RNA–Protein interactions for RNA: ENST00000497374.1

SPTSSB-203, Transcript of serine palmitoyltransferase small subunit B, humanhuman

TSL 2

Gene SPTSSB, Length 679 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSB-203ENST00000497374 TATDN2Q93075 761 aa8.57□□□□□ -1.04
SPTSSB-203ENST00000497374 NBPF26B4DH59 902 aa8.56□□□□□ -1.04
SPTSSB-203ENST00000497374 CERKQ8TCT0 537 aa8.56□□□□□ -1.04
SPTSSB-203ENST00000497374 OSBPP22059 807 aa8.55□□□□□ -1.04
SPTSSB-203ENST00000497374 PPP1R18Q6NYC8 613 aa8.55□□□□□ -1.04
SPTSSB-203ENST00000497374 ZNF516Q92618 1163 aa8.55□□□□□ -1.04
SPTSSB-203ENST00000497374 PRKD2Q9BZL6 878 aa8.55□□□□□ -1.04
SPTSSB-203ENST00000497374 IL21Q9HBE4 155 aa8.55□□□□□ -1.04
SPTSSB-203ENST00000497374 PNMA3Q9UL41 463 aa8.55□□□□□ -1.04
SPTSSB-203ENST00000497374 GFRA3O60609 400 aa8.54□□□□□ -1.04
SPTSSB-203ENST00000497374 APLP1P51693 650 aa8.54□□□□□ -1.04
SPTSSB-203ENST00000497374 E2F4Q16254 413 aa8.54□□□□□ -1.04
SPTSSB-203ENST00000497374 RBM27Q9P2N5 1060 aaKnown RBP8.54□□□□□ -1.04
SPTSSB-203ENST00000497374 GRXCR2A6NFK2 248 aa8.53□□□□□ -1.04
SPTSSB-203ENST00000497374 TRAF7Q6Q0C0 670 aa8.52□□□□□ -1.05
SPTSSB-203ENST00000497374 NUDT18Q6ZVK8 323 aa8.52□□□□□ -1.05
SPTSSB-203ENST00000497374 TTC13Q8NBP0 860 aa8.52□□□□□ -1.05
SPTSSB-203ENST00000497374 NRG2O14511 850 aaPredicted RBP8.51□□□□□ -1.05
SPTSSB-203ENST00000497374 V9GY48 417 aaPredicted RBP8.51□□□□□ -1.05
SPTSSB-203ENST00000497374 AQRO60306 1485 aaKnown RBP eCLIP8.51□□□□□ -1.05
SPTSSB-203ENST00000497374 CLASP1Q7Z460 1538 aa8.5□□□□□ -1.05
SPTSSB-203ENST00000497374 TOPBP1Q92547 1522 aa8.5□□□□□ -1.05
SPTSSB-203ENST00000497374 ABCC8Q09428 1581 aa8.5□□□□□ -1.05
SPTSSB-203ENST00000497374 NKX2-3Q8TAU0 364 aa8.5□□□□□ -1.05
SPTSSB-203ENST00000497374 NPDC1Q9NQX5 325 aaPredicted RBP8.5□□□□□ -1.05
SPTSSB-203ENST00000497374 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.49□□□□□ -1.05
SPTSSB-203ENST00000497374 WIZO95785 1651 aa8.49□□□□□ -1.05
SPTSSB-203ENST00000497374 RNF40O75150 1001 aa8.48□□□□□ -1.05
SPTSSB-203ENST00000497374 SPRYD3Q8NCJ5 442 aa8.48□□□□□ -1.05
SPTSSB-203ENST00000497374 GAPVD1Q14C86 1478 aa8.48□□□□□ -1.05
SPTSSB-203ENST00000497374 SYNJ1O43426 1573 aa8.48□□□□□ -1.05
SPTSSB-203ENST00000497374 PRDM2Q13029 1718 aa8.47□□□□□ -1.05
SPTSSB-203ENST00000497374 SWT1Q5T5J6 900 aaKnown RBP8.47□□□□□ -1.05
SPTSSB-203ENST00000497374 PADI6Q6TGC4 694 aa8.47□□□□□ -1.05
SPTSSB-203ENST00000497374 TARBP1Q13395 1621 aaKnown RBP8.45□□□□□ -1.06
SPTSSB-203ENST00000497374 DNMBPQ6XZF7 1577 aa8.44□□□□□ -1.06
SPTSSB-203ENST00000497374 COPS2P61201 443 aa8.44□□□□□ -1.06
SPTSSB-203ENST00000497374 CHMP7Q8WUX9 453 aaPredicted RBP8.44□□□□□ -1.06
SPTSSB-203ENST00000497374 EYA1Q99502 592 aa8.43□□□□□ -1.06
SPTSSB-203ENST00000497374 EMID1Q96A84 441 aaPredicted RBP8.42□□□□□ -1.06
SPTSSB-203ENST00000497374 SNAPC4Q5SXM2 1469 aa8.41□□□□□ -1.06
SPTSSB-203ENST00000497374 MAGI1Q96QZ7 1491 aaPredicted RBP8.41□□□□□ -1.06
SPTSSB-203ENST00000497374 SLF2Q8IX21 1173 aa8.41□□□□□ -1.06
SPTSSB-203ENST00000497374 TOP2AP11388 1531 aaKnown RBP8.4□□□□□ -1.06
SPTSSB-203ENST00000497374 ZPR1O75312 459 aa8.4□□□□□ -1.06
SPTSSB-203ENST00000497374 HDGFP51858 240 aaKnown RBP8.4□□□□□ -1.06
SPTSSB-203ENST00000497374 TRIM67Q6ZTA4 783 aa8.4□□□□□ -1.06
SPTSSB-203ENST00000497374 WDR70Q9NW82 654 aa8.4□□□□□ -1.06
SPTSSB-203ENST00000497374 PDZRN3Q9UPQ7 1066 aa8.4□□□□□ -1.06
SPTSSB-203ENST00000497374 NECTIN2Q92692 538 aa8.39□□□□□ -1.07
SPTSSB-203ENST00000497374 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.39□□□□□ -1.07
SPTSSB-203ENST00000497374 WDR97A6NE52 1622 aa8.39□□□□□ -1.07
SPTSSB-203ENST00000497374 POLA1P09884 1462 aaPredicted RBP8.38□□□□□ -1.07
SPTSSB-203ENST00000497374 TDRD9Q8NDG6 1382 aaKnown RBP8.38□□□□□ -1.07
SPTSSB-203ENST00000497374 PAXIP1Q6ZW49 1069 aaPredicted RBP8.38□□□□□ -1.07
SPTSSB-203ENST00000497374 TMUB1Q9BVT8 246 aa8.38□□□□□ -1.07
SPTSSB-203ENST00000497374 ERCC6L2Q5T890 1561 aa8.38□□□□□ -1.07
SPTSSB-203ENST00000497374 SYNJ2O15056 1496 aa8.38□□□□□ -1.07
SPTSSB-203ENST00000497374 CFAP44Q96MT7 982 aa8.37□□□□□ -1.07
SPTSSB-203ENST00000497374 KIF13AQ9H1H9 1805 aa8.37□□□□□ -1.07
SPTSSB-203ENST00000497374 TLL1O43897 1013 aa8.36□□□□□ -1.07
SPTSSB-203ENST00000497374 GGCXP38435 758 aa8.36□□□□□ -1.07
SPTSSB-203ENST00000497374 MLLT3P42568 568 aaPredicted RBP8.36□□□□□ -1.07
SPTSSB-203ENST00000497374 BLOC1S3Q6QNY0 202 aa8.36□□□□□ -1.07
SPTSSB-203ENST00000497374 FBXO41Q8TF61 875 aa8.36□□□□□ -1.07
SPTSSB-203ENST00000497374 RNF223E7ERA6 249 aa8.35□□□□□ -1.07
SPTSSB-203ENST00000497374 PCDHB3Q9Y5E6 796 aa8.35□□□□□ -1.07
SPTSSB-203ENST00000497374 GRIN2BQ13224 1484 aa8.34□□□□□ -1.07
SPTSSB-203ENST00000497374 RAD54L2Q9Y4B4 1467 aa8.34□□□□□ -1.07
SPTSSB-203ENST00000497374 SOGA1O94964 1423 aa8.34□□□□□ -1.07
SPTSSB-203ENST00000497374 PTGDRQ13258 359 aa8.33□□□□□ -1.08
SPTSSB-203ENST00000497374 ZNF787Q6DD87 383 aa8.33□□□□□ -1.08
SPTSSB-203ENST00000497374 FAM69CQ0P6D2 419 aa8.32□□□□□ -1.08
SPTSSB-203ENST00000497374 PRR14Q9BWN1 585 aa8.32□□□□□ -1.08
SPTSSB-203ENST00000497374 TMEM134Q9H6X4 195 aa8.32□□□□□ -1.08
SPTSSB-203ENST00000497374 KDM6BO15054 1643 aa8.32□□□□□ -1.08
SPTSSB-203ENST00000497374 HECW2Q9P2P5 1572 aa8.31□□□□□ -1.08
SPTSSB-203ENST00000497374 DNAJB2P25686 324 aa8.31□□□□□ -1.08
SPTSSB-203ENST00000497374 ADGRG1Q9Y653 693 aa8.31□□□□□ -1.08
SPTSSB-203ENST00000497374 ABCC10Q5T3U5 1492 aa8.31□□□□□ -1.08
SPTSSB-203ENST00000497374 SLC19A1P41440 591 aa8.3□□□□□ -1.08
SPTSSB-203ENST00000497374 SPRYD7Q5W111 196 aa8.3□□□□□ -1.08
SPTSSB-203ENST00000497374 ZNF775Q96BV0 537 aaPredicted RBP8.3□□□□□ -1.08
SPTSSB-203ENST00000497374 CCDC88BA6NC98 1476 aa8.3□□□□□ -1.08
SPTSSB-203ENST00000497374 SLC4A3P48751 1232 aa8.29□□□□□ -1.08
SPTSSB-203ENST00000497374 PRR20EP86478 221 aa8.29□□□□□ -1.08
SPTSSB-203ENST00000497374 PRR20CP86479 221 aa8.29□□□□□ -1.08
SPTSSB-203ENST00000497374 PRR20DP86480 221 aa8.29□□□□□ -1.08
SPTSSB-203ENST00000497374 PRR20BP86481 221 aa8.29□□□□□ -1.08
SPTSSB-203ENST00000497374 PRR20AP86496 221 aa8.29□□□□□ -1.08
SPTSSB-203ENST00000497374 ANKLE1Q8NAG6 615 aa8.29□□□□□ -1.08
SPTSSB-203ENST00000497374 KCNV2Q8TDN2 545 aa8.29□□□□□ -1.08
SPTSSB-203ENST00000497374 LMTK3Q96Q04 1460 aa8.29□□□□□ -1.08
SPTSSB-203ENST00000497374 PPEF1O14829 653 aaPredicted RBP8.28□□□□□ -1.08
SPTSSB-203ENST00000497374 ACTN4O43707 911 aaKnown RBP8.28□□□□□ -1.08
SPTSSB-203ENST00000497374 S1PR4O95977 384 aa8.28□□□□□ -1.08
SPTSSB-203ENST00000497374 MYT1Q01538 1121 aa8.28□□□□□ -1.08
SPTSSB-203ENST00000497374 LIAT1Q6ZQX7 453 aa8.28□□□□□ -1.08
SPTSSB-203ENST00000497374 CEP170Q5SW79 1584 aa8.27□□□□□ -1.09
SPTSSB-203ENST00000497374 ADGRL1O94910 1474 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms