RNA–Protein interactions for RNA: ENST00000504959.5

SNX25-203, Transcript of sorting nexin 25, humanhuman

TSL 2

Gene SNX25, Length 1,868 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX25-203ENST00000504959 MDM2Q00987 491 aaPredicted RBP8.49□□□□□ -1.05
SNX25-203ENST00000504959 DOK7Q18PE1 504 aa8.49□□□□□ -1.05
SNX25-203ENST00000504959 PROCA1Q8NCQ7 364 aaPredicted RBP8.49□□□□□ -1.05
SNX25-203ENST00000504959 HS3ST6Q96QI5 342 aa8.49□□□□□ -1.05
SNX25-203ENST00000504959 FAM205CA6NFA0 338 aa8.49□□□□□ -1.05
SNX25-203ENST00000504959 EVI5O60447 810 aa8.49□□□□□ -1.05
SNX25-203ENST00000504959 HOXB1P14653 301 aaPredicted RBP8.48□□□□□ -1.05
SNX25-203ENST00000504959 SKIV2LQ15477 1246 aaKnown RBP8.48□□□□□ -1.05
SNX25-203ENST00000504959 CCER1Q8TC90 406 aaPredicted RBP8.48□□□□□ -1.05
SNX25-203ENST00000504959 NPDC1Q9NQX5 325 aaPredicted RBP8.48□□□□□ -1.05
SNX25-203ENST00000504959 FANCD2Q9BXW9 1451 aa8.48□□□□□ -1.05
SNX25-203ENST00000504959 CLCN1P35523 988 aa8.47□□□□□ -1.05
SNX25-203ENST00000504959 SPNS2Q8IVW8 549 aa8.47□□□□□ -1.05
SNX25-203ENST00000504959 ZNF710Q8N1W2 664 aa8.47□□□□□ -1.05
SNX25-203ENST00000504959 GPCPD1Q9NPB8 672 aa8.47□□□□□ -1.05
SNX25-203ENST00000504959 CUX2O14529 1486 aa8.47□□□□□ -1.05
SNX25-203ENST00000504959 SSTR3P32745 418 aaPredicted RBP8.47□□□□□ -1.05
SNX25-203ENST00000504959 FGD5Q6ZNL6 1462 aa8.46□□□□□ -1.05
SNX25-203ENST00000504959 POLR3EQ9NVU0 708 aa8.46□□□□□ -1.06
SNX25-203ENST00000504959 TBC1D12O60347 775 aa8.45□□□□□ -1.06
SNX25-203ENST00000504959 BEGAINQ9BUH8 593 aa8.45□□□□□ -1.06
SNX25-203ENST00000504959 NESP48681 1621 aa8.45□□□□□ -1.06
SNX25-203ENST00000504959 DNMBPQ6XZF7 1577 aa8.44□□□□□ -1.06
SNX25-203ENST00000504959 NLRP7Q8WX94 980 aa8.44□□□□□ -1.06
SNX25-203ENST00000504959 CCDC97Q96F63 343 aaPredicted RBP8.44□□□□□ -1.06
SNX25-203ENST00000504959 KRTAP3-3Q9BYR6 98 aa8.44□□□□□ -1.06
SNX25-203ENST00000504959 KRTAP3-2Q9BYR7 98 aa8.44□□□□□ -1.06
SNX25-203ENST00000504959 PDS5BQ9NTI5 1447 aa8.44□□□□□ -1.06
SNX25-203ENST00000504959 ATP1B4Q9UN42 357 aaPredicted RBP8.44□□□□□ -1.06
SNX25-203ENST00000504959 RIMBP2O15034 1052 aa8.43□□□□□ -1.06
SNX25-203ENST00000504959 MMRN1Q13201 1228 aa8.43□□□□□ -1.06
SNX25-203ENST00000504959 TRAIPQ9BWF2 469 aa8.43□□□□□ -1.06
SNX25-203ENST00000504959 SERPINA10Q9UK55 444 aa8.43□□□□□ -1.06
SNX25-203ENST00000504959 RAD21O60216 631 aa8.43□□□□□ -1.06
SNX25-203ENST00000504959 FAM161AQ3B820 660 aa8.43□□□□□ -1.06
SNX25-203ENST00000504959 KCTD17Q8N5Z5 321 aa8.43□□□□□ -1.06
SNX25-203ENST00000504959 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.43□□□□□ -1.06
SNX25-203ENST00000504959 COG6Q9Y2V7 657 aa8.43□□□□□ -1.06
SNX25-203ENST00000504959 EN1Q05925 392 aaPredicted RBP8.42□□□□□ -1.06
SNX25-203ENST00000504959 ZSWIM6Q9HCJ5 1215 aa8.41□□□□□ -1.06
SNX25-203ENST00000504959 FAM217BQ9NTX9 383 aaPredicted RBP8.41□□□□□ -1.06
SNX25-203ENST00000504959 ERCC6Q03468 1493 aa8.41□□□□□ -1.06
SNX25-203ENST00000504959 ARAP1Q96P48 1450 aa8.41□□□□□ -1.06
SNX25-203ENST00000504959 IGF1RP08069 1367 aa8.41□□□□□ -1.06
SNX25-203ENST00000504959 MAP3K7O43318 606 aa8.4□□□□□ -1.06
SNX25-203ENST00000504959 TSR1Q2NL82 804 aaKnown RBP8.4□□□□□ -1.06
SNX25-203ENST00000504959 MYSM1Q5VVJ2 828 aa8.4□□□□□ -1.06
SNX25-203ENST00000504959 FBXO31Q5XUX0 539 aaPredicted RBP8.4□□□□□ -1.06
SNX25-203ENST00000504959 TOPBP1Q92547 1522 aa8.4□□□□□ -1.06
SNX25-203ENST00000504959 CARMIL1Q5VZK9 1371 aa8.4□□□□□ -1.06
SNX25-203ENST00000504959 SNRKQ9NRH2 765 aa8.4□□□□□ -1.07
SNX25-203ENST00000504959 ERBB3P21860 1342 aa8.4□□□□□ -1.07
SNX25-203ENST00000504959 SPDYE5A6NIY4 337 aa8.39□□□□□ -1.07
SNX25-203ENST00000504959 AEBP1Q8IUX7 1158 aa8.39□□□□□ -1.07
SNX25-203ENST00000504959 RBM33Q96EV2 1170 aaKnown RBP8.39□□□□□ -1.07
SNX25-203ENST00000504959 RETREG2Q8NC44 543 aa8.38□□□□□ -1.07
SNX25-203ENST00000504959 ANO8Q9HCE9 1232 aaPredicted RBP8.38□□□□□ -1.07
SNX25-203ENST00000504959 GPR153Q6NV75 609 aa8.38□□□□□ -1.07
SNX25-203ENST00000504959 METTL3Q86U44 580 aaKnown RBP8.38□□□□□ -1.07
SNX25-203ENST00000504959 PTCD2Q8WV60 388 aaKnown RBP8.38□□□□□ -1.07
SNX25-203ENST00000504959 POLA1P09884 1462 aaPredicted RBP8.38□□□□□ -1.07
SNX25-203ENST00000504959 RAD54L2Q9Y4B4 1467 aa8.38□□□□□ -1.07
SNX25-203ENST00000504959 ABCA10Q8WWZ4 1543 aa8.37□□□□□ -1.07
SNX25-203ENST00000504959 KIF21AQ7Z4S6 1674 aa8.37□□□□□ -1.07
SNX25-203ENST00000504959 CUL7Q14999 1698 aa8.36□□□□□ -1.07
SNX25-203ENST00000504959 ARHGAP35Q9NRY4 1499 aa8.36□□□□□ -1.07
SNX25-203ENST00000504959 RFC5P40937 340 aa8.36□□□□□ -1.07
SNX25-203ENST00000504959 CLK2P49760 499 aaKnown RBP8.36□□□□□ -1.07
SNX25-203ENST00000504959 ZNF330Q9Y3S2 320 aaPredicted RBP8.36□□□□□ -1.07
SNX25-203ENST00000504959 PHF14O94880 888 aa8.35□□□□□ -1.07
SNX25-203ENST00000504959 PCDHGA10Q9Y5H3 936 aa8.35□□□□□ -1.07
SNX25-203ENST00000504959 WDR97A6NE52 1622 aa8.35□□□□□ -1.07
SNX25-203ENST00000504959 URB2Q14146 1524 aaKnown RBP8.35□□□□□ -1.07
SNX25-203ENST00000504959 CTTNBP2Q8WZ74 1663 aa8.34□□□□□ -1.07
SNX25-203ENST00000504959 VARS2Q5ST30 1063 aaKnown RBP8.34□□□□□ -1.07
SNX25-203ENST00000504959 EPAS1Q99814 870 aa8.34□□□□□ -1.07
SNX25-203ENST00000504959 IRF5Q13568 498 aa8.34□□□□□ -1.07
SNX25-203ENST00000504959 MRC2Q9UBG0 1479 aa8.33□□□□□ -1.08
SNX25-203ENST00000504959 TBC1D2Q9BYX2 928 aa8.33□□□□□ -1.08
SNX25-203ENST00000504959 ARSIQ5FYB1 569 aa8.32□□□□□ -1.08
SNX25-203ENST00000504959 BANK1Q8NDB2 785 aa8.32□□□□□ -1.08
SNX25-203ENST00000504959 THOC2Q8NI27 1593 aaKnown RBP8.32□□□□□ -1.08
SNX25-203ENST00000504959 PXYLP1Q8TE99 480 aa8.32□□□□□ -1.08
SNX25-203ENST00000504959 LIMD1Q9UGP4 676 aa8.32□□□□□ -1.08
SNX25-203ENST00000504959 MTMR14Q8NCE2 650 aa8.32□□□□□ -1.08
SNX25-203ENST00000504959 GDPD2Q9HCC8 539 aa8.32□□□□□ -1.08
SNX25-203ENST00000504959 KANK4Q5T7N3 995 aaPredicted RBP8.31□□□□□ -1.08
SNX25-203ENST00000504959 PADI6Q6TGC4 694 aa8.31□□□□□ -1.08
SNX25-203ENST00000504959 ADGRG1Q9Y653 693 aa8.31□□□□□ -1.08
SNX25-203ENST00000504959 OATP04181 439 aa8.3□□□□□ -1.08
SNX25-203ENST00000504959 ZNF687Q8N1G0 1237 aa8.3□□□□□ -1.08
SNX25-203ENST00000504959 WDR62O43379 1518 aa8.3□□□□□ -1.08
SNX25-203ENST00000504959 ABCA5Q8WWZ7 1642 aa8.3□□□□□ -1.08
SNX25-203ENST00000504959 FHAD1B1AJZ9 1412 aa8.29□□□□□ -1.08
SNX25-203ENST00000504959 TIAM1Q13009 1591 aa8.29□□□□□ -1.08
SNX25-203ENST00000504959 GAPVD1Q14C86 1478 aa8.29□□□□□ -1.08
SNX25-203ENST00000504959 EFCAB5A4FU69 1503 aa8.28□□□□□ -1.08
SNX25-203ENST00000504959 SLC34A2O95436 690 aa8.28□□□□□ -1.08
SNX25-203ENST00000504959 TYW1BQ6NUM6 668 aa8.28□□□□□ -1.08
SNX25-203ENST00000504959 RGS22Q8NE09 1264 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms