RNA–Protein interactions for RNA: ENST00000503659.5

RNF4-204, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 558 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-204ENST00000503659 XIRP1Q702N8 1843 aaKnown RBP27.64■■■□□ 2.01
RNF4-204ENST00000503659 SCAF1Q9H7N4 1312 aaKnown RBP27.64■■■□□ 2.01
RNF4-204ENST00000503659 ALKQ9UM73 1620 aa27.63■■■□□ 2.01
RNF4-204ENST00000503659 TRPM2O94759 1503 aa27.59■■■□□ 2.01
RNF4-204ENST00000503659 HDGFP51858 240 aaKnown RBP27.59■■■□□ 2.01
RNF4-204ENST00000503659 CLTCL1P53675 1640 aa27.59■■■□□ 2.01
RNF4-204ENST00000503659 HSPA1LP34931 641 aa27.58■■■□□ 2.01
RNF4-204ENST00000503659 PLEKHG1Q9ULL1 1385 aa27.58■■■□□ 2.01
RNF4-204ENST00000503659 NWD1Q149M9 1564 aa27.57■■■□□ 2
RNF4-204ENST00000503659 CHGAP10645 457 aaKnown RBP27.57■■■□□ 2
RNF4-204ENST00000503659 SLC26A8Q96RN1 970 aa27.57■■■□□ 2
RNF4-204ENST00000503659 KCNA6P17658 529 aa27.55■■■□□ 2
RNF4-204ENST00000503659 CHD2O14647 1828 aaKnown RBP27.52■■■□□ 2
RNF4-204ENST00000503659 PPP1R15AO75807 674 aaPredicted RBP27.51■■□□□ 1.99
RNF4-204ENST00000503659 TRIM52Q96A61 297 aa27.51■■□□□ 1.99
RNF4-204ENST00000503659 ABCF1Q8NE71 845 aaKnown RBP eCLIP27.5■■□□□ 1.99
RNF4-204ENST00000503659 KIF1BO60333 1816 aa27.5■■□□□ 1.99
RNF4-204ENST00000503659 ILDR2Q71H61 639 aa27.49■■□□□ 1.99
RNF4-204ENST00000503659 SENP3Q9H4L4 574 aaPredicted RBP27.49■■□□□ 1.99
RNF4-204ENST00000503659 NKTRP30414 1462 aaKnown RBP27.49■■□□□ 1.99
RNF4-204ENST00000503659 DIP2AQ14689 1571 aa27.48■■□□□ 1.99
RNF4-204ENST00000503659 BCANQ96GW7 911 aa27.48■■□□□ 1.99
RNF4-204ENST00000503659 ADAMTS13Q76LX8 1427 aa27.48■■□□□ 1.99
RNF4-204ENST00000503659 NUTM2DQ5VT03 806 aaPredicted RBP27.47■■□□□ 1.99
RNF4-204ENST00000503659 NRXN3Q9Y4C0 1643 aa27.46■■□□□ 1.99
RNF4-204ENST00000503659 TMEM94Q12767 1356 aa27.46■■□□□ 1.99
RNF4-204ENST00000503659 PROSER2Q86WR7 435 aaPredicted RBP27.44■■□□□ 1.98
RNF4-204ENST00000503659 SLC4A1APQ9BWU0 796 aaKnown RBP27.44■■□□□ 1.98
RNF4-204ENST00000503659 NEXMIFQ5QGS0 1516 aa27.44■■□□□ 1.98
RNF4-204ENST00000503659 TBX22Q9Y458 520 aa27.42■■□□□ 1.98
RNF4-204ENST00000503659 SETBP1Q9Y6X0 1596 aa27.42■■□□□ 1.98
RNF4-204ENST00000503659 FAM135BQ49AJ0 1406 aa27.39■■□□□ 1.97
RNF4-204ENST00000503659 SOCS7O14512 581 aa27.38■■□□□ 1.97
RNF4-204ENST00000503659 MED1Q15648 1581 aaPredicted RBP27.38■■□□□ 1.97
RNF4-204ENST00000503659 ZNF326Q5BKZ1 582 aaKnown RBP27.36■■□□□ 1.97
RNF4-204ENST00000503659 RBM33Q96EV2 1170 aaKnown RBP27.36■■□□□ 1.97
RNF4-204ENST00000503659 PIK3R4Q99570 1358 aa27.35■■□□□ 1.97
RNF4-204ENST00000503659 SETD5Q9C0A6 1442 aa27.35■■□□□ 1.97
RNF4-204ENST00000503659 FOXD1Q16676 465 aa27.34■■□□□ 1.97
RNF4-204ENST00000503659 MSH6P52701 1360 aa27.33■■□□□ 1.97
RNF4-204ENST00000503659 XRN1Q8IZH2 1706 aaKnown RBP27.33■■□□□ 1.96
RNF4-204ENST00000503659 NCOA3Q9Y6Q9 1424 aa27.33■■□□□ 1.96
RNF4-204ENST00000503659 PPLO60437 1756 aa27.32■■□□□ 1.96
RNF4-204ENST00000503659 PTPRUQ92729 1446 aa27.32■■□□□ 1.96
RNF4-204ENST00000503659 MPHOSPH9Q99550 1183 aa27.31■■□□□ 1.96
RNF4-204ENST00000503659 SETD1AO15047 1707 aaKnown RBP27.29■■□□□ 1.96
RNF4-204ENST00000503659 RAB3GAP2Q9H2M9 1393 aa27.27■■□□□ 1.96
RNF4-204ENST00000503659 ROBO1Q9Y6N7 1651 aa27.26■■□□□ 1.95
RNF4-204ENST00000503659 CCDC144AA2RUR9 1427 aa27.24■■□□□ 1.95
RNF4-204ENST00000503659 IFT172Q9UG01 1749 aa27.24■■□□□ 1.95
RNF4-204ENST00000503659 METP08581 1390 aa27.24■■□□□ 1.95
RNF4-204ENST00000503659 SLAIN2Q9P270 581 aa27.23■■□□□ 1.95
RNF4-204ENST00000503659 SIPA1L2Q9P2F8 1722 aaPredicted RBP27.23■■□□□ 1.95
RNF4-204ENST00000503659 ACIN1Q9UKV3 1341 aaKnown RBP27.22■■□□□ 1.95
RNF4-204ENST00000503659 PHF23Q9BUL5 403 aaPredicted RBP27.22■■□□□ 1.95
RNF4-204ENST00000503659 AMOTL2Q9Y2J4 779 aa27.22■■□□□ 1.95
RNF4-204ENST00000503659 SPATA31E1Q6ZUB1 1445 aa27.21■■□□□ 1.95
RNF4-204ENST00000503659 RPGRIP1LQ68CZ1 1315 aa27.2■■□□□ 1.95
RNF4-204ENST00000503659 C19orf44Q9H6X5 657 aa27.18■■□□□ 1.94
RNF4-204ENST00000503659 VGFO15240 615 aaPredicted RBP27.17■■□□□ 1.94
RNF4-204ENST00000503659 C14orf37Q86TY3 774 aa27.17■■□□□ 1.94
RNF4-204ENST00000503659 CADPS2Q86UW7 1296 aa27.16■■□□□ 1.94
RNF4-204ENST00000503659 ATF3P18847 181 aa27.12■■□□□ 1.93
RNF4-204ENST00000503659 NALCNQ8IZF0 1738 aa27.12■■□□□ 1.93
RNF4-204ENST00000503659 DCCP43146 1447 aa27.09■■□□□ 1.93
RNF4-204ENST00000503659 PRAG1Q86YV5 1406 aa27.09■■□□□ 1.93
RNF4-204ENST00000503659 PHLPP1O60346 1717 aa27.08■■□□□ 1.93
RNF4-204ENST00000503659 RGL3Q3MIN7 710 aa27.08■■□□□ 1.93
RNF4-204ENST00000503659 ADGRF5Q8IZF2 1346 aa27.08■■□□□ 1.93
RNF4-204ENST00000503659 PTCH1Q13635 1447 aa27.07■■□□□ 1.92
RNF4-204ENST00000503659 ANKRD30BQ9BXX2 1392 aa27.06■■□□□ 1.92
RNF4-204ENST00000503659 ADGRL3Q9HAR2 1447 aa27.05■■□□□ 1.92
RNF4-204ENST00000503659 JCADQ9P266 1359 aa27.04■■□□□ 1.92
RNF4-204ENST00000503659 PIK3C2GO75747 1445 aa27.03■■□□□ 1.92
RNF4-204ENST00000503659 HRCP23327 699 aa27.03■■□□□ 1.92
RNF4-204ENST00000503659 COL16A1Q07092 1604 aaPredicted RBP27.03■■□□□ 1.92
RNF4-204ENST00000503659 ASXL1Q8IXJ9 1541 aa27.03■■□□□ 1.92
RNF4-204ENST00000503659 ROBO2Q9HCK4 1378 aa27.02■■□□□ 1.92
RNF4-204ENST00000503659 AHDC1Q5TGY3 1603 aaPredicted RBP27.01■■□□□ 1.91
RNF4-204ENST00000503659 MST1RQ04912 1400 aa27■■□□□ 1.91
RNF4-204ENST00000503659 RGS17Q9UGC6 210 aaPredicted RBP26.99■■□□□ 1.91
RNF4-204ENST00000503659 MYOM2P54296 1465 aa26.99■■□□□ 1.91
RNF4-204ENST00000503659 NRXN1Q9ULB1 1477 aa26.99■■□□□ 1.91
RNF4-204ENST00000503659 KNDC1Q76NI1 1749 aa26.99■■□□□ 1.91
RNF4-204ENST00000503659 LAMC1P11047 1609 aa26.95■■□□□ 1.91
RNF4-204ENST00000503659 BRINP3Q76B58 766 aa26.95■■□□□ 1.9
RNF4-204ENST00000503659 TECPR2O15040 1411 aa26.94■■□□□ 1.9
RNF4-204ENST00000503659 NHSL1Q5SYE7 1610 aa26.94■■□□□ 1.9
RNF4-204ENST00000503659 SPATA31A6Q5VVP1 1343 aa26.93■■□□□ 1.9
RNF4-204ENST00000503659 LRPPRCP42704 1394 aaKnown RBP26.9■■□□□ 1.9
RNF4-204ENST00000503659 SHPRHQ149N8 1683 aa26.89■■□□□ 1.89
RNF4-204ENST00000503659 CDC42BPGQ6DT37 1551 aa26.88■■□□□ 1.89
RNF4-204ENST00000503659 TMEM132EQ6IEE7 984 aa26.87■■□□□ 1.89
RNF4-204ENST00000503659 C1orf167Q5SNV9 1468 aa26.87■■□□□ 1.89
RNF4-204ENST00000503659 YTHDC2Q9H6S0 1430 aaKnown RBP26.86■■□□□ 1.89
RNF4-204ENST00000503659 ABCC11Q96J66 1382 aa26.85■■□□□ 1.89
RNF4-204ENST00000503659 C14orf93Q9H972 538 aaKnown RBP26.85■■□□□ 1.89
RNF4-204ENST00000503659 POTEAQ6S8J7 498 aa26.84■■□□□ 1.89
RNF4-204ENST00000503659 STK26Q9P289 416 aa26.84■■□□□ 1.89
RNF4-204ENST00000503659 CFAP70Q5T0N1 1121 aa26.82■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms