RNA–Protein interactions for RNA: ENST00000503123.5

RNF4-203, Transcript of ring finger protein 4, humanhuman

TSL 5

Gene RNF4, Length 298 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-203ENST00000503123 DIP2AQ14689 1571 aa13.15□□□□□ -0.3
RNF4-203ENST00000503123 SETD5Q9C0A6 1442 aa13.15□□□□□ -0.3
RNF4-203ENST00000503123 RIMS2Q9UQ26 1411 aa13.14□□□□□ -0.31
RNF4-203ENST00000503123 HDGFP51858 240 aaKnown RBP13.14□□□□□ -0.31
RNF4-203ENST00000503123 TRIM52Q96A61 297 aa13.14□□□□□ -0.31
RNF4-203ENST00000503123 NWD1Q149M9 1564 aa13.14□□□□□ -0.31
RNF4-203ENST00000503123 PPLO60437 1756 aa13.14□□□□□ -0.31
RNF4-203ENST00000503123 PLEKHG1Q9ULL1 1385 aa13.13□□□□□ -0.31
RNF4-203ENST00000503123 SLC4A1APQ9BWU0 796 aaKnown RBP13.13□□□□□ -0.31
RNF4-203ENST00000503123 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.12□□□□□ -0.31
RNF4-203ENST00000503123 IFT172Q9UG01 1749 aa13.11□□□□□ -0.31
RNF4-203ENST00000503123 NRXN3Q9Y4C0 1643 aa13.11□□□□□ -0.31
RNF4-203ENST00000503123 NEXMIFQ5QGS0 1516 aa13.11□□□□□ -0.31
RNF4-203ENST00000503123 SETBP1Q9Y6X0 1596 aa13.11□□□□□ -0.31
RNF4-203ENST00000503123 NKTRP30414 1462 aaKnown RBP13.1□□□□□ -0.31
RNF4-203ENST00000503123 RAB3GAP2Q9H2M9 1393 aa13.09□□□□□ -0.31
RNF4-203ENST00000503123 LRRC7Q96NW7 1537 aa13.09□□□□□ -0.31
RNF4-203ENST00000503123 PPP1R15AO75807 674 aaPredicted RBP13.08□□□□□ -0.32
RNF4-203ENST00000503123 CHGAP10645 457 aaKnown RBP13.08□□□□□ -0.32
RNF4-203ENST00000503123 SETD1AO15047 1707 aaKnown RBP13.08□□□□□ -0.32
RNF4-203ENST00000503123 HRCP23327 699 aa13.07□□□□□ -0.32
RNF4-203ENST00000503123 MPHOSPH9Q99550 1183 aa13.07□□□□□ -0.32
RNF4-203ENST00000503123 PIK3R4Q99570 1358 aa13.06□□□□□ -0.32
RNF4-203ENST00000503123 CCDC144AA2RUR9 1427 aa13.05□□□□□ -0.32
RNF4-203ENST00000503123 ADAMTS13Q76LX8 1427 aa13.05□□□□□ -0.32
RNF4-203ENST00000503123 XRN1Q8IZH2 1706 aaKnown RBP13.05□□□□□ -0.32
RNF4-203ENST00000503123 KCNA6P17658 529 aa13.05□□□□□ -0.32
RNF4-203ENST00000503123 TBX22Q9Y458 520 aa13.05□□□□□ -0.32
RNF4-203ENST00000503123 ALKQ9UM73 1620 aa13.05□□□□□ -0.32
RNF4-203ENST00000503123 SLC26A8Q96RN1 970 aa13.04□□□□□ -0.32
RNF4-203ENST00000503123 RPGRIP1LQ68CZ1 1315 aa13.03□□□□□ -0.32
RNF4-203ENST00000503123 ZNF326Q5BKZ1 582 aaKnown RBP13.02□□□□□ -0.33
RNF4-203ENST00000503123 BCANQ96GW7 911 aa13.02□□□□□ -0.33
RNF4-203ENST00000503123 SPATA31E1Q6ZUB1 1445 aa13.02□□□□□ -0.33
RNF4-203ENST00000503123 UBAP1LF5GYI3 381 aa13.01□□□□□ -0.33
RNF4-203ENST00000503123 TOM1O60784 492 aa13.01□□□□□ -0.33
RNF4-203ENST00000503123 NCOA3Q9Y6Q9 1424 aa13□□□□□ -0.33
RNF4-203ENST00000503123 FOXD1Q16676 465 aa13□□□□□ -0.33
RNF4-203ENST00000503123 VGFO15240 615 aaPredicted RBP12.99□□□□□ -0.33
RNF4-203ENST00000503123 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.99□□□□□ -0.33
RNF4-203ENST00000503123 TMEM94Q12767 1356 aa12.98□□□□□ -0.33
RNF4-203ENST00000503123 NUTM2DQ5VT03 806 aaPredicted RBP12.98□□□□□ -0.33
RNF4-203ENST00000503123 LAMC1P11047 1609 aa12.98□□□□□ -0.33
RNF4-203ENST00000503123 ANKRD30BQ9BXX2 1392 aa12.97□□□□□ -0.33
RNF4-203ENST00000503123 PRAG1Q86YV5 1406 aa12.96□□□□□ -0.33
RNF4-203ENST00000503123 PROSER2Q86WR7 435 aaPredicted RBP12.96□□□□□ -0.33
RNF4-203ENST00000503123 KNDC1Q76NI1 1749 aa12.96□□□□□ -0.34
RNF4-203ENST00000503123 PTPRUQ92729 1446 aa12.96□□□□□ -0.34
RNF4-203ENST00000503123 NALCNQ8IZF0 1738 aa12.94□□□□□ -0.34
RNF4-203ENST00000503123 ROBO1Q9Y6N7 1651 aa12.94□□□□□ -0.34
RNF4-203ENST00000503123 MYOM2P54296 1465 aa12.94□□□□□ -0.34
RNF4-203ENST00000503123 MSH6P52701 1360 aa12.94□□□□□ -0.34
RNF4-203ENST00000503123 NRXN1Q9ULB1 1477 aa12.93□□□□□ -0.34
RNF4-203ENST00000503123 METP08581 1390 aa12.93□□□□□ -0.34
RNF4-203ENST00000503123 PIK3C2GO75747 1445 aa12.92□□□□□ -0.34
RNF4-203ENST00000503123 DCCP43146 1447 aa12.92□□□□□ -0.34
RNF4-203ENST00000503123 PTCH1Q13635 1447 aa12.92□□□□□ -0.34
RNF4-203ENST00000503123 SENP3Q9H4L4 574 aaPredicted RBP12.92□□□□□ -0.34
RNF4-203ENST00000503123 AMOTL2Q9Y2J4 779 aa12.92□□□□□ -0.34
RNF4-203ENST00000503123 FAM135BQ49AJ0 1406 aa12.91□□□□□ -0.34
RNF4-203ENST00000503123 PIP4K2BP78356 416 aa12.9□□□□□ -0.34
RNF4-203ENST00000503123 RGL3Q3MIN7 710 aa12.89□□□□□ -0.35
RNF4-203ENST00000503123 SCAF1Q9H7N4 1312 aaKnown RBP12.88□□□□□ -0.35
RNF4-203ENST00000503123 ASXL1Q8IXJ9 1541 aa12.88□□□□□ -0.35
RNF4-203ENST00000503123 STAC3Q96MF2 364 aa12.88□□□□□ -0.35
RNF4-203ENST00000503123 C19orf44Q9H6X5 657 aa12.88□□□□□ -0.35
RNF4-203ENST00000503123 PHLPP1O60346 1717 aa12.88□□□□□ -0.35
RNF4-203ENST00000503123 KIAA1210Q9ULL0 1709 aa12.88□□□□□ -0.35
RNF4-203ENST00000503123 TECPR2O15040 1411 aa12.88□□□□□ -0.35
RNF4-203ENST00000503123 ADGRL3Q9HAR2 1447 aa12.88□□□□□ -0.35
RNF4-203ENST00000503123 ADGRF5Q8IZF2 1346 aa12.88□□□□□ -0.35
RNF4-203ENST00000503123 CADPS2Q86UW7 1296 aa12.86□□□□□ -0.35
RNF4-203ENST00000503123 RBM33Q96EV2 1170 aaKnown RBP12.86□□□□□ -0.35
RNF4-203ENST00000503123 HSPA1LP34931 641 aa12.85□□□□□ -0.35
RNF4-203ENST00000503123 NHSL1Q5SYE7 1610 aa12.84□□□□□ -0.35
RNF4-203ENST00000503123 AHDC1Q5TGY3 1603 aaPredicted RBP12.84□□□□□ -0.35
RNF4-203ENST00000503123 C14orf37Q86TY3 774 aa12.84□□□□□ -0.35
RNF4-203ENST00000503123 SLAIN2Q9P270 581 aa12.84□□□□□ -0.35
RNF4-203ENST00000503123 CDC42BPGQ6DT37 1551 aa12.84□□□□□ -0.35
RNF4-203ENST00000503123 LRPPRCP42704 1394 aaKnown RBP12.83□□□□□ -0.36
RNF4-203ENST00000503123 ABCC11Q96J66 1382 aa12.83□□□□□ -0.36
RNF4-203ENST00000503123 ROBO2Q9HCK4 1378 aa12.83□□□□□ -0.36
RNF4-203ENST00000503123 ATF3P18847 181 aa12.83□□□□□ -0.36
RNF4-203ENST00000503123 TRIM26Q12899 539 aaPredicted RBP12.83□□□□□ -0.36
RNF4-203ENST00000503123 COL16A1Q07092 1604 aaPredicted RBP12.83□□□□□ -0.36
RNF4-203ENST00000503123 YTHDC2Q9H6S0 1430 aaKnown RBP12.82□□□□□ -0.36
RNF4-203ENST00000503123 C14orf93Q9H972 538 aaKnown RBP12.82□□□□□ -0.36
RNF4-203ENST00000503123 DLC1Q96QB1 1528 aa12.82□□□□□ -0.36
RNF4-203ENST00000503123 ADGRB1O14514 1584 aa12.81□□□□□ -0.36
RNF4-203ENST00000503123 MST1RQ04912 1400 aa12.81□□□□□ -0.36
RNF4-203ENST00000503123 ARHGEF28Q8N1W1 1705 aaKnown RBP12.81□□□□□ -0.36
RNF4-203ENST00000503123 FMN2Q9NZ56 1722 aa12.81□□□□□ -0.36
RNF4-203ENST00000503123 RGPD8O14715 1765 aaPredicted RBP12.81□□□□□ -0.36
RNF4-203ENST00000503123 MED1Q15648 1581 aaPredicted RBP12.81□□□□□ -0.36
RNF4-203ENST00000503123 SHPRHQ149N8 1683 aa12.8□□□□□ -0.36
RNF4-203ENST00000503123 DHX57Q6P158 1386 aaKnown RBP12.8□□□□□ -0.36
RNF4-203ENST00000503123 SIRT1Q96EB6 747 aa12.79□□□□□ -0.36
RNF4-203ENST00000503123 DCAF11Q8TEB1 546 aa12.78□□□□□ -0.36
RNF4-203ENST00000503123 ADGRB2O60241 1585 aa12.77□□□□□ -0.36
RNF4-203ENST00000503123 CFAP70Q5T0N1 1121 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 80.3 ms