RNA–Protein interactions for RNA: ENST00000497374.1

SPTSSB-203, Transcript of serine palmitoyltransferase small subunit B, humanhuman

TSL 2

Gene SPTSSB, Length 679 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSB-203ENST00000497374 AEBP2Q6ZN18 517 aaPredicted RBP22.49■■□□□ 1.19
SPTSSB-203ENST00000497374 CHIC1Q5VXU3 224 aa21.14■□□□□ 0.97
SPTSSB-203ENST00000497374 SENP3Q9H4L4 574 aaPredicted RBP19.1■□□□□ 0.65
SPTSSB-203ENST00000497374 PHF23Q9BUL5 403 aaPredicted RBP18.85■□□□□ 0.61
SPTSSB-203ENST00000497374 FOXD1Q16676 465 aa17.88■□□□□ 0.45
SPTSSB-203ENST00000497374 PLPPR3Q6T4P5 718 aa16.77■□□□□ 0.28
SPTSSB-203ENST00000497374 MSH5O43196 834 aa16.72■□□□□ 0.27
SPTSSB-203ENST00000497374 POTEDQ86YR6 584 aa16.66■□□□□ 0.26
SPTSSB-203ENST00000497374 PIAS4Q8N2W9 510 aaPredicted RBP16.62■□□□□ 0.25
SPTSSB-203ENST00000497374 PPP6R1Q9UPN7 881 aa16.62■□□□□ 0.25
SPTSSB-203ENST00000497374 ADRA2BP18089 450 aa16.52■□□□□ 0.24
SPTSSB-203ENST00000497374 MAPK8IP2Q13387 824 aaPredicted RBP15.23■□□□□ 0.03
SPTSSB-203ENST00000497374 DMRT2Q9Y5R5 561 aa15.16■□□□□ 0.02
SPTSSB-203ENST00000497374 SCAF1Q9H7N4 1312 aaKnown RBP15□□□□□ -0.01
SPTSSB-203ENST00000497374 PPP4R3CPQ6ZMV5 832 aa14.69□□□□□ -0.06
SPTSSB-203ENST00000497374 HOXD11P31277 338 aaPredicted RBP14.55□□□□□ -0.08
SPTSSB-203ENST00000497374 DCAF8L1A6NGE4 600 aa14.45□□□□□ -0.1
SPTSSB-203ENST00000497374 CNKSR2Q8WXI2 1034 aa14.44□□□□□ -0.1
SPTSSB-203ENST00000497374 CACNB1Q02641 598 aaPredicted RBP14.43□□□□□ -0.1
SPTSSB-203ENST00000497374 RNF216Q9NWF9 866 aaPredicted RBP14.36□□□□□ -0.11
SPTSSB-203ENST00000497374 RNF39Q9H2S5 420 aa14.31□□□□□ -0.12
SPTSSB-203ENST00000497374 DNAJC5BQ9UF47 199 aa14.06□□□□□ -0.16
SPTSSB-203ENST00000497374 C1QBPQ07021 282 aaKnown RBP14.04□□□□□ -0.16
SPTSSB-203ENST00000497374 NCBP3Q53F19 620 aaKnown RBP14□□□□□ -0.17
SPTSSB-203ENST00000497374 NPM3O75607 178 aaKnown RBP13.91□□□□□ -0.18
SPTSSB-203ENST00000497374 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.77□□□□□ -0.21
SPTSSB-203ENST00000497374 U3KPZ7 1027 aaPredicted RBP13.57□□□□□ -0.24
SPTSSB-203ENST00000497374 KCNA4P22459 653 aa13.5□□□□□ -0.25
SPTSSB-203ENST00000497374 SPINK5Q9NQ38 1064 aaPredicted RBP13.41□□□□□ -0.26
SPTSSB-203ENST00000497374 SLC4A2P04920 1241 aa13.35□□□□□ -0.27
SPTSSB-203ENST00000497374 DSG3P32926 999 aa13.35□□□□□ -0.27
SPTSSB-203ENST00000497374 CAPN15O75808 1086 aa13.31□□□□□ -0.28
SPTSSB-203ENST00000497374 TRHP20396 242 aaPredicted RBP13.07□□□□□ -0.32
SPTSSB-203ENST00000497374 ZNF219Q9P2Y4 722 aaPredicted RBP13.05□□□□□ -0.32
SPTSSB-203ENST00000497374 ABCB7O75027 752 aa13.03□□□□□ -0.32
SPTSSB-203ENST00000497374 APLP2Q06481 763 aa13.02□□□□□ -0.33
SPTSSB-203ENST00000497374 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13□□□□□ -0.33
SPTSSB-203ENST00000497374 HNRNPUL2Q1KMD3 747 aaKnown RBP13□□□□□ -0.33
SPTSSB-203ENST00000497374 POTEHQ6S545 545 aa13□□□□□ -0.33
SPTSSB-203ENST00000497374 SAMD1Q6SPF0 538 aaPredicted RBP12.95□□□□□ -0.34
SPTSSB-203ENST00000497374 MYCNP04198 464 aaPredicted RBP12.83□□□□□ -0.36
SPTSSB-203ENST00000497374 POLA2Q14181 598 aa12.69□□□□□ -0.38
SPTSSB-203ENST00000497374 RBM42Q9BTD8 480 aaKnown RBP12.66□□□□□ -0.38
SPTSSB-203ENST00000497374 SLC4A1APQ9BWU0 796 aaKnown RBP12.66□□□□□ -0.38
SPTSSB-203ENST00000497374 FOXD4L1Q9NU39 408 aa12.62□□□□□ -0.39
SPTSSB-203ENST00000497374 ATF5Q9Y2D1 282 aaPredicted RBP12.62□□□□□ -0.39
SPTSSB-203ENST00000497374 CHRDL2Q6WN34 429 aa12.49□□□□□ -0.41
SPTSSB-203ENST00000497374 ZBTB22O15209 634 aa12.47□□□□□ -0.41
SPTSSB-203ENST00000497374 ZBTB12Q9Y330 459 aaPredicted RBP12.38□□□□□ -0.43
SPTSSB-203ENST00000497374 AKT1S1Q96B36 256 aa12.36□□□□□ -0.43
SPTSSB-203ENST00000497374 OSCARQ8IYS5 282 aa12.35□□□□□ -0.43
SPTSSB-203ENST00000497374 REM2Q8IYK8 340 aaPredicted RBP12.27□□□□□ -0.45
SPTSSB-203ENST00000497374 ATXN8OSP0DMR3 200 aa12.22□□□□□ -0.45
SPTSSB-203ENST00000497374 PIP4P2Q8N4L2 257 aa12.18□□□□□ -0.46
SPTSSB-203ENST00000497374 PITPNM1O00562 1244 aa12.17□□□□□ -0.46
SPTSSB-203ENST00000497374 SP7Q8TDD2 431 aaPredicted RBP12.11□□□□□ -0.47
SPTSSB-203ENST00000497374 FXR2P51116 673 aaKnown RBP eCLIP12.09□□□□□ -0.47
SPTSSB-203ENST00000497374 SPDYE2BA6NHP3 402 aa12.03□□□□□ -0.48
SPTSSB-203ENST00000497374 SPDYE6P0CI01 402 aa12.03□□□□□ -0.48
SPTSSB-203ENST00000497374 MKRN4PQ13434 485 aaPredicted RBP12.03□□□□□ -0.48
SPTSSB-203ENST00000497374 SPDYE2Q495Y8 402 aa12.03□□□□□ -0.48
SPTSSB-203ENST00000497374 FBLN2P98095 1184 aa12□□□□□ -0.49
SPTSSB-203ENST00000497374 HAX1O00165 279 aa11.93□□□□□ -0.5
SPTSSB-203ENST00000497374 SSUH2Q9Y2M2 353 aa11.91□□□□□ -0.5
SPTSSB-203ENST00000497374 EVX2Q03828 476 aa11.88□□□□□ -0.51
SPTSSB-203ENST00000497374 SPDYE1Q8NFV5 336 aaPredicted RBP11.83□□□□□ -0.52
SPTSSB-203ENST00000497374 ZNF692Q9BU19 519 aaPredicted RBP11.83□□□□□ -0.52
SPTSSB-203ENST00000497374 PRKAR2AP13861 404 aaKnown RBP11.81□□□□□ -0.52
SPTSSB-203ENST00000497374 CLEC11AQ9Y240 323 aa11.81□□□□□ -0.52
SPTSSB-203ENST00000497374 C19orf67A6NJJ6 358 aa11.71□□□□□ -0.53
SPTSSB-203ENST00000497374 CSRNP3Q8WYN3 585 aa11.7□□□□□ -0.54
SPTSSB-203ENST00000497374 PABPN1Q86U42 306 aaKnown RBP eCLIP11.68□□□□□ -0.54
SPTSSB-203ENST00000497374 CHADLQ6NUI6 762 aa11.67□□□□□ -0.54
SPTSSB-203ENST00000497374 PRR29P0C7W0 189 aa11.59□□□□□ -0.55
SPTSSB-203ENST00000497374 GABBR2O75899 941 aa11.56□□□□□ -0.56
SPTSSB-203ENST00000497374 FARP1Q9Y4F1 1045 aaPredicted RBP11.46□□□□□ -0.57
SPTSSB-203ENST00000497374 CD44P16070 742 aaKnown RBP11.42□□□□□ -0.58
SPTSSB-203ENST00000497374 EHMT2Q96KQ7 1210 aa11.41□□□□□ -0.58
SPTSSB-203ENST00000497374 POTEIP0CG38 1075 aa11.37□□□□□ -0.59
SPTSSB-203ENST00000497374 CREBZFQ9NS37 354 aa11.35□□□□□ -0.59
SPTSSB-203ENST00000497374 LHX8Q68G74 356 aa11.33□□□□□ -0.6
SPTSSB-203ENST00000497374 SPDYE4A6NLX3 237 aa11.29□□□□□ -0.6
SPTSSB-203ENST00000497374 ZNF579Q8NAF0 562 aaKnown RBP11.27□□□□□ -0.61
SPTSSB-203ENST00000497374 STAG3Q9UJ98 1225 aa11.27□□□□□ -0.61
SPTSSB-203ENST00000497374 NISCHQ9Y2I1 1504 aa11.26□□□□□ -0.61
SPTSSB-203ENST00000497374 CLCN6P51797 869 aa11.24□□□□□ -0.61
SPTSSB-203ENST00000497374 ZRANB1Q9UGI0 708 aa11.22□□□□□ -0.61
SPTSSB-203ENST00000497374 MNX1P50219 401 aaPredicted RBP11.18□□□□□ -0.62
SPTSSB-203ENST00000497374 GALR2O43603 387 aaPredicted RBP11.16□□□□□ -0.62
SPTSSB-203ENST00000497374 DCBLD2Q96PD2 775 aa11.14□□□□□ -0.63
SPTSSB-203ENST00000497374 PHF12Q96QT6 1004 aa11.1□□□□□ -0.63
SPTSSB-203ENST00000497374 PROM2Q8N271 834 aa11.09□□□□□ -0.63
SPTSSB-203ENST00000497374 PAK3O75914 559 aaPredicted RBP11.03□□□□□ -0.64
SPTSSB-203ENST00000497374 NPM1P06748 294 aaKnown RBP eCLIP11.03□□□□□ -0.64
SPTSSB-203ENST00000497374 POTEB2H3BUK9 544 aa10.99□□□□□ -0.65
SPTSSB-203ENST00000497374 PELP1Q8IZL8 1130 aaKnown RBP10.97□□□□□ -0.65
SPTSSB-203ENST00000497374 MS4A3Q96HJ5 214 aa10.96□□□□□ -0.65
SPTSSB-203ENST00000497374 OTUD5Q96G74 571 aa10.95□□□□□ -0.66
SPTSSB-203ENST00000497374 ASTLQ6HA08 431 aaPredicted RBP10.91□□□□□ -0.66
SPTSSB-203ENST00000497374 CCDC61Q9Y6R9 512 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms