 aaKnown RBP22■■□□□ 1.11
HTT-207ENST00000509751 MYOM2P54296 1465 aa22■■□□□ 1.11
HTT-207ENST00000509751 SETD1AO15047 1707 aaKnown RBP22■■□□□ 1.11
HTT-207ENST00000509751 PIK3C2GO75747 1445 aa21.99■■□□□ 1.11
HTT-207ENST00000509751 PIP4K2BP78356 416 aa21.99■■□□□ 1.11
HTT-207ENST00000509751 NEUROD1Q13562 356 aa21.98■■□□□ 1.11
HTT-207ENST00000509751 C14orf37Q86TY3 774 aa21.98■■□□□ 1.11
HTT-207ENST00000509751 XRN1Q8IZH2 1706 aaKnown RBP21.97■■□□□ 1.11
HTT-207ENST00000509751 TOM1O60784 492 aa21.97■■□□□ 1.11
HTT-207ENST00000509751 NRXN1Q9ULB1 1477 aa21.96■■□□□ 1.11
HTT-207ENST00000509751 CFAP70Q5T0N1 1121 aa21.95■■□□□ 1.1
HTT-207ENST00000509751 TMEM132EQ6IEE7 984 aa21.95■■□□□ 1.1
HTT-207ENST00000509751 STK26Q9P289 416 aa21.94■■□□□ 1.1
HTT-207ENST00000509751 MSH6P52701 1360 aa21.93■■□□□ 1.1
HTT-207ENST00000509751 ASXL1Q8IXJ9 1541 aa21.93■■□□□ 1.1
HTT-207ENST00000509751 C14orf93Q9H972 538 aaKnown RBP21.91■■□□□ 1.1
HTT-207ENST00000509751 ROBO2Q9HCK4 1378 aa21.9■■□□□ 1.1
HTT-207ENST00000509751 PTCH1Q13635 1447 aa21.88■■□□□ 1.09
HTT-207ENST00000509751 L3MBTL2Q969R5 705 aa21.87■■□□□ 1.09
HTT-207ENST00000509751 NCOA3Q9Y6Q9 1424 aa21.87■■□□□ 1.09
HTT-207ENST00000509751 LRPPRCP42704 1394 aaKnown RBP21.87■■□□□ 1.09
HTT-207ENST00000509751 LAMC1P11047 1609 aa21.86■■□□□ 1.09
HTT-207ENST00000509751 YTHDC2Q9H6S0 1430 aaKnown RBP21.86■■□□□ 1.09
HTT-207ENST00000509751 STAC3Q96MF2 364 aa21.85■■□□□ 1.09
HTT-207ENST00000509751 C19orf44Q9H6X5 657 aa21.84■■□□□ 1.09
HTT-207ENST00000509751 ATF3P18847 181 aa21.83■■□□□ 1.09
HTT-207ENST00000509751 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.83■■□□□ 1.08
HTT-207ENST00000509751 PRAG1Q86YV5 1406 aa21.82■■□□□ 1.08
HTT-207ENST00000509751 ADGRL3Q9HAR2 1447 aa21.82■■□□□ 1.08
HTT-207ENST00000509751 WAPLQ7Z5K2 1190 aa21.82■■□□□ 1.08
HTT-207ENST00000509751 ABCC11Q96J66 1382 aa21.82■■□□□ 1.08
HTT-207ENST00000509751 TECPR2O15040 1411 aa21.81■■□□□ 1.08
HTT-207ENST00000509751 PLEKHH1Q9ULM0 1364 aa21.81■■□□□ 1.08
HTT-207ENST00000509751 NALCNQ8IZF0 1738 aa21.8■■□□□ 1.08
HTT-207ENST00000509751 ADGRB1O14514 1584 aa21.8■■□□□ 1.08
HTT-207ENST00000509751 CADPS2Q86UW7 1296 aa21.8■■□□□ 1.08
HTT-207ENST00000509751 SLAIN2Q9P270 581 aa21.8■■□□□ 1.08
HTT-207ENST00000509751 HSPA1LP34931 641 aa21.79■■□□□ 1.08
HTT-207ENST00000509751 KNDC1Q76NI1 1749 aa21.78■■□□□ 1.08
HTT-207ENST00000509751 TONSLQ96HA7 1378 aa21.78■■□□□ 1.08
HTT-207ENST00000509751 TRAK1Q9UPV9 953 aa21.78■■□□□ 1.08
HTT-207ENST00000509751 SAFB2Q14151 953 aaKnown RBP eCLIP21.77■■□□□ 1.08
HTT-207ENST00000509751 DCCP43146 1447 aa21.76■■□□□ 1.07
HTT-207ENST00000509751 NBPF1Q3BBV0 1214 aa21.75■■□□□ 1.07
HTT-207ENST00000509751 PRAM1Q96QH2 718 aa21.75■■□□□ 1.07
HTT-207ENST00000509751 ROBO1Q9Y6N7 1651 aa21.75■■□□□ 1.07
HTT-207ENST00000509751 FAM135BQ49AJ0 1406 aa21.74■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms