RNA–Protein interactions for RNA: ENST00000496969.1

SF1-219, Transcript of splicing factor 1, humanhuman

TSL 3

Gene SF1, Length 455 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-219ENST00000496969 LRRC7Q96NW7 1537 aa12.65□□□□□ -0.38
SF1-219ENST00000496969 SCAF1Q9H7N4 1312 aaKnown RBP12.64□□□□□ -0.39
SF1-219ENST00000496969 ZFYVE9O95405 1425 aa12.64□□□□□ -0.39
SF1-219ENST00000496969 TOM1O60784 492 aa12.64□□□□□ -0.39
SF1-219ENST00000496969 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.64□□□□□ -0.39
SF1-219ENST00000496969 TRIM52Q96A61 297 aa12.64□□□□□ -0.39
SF1-219ENST00000496969 PLEKHG1Q9ULL1 1385 aa12.64□□□□□ -0.39
SF1-219ENST00000496969 KIF1BO60333 1816 aa12.64□□□□□ -0.39
SF1-219ENST00000496969 DIP2AQ14689 1571 aa12.64□□□□□ -0.39
SF1-219ENST00000496969 NWD1Q149M9 1564 aa12.64□□□□□ -0.39
SF1-219ENST00000496969 CLTCL1P53675 1640 aa12.62□□□□□ -0.39
SF1-219ENST00000496969 NKTRP30414 1462 aaKnown RBP12.62□□□□□ -0.39
SF1-219ENST00000496969 XIRP1Q702N8 1843 aaKnown RBP12.6□□□□□ -0.39
SF1-219ENST00000496969 PIP4K2BP78356 416 aa12.6□□□□□ -0.39
SF1-219ENST00000496969 SLC26A8Q96RN1 970 aa12.6□□□□□ -0.39
SF1-219ENST00000496969 ZNF326Q5BKZ1 582 aaKnown RBP12.59□□□□□ -0.39
SF1-219ENST00000496969 SLC4A1APQ9BWU0 796 aaKnown RBP12.59□□□□□ -0.39
SF1-219ENST00000496969 CHD2O14647 1828 aaKnown RBP12.58□□□□□ -0.4
SF1-219ENST00000496969 KCNA6P17658 529 aa12.58□□□□□ -0.4
SF1-219ENST00000496969 SENP3Q9H4L4 574 aaPredicted RBP12.58□□□□□ -0.4
SF1-219ENST00000496969 ACIN1Q9UKV3 1341 aaKnown RBP12.58□□□□□ -0.4
SF1-219ENST00000496969 NUTM2DQ5VT03 806 aaPredicted RBP12.56□□□□□ -0.4
SF1-219ENST00000496969 NEXMIFQ5QGS0 1516 aa12.56□□□□□ -0.4
SF1-219ENST00000496969 SETBP1Q9Y6X0 1596 aa12.56□□□□□ -0.4
SF1-219ENST00000496969 TMEM94Q12767 1356 aa12.56□□□□□ -0.4
SF1-219ENST00000496969 ALKQ9UM73 1620 aa12.55□□□□□ -0.4
SF1-219ENST00000496969 PROSER2Q86WR7 435 aaPredicted RBP12.55□□□□□ -0.4
SF1-219ENST00000496969 PIK3R4Q99570 1358 aa12.55□□□□□ -0.4
SF1-219ENST00000496969 ADAMTS13Q76LX8 1427 aa12.54□□□□□ -0.4
SF1-219ENST00000496969 TBX22Q9Y458 520 aa12.54□□□□□ -0.4
SF1-219ENST00000496969 NRXN3Q9Y4C0 1643 aa12.54□□□□□ -0.4
SF1-219ENST00000496969 MSH6P52701 1360 aa12.54□□□□□ -0.4
SF1-219ENST00000496969 SETD5Q9C0A6 1442 aa12.54□□□□□ -0.4
SF1-219ENST00000496969 CCDC144AA2RUR9 1427 aa12.53□□□□□ -0.4
SF1-219ENST00000496969 PPLO60437 1756 aa12.51□□□□□ -0.41
SF1-219ENST00000496969 DISP3Q9P2K9 1392 aa12.51□□□□□ -0.41
SF1-219ENST00000496969 XRN1Q8IZH2 1706 aaKnown RBP12.51□□□□□ -0.41
SF1-219ENST00000496969 HSPA1LP34931 641 aa12.5□□□□□ -0.41
SF1-219ENST00000496969 C14orf37Q86TY3 774 aa12.5□□□□□ -0.41
SF1-219ENST00000496969 ROBO1Q9Y6N7 1651 aa12.49□□□□□ -0.41
SF1-219ENST00000496969 NCOA3Q9Y6Q9 1424 aa12.49□□□□□ -0.41
SF1-219ENST00000496969 MPHOSPH9Q99550 1183 aa12.49□□□□□ -0.41
SF1-219ENST00000496969 RAB3GAP2Q9H2M9 1393 aa12.48□□□□□ -0.41
SF1-219ENST00000496969 RPGRIP1LQ68CZ1 1315 aa12.48□□□□□ -0.41
SF1-219ENST00000496969 RBM33Q96EV2 1170 aaKnown RBP12.48□□□□□ -0.41
SF1-219ENST00000496969 IFT172Q9UG01 1749 aa12.48□□□□□ -0.41
SF1-219ENST00000496969 VGFO15240 615 aaPredicted RBP12.47□□□□□ -0.41
SF1-219ENST00000496969 FOXD1Q16676 465 aa12.47□□□□□ -0.41
SF1-219ENST00000496969 MED1Q15648 1581 aaPredicted RBP12.47□□□□□ -0.41
SF1-219ENST00000496969 SETD1AO15047 1707 aaKnown RBP12.46□□□□□ -0.41
SF1-219ENST00000496969 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.46□□□□□ -0.41
SF1-219ENST00000496969 AMOTL2Q9Y2J4 779 aa12.46□□□□□ -0.41
SF1-219ENST00000496969 FAM135BQ49AJ0 1406 aa12.45□□□□□ -0.42
SF1-219ENST00000496969 PTPRUQ92729 1446 aa12.45□□□□□ -0.42
SF1-219ENST00000496969 PHLPP1O60346 1717 aa12.44□□□□□ -0.42
SF1-219ENST00000496969 METP08581 1390 aa12.43□□□□□ -0.42
SF1-219ENST00000496969 ATF3P18847 181 aa12.43□□□□□ -0.42
SF1-219ENST00000496969 DCCP43146 1447 aa12.43□□□□□ -0.42
SF1-219ENST00000496969 NALCNQ8IZF0 1738 aa12.42□□□□□ -0.42
SF1-219ENST00000496969 CADPS2Q86UW7 1296 aa12.42□□□□□ -0.42
SF1-219ENST00000496969 SPATA31E1Q6ZUB1 1445 aa12.42□□□□□ -0.42
SF1-219ENST00000496969 ANKRD30BQ9BXX2 1392 aa12.42□□□□□ -0.42
SF1-219ENST00000496969 PTCH1Q13635 1447 aa12.41□□□□□ -0.42
SF1-219ENST00000496969 RGL3Q3MIN7 710 aa12.41□□□□□ -0.42
SF1-219ENST00000496969 C19orf44Q9H6X5 657 aa12.41□□□□□ -0.42
SF1-219ENST00000496969 LAMC1P11047 1609 aa12.4□□□□□ -0.42
SF1-219ENST00000496969 PHF23Q9BUL5 403 aaPredicted RBP12.4□□□□□ -0.42
SF1-219ENST00000496969 SLAIN2Q9P270 581 aa12.4□□□□□ -0.42
SF1-219ENST00000496969 ADGRL3Q9HAR2 1447 aa12.39□□□□□ -0.43
SF1-219ENST00000496969 KNDC1Q76NI1 1749 aa12.39□□□□□ -0.43
SF1-219ENST00000496969 PRAG1Q86YV5 1406 aa12.38□□□□□ -0.43
SF1-219ENST00000496969 MYOM2P54296 1465 aa12.38□□□□□ -0.43
SF1-219ENST00000496969 AHDC1Q5TGY3 1603 aaPredicted RBP12.37□□□□□ -0.43
SF1-219ENST00000496969 HRCP23327 699 aa12.37□□□□□ -0.43
SF1-219ENST00000496969 COL16A1Q07092 1604 aaPredicted RBP12.37□□□□□ -0.43
SF1-219ENST00000496969 PIK3C2GO75747 1445 aa12.37□□□□□ -0.43
SF1-219ENST00000496969 ADGRF5Q8IZF2 1346 aa12.37□□□□□ -0.43
SF1-219ENST00000496969 ASXL1Q8IXJ9 1541 aa12.36□□□□□ -0.43
SF1-219ENST00000496969 NHSL1Q5SYE7 1610 aa12.35□□□□□ -0.43
SF1-219ENST00000496969 MST1RQ04912 1400 aa12.35□□□□□ -0.43
SF1-219ENST00000496969 ROBO2Q9HCK4 1378 aa12.34□□□□□ -0.43
SF1-219ENST00000496969 CDC42BPGQ6DT37 1551 aa12.34□□□□□ -0.43
SF1-219ENST00000496969 JCADQ9P266 1359 aa12.33□□□□□ -0.44
SF1-219ENST00000496969 SHPRHQ149N8 1683 aa12.33□□□□□ -0.44
SF1-219ENST00000496969 NRXN1Q9ULB1 1477 aa12.33□□□□□ -0.44
SF1-219ENST00000496969 LRPPRCP42704 1394 aaKnown RBP12.32□□□□□ -0.44
SF1-219ENST00000496969 TECPR2O15040 1411 aa12.32□□□□□ -0.44
SF1-219ENST00000496969 ILDR2Q71H61 639 aa12.31□□□□□ -0.44
SF1-219ENST00000496969 BRINP3Q76B58 766 aa12.31□□□□□ -0.44
SF1-219ENST00000496969 YTHDC2Q9H6S0 1430 aaKnown RBP12.3□□□□□ -0.44
SF1-219ENST00000496969 STK26Q9P289 416 aa12.3□□□□□ -0.44
SF1-219ENST00000496969 DHX57Q6P158 1386 aaKnown RBP12.3□□□□□ -0.44
SF1-219ENST00000496969 C1orf167Q5SNV9 1468 aa12.29□□□□□ -0.44
SF1-219ENST00000496969 SPATA31A6Q5VVP1 1343 aa12.28□□□□□ -0.44
SF1-219ENST00000496969 ABCC11Q96J66 1382 aa12.28□□□□□ -0.44
SF1-219ENST00000496969 TMEM132EQ6IEE7 984 aa12.27□□□□□ -0.45
SF1-219ENST00000496969 C14orf93Q9H972 538 aaKnown RBP12.27□□□□□ -0.45
SF1-219ENST00000496969 FMN2Q9NZ56 1722 aa12.27□□□□□ -0.45
SF1-219ENST00000496969 KIF1AQ12756 1690 aa12.26□□□□□ -0.45
SF1-219ENST00000496969 CFAP70Q5T0N1 1121 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms