RNA–Protein interactions for RNA: ENST00000494841.1

RPGR-210, Transcript of retinitis pigmentosa GTPase regulator, humanhuman

TSL 1 (best)

Gene RPGR, Length 653 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGR-210ENST00000494841 KIAA0586Q9BVV6 1533 aa12.14□□□□□ -0.47
RPGR-210ENST00000494841 GOLGA3Q08378 1498 aa12.14□□□□□ -0.47
RPGR-210ENST00000494841 CTTNBP2Q8WZ74 1663 aa12.13□□□□□ -0.47
RPGR-210ENST00000494841 FCHSD2O94868 740 aa12.12□□□□□ -0.47
RPGR-210ENST00000494841 ZMYND10O75800 440 aa12.11□□□□□ -0.47
RPGR-210ENST00000494841 COL9A1P20849 921 aa12.11□□□□□ -0.47
RPGR-210ENST00000494841 PTPREP23469 700 aa12.11□□□□□ -0.47
RPGR-210ENST00000494841 POTEEQ6S8J3 1075 aa12.11□□□□□ -0.47
RPGR-210ENST00000494841 ZNF687Q8N1G0 1237 aa12.1□□□□□ -0.47
RPGR-210ENST00000494841 KCNK17Q96T54 332 aa12.1□□□□□ -0.47
RPGR-210ENST00000494841 IQGAP2Q13576 1575 aa12.09□□□□□ -0.47
RPGR-210ENST00000494841 ERCC6L2Q5T890 1561 aa12.09□□□□□ -0.47
RPGR-210ENST00000494841 HIC1Q14526 733 aa12.09□□□□□ -0.47
RPGR-210ENST00000494841 SHROOM2Q13796 1616 aa12.08□□□□□ -0.48
RPGR-210ENST00000494841 PPP1R3GB7ZBB8 358 aa12.08□□□□□ -0.48
RPGR-210ENST00000494841 PRG4Q92954 1404 aaPredicted RBP12.08□□□□□ -0.48
RPGR-210ENST00000494841 GNPATO15228 680 aa12.07□□□□□ -0.48
RPGR-210ENST00000494841 PBX2P40425 430 aa12.07□□□□□ -0.48
RPGR-210ENST00000494841 BARGINQ6ZT62 677 aa12.07□□□□□ -0.48
RPGR-210ENST00000494841 CERKQ8TCT0 537 aa12.07□□□□□ -0.48
RPGR-210ENST00000494841 TTBK1Q5TCY1 1321 aaPredicted RBP12.07□□□□□ -0.48
RPGR-210ENST00000494841 ARHGAP33O14559 1287 aa12.06□□□□□ -0.48
RPGR-210ENST00000494841 PSEN2P49810 448 aa12.06□□□□□ -0.48
RPGR-210ENST00000494841 AXIN2Q9Y2T1 843 aa12.06□□□□□ -0.48
RPGR-210ENST00000494841 RIMBP3CA6NJZ7 1639 aa12.06□□□□□ -0.48
RPGR-210ENST00000494841 RIMBP3BA6NNM3 1639 aa12.06□□□□□ -0.48
RPGR-210ENST00000494841 RIMBP3Q9UFD9 1639 aa12.06□□□□□ -0.48
RPGR-210ENST00000494841 ARHGEF11O15085 1522 aa12.06□□□□□ -0.48
RPGR-210ENST00000494841 FECHP22830 423 aa12.05□□□□□ -0.48
RPGR-210ENST00000494841 TNIKQ9UKE5 1360 aa12.04□□□□□ -0.48
RPGR-210ENST00000494841 UGGT2Q9NYU1 1516 aa12.03□□□□□ -0.48
RPGR-210ENST00000494841 KCNH8Q96L42 1107 aa12.03□□□□□ -0.48
RPGR-210ENST00000494841 DISP1Q96F81 1524 aa12.02□□□□□ -0.48
RPGR-210ENST00000494841 PRSS12P56730 875 aa12.02□□□□□ -0.49
RPGR-210ENST00000494841 DMRTA1Q5VZB9 504 aa12.02□□□□□ -0.49
RPGR-210ENST00000494841 CYB5RLQ6IPT4 315 aa12.02□□□□□ -0.49
RPGR-210ENST00000494841 RBM27Q9P2N5 1060 aaKnown RBP12.02□□□□□ -0.49
RPGR-210ENST00000494841 POTEGQ6S5H5 508 aa12.01□□□□□ -0.49
RPGR-210ENST00000494841 PADI6Q6TGC4 694 aa12.01□□□□□ -0.49
RPGR-210ENST00000494841 TTC13Q8NBP0 860 aa12.01□□□□□ -0.49
RPGR-210ENST00000494841 CDCA7LQ96GN5 454 aa12.01□□□□□ -0.49
RPGR-210ENST00000494841 CARMIL2Q6F5E8 1435 aa12.01□□□□□ -0.49
RPGR-210ENST00000494841 MAP2K5Q13163 448 aa12□□□□□ -0.49
RPGR-210ENST00000494841 ZBED2Q9BTP6 218 aa12□□□□□ -0.49
RPGR-210ENST00000494841 POTEMA6NI47 508 aa11.99□□□□□ -0.49
RPGR-210ENST00000494841 FAM198AQ9UFP1 575 aa11.99□□□□□ -0.49
RPGR-210ENST00000494841 KIAA0556O60303 1618 aa11.98□□□□□ -0.49
RPGR-210ENST00000494841 ARAP1Q96P48 1450 aa11.98□□□□□ -0.49
RPGR-210ENST00000494841 PROX2Q3B8N5 592 aa11.98□□□□□ -0.49
RPGR-210ENST00000494841 SLC24A3Q9HC58 644 aa11.98□□□□□ -0.49
RPGR-210ENST00000494841 TSKSQ9UJT2 592 aa11.97□□□□□ -0.49
RPGR-210ENST00000494841 SAMD9Q5K651 1589 aa11.96□□□□□ -0.49
RPGR-210ENST00000494841 PTPRGP23470 1445 aa11.96□□□□□ -0.49
RPGR-210ENST00000494841 MINK1Q8N4C8 1332 aaPredicted RBP11.96□□□□□ -0.49
RPGR-210ENST00000494841 TRIM6-TRIM34B2RNG4 842 aa11.96□□□□□ -0.49
RPGR-210ENST00000494841 KRI1Q8N9T8 703 aaKnown RBP11.96□□□□□ -0.49
RPGR-210ENST00000494841 SLC4A5Q9BY07 1137 aa11.96□□□□□ -0.49
RPGR-210ENST00000494841 ARHGAP35Q9NRY4 1499 aa11.95□□□□□ -0.5
RPGR-210ENST00000494841 FHOD3Q2V2M9 1422 aa11.95□□□□□ -0.5
RPGR-210ENST00000494841 IRF6O14896 467 aa11.95□□□□□ -0.5
RPGR-210ENST00000494841 LSM11P83369 360 aaKnown RBP eCLIP11.95□□□□□ -0.5
RPGR-210ENST00000494841 CCDC102AQ96A19 550 aa11.95□□□□□ -0.5
RPGR-210ENST00000494841 CLIP1P30622 1438 aa11.94□□□□□ -0.5
RPGR-210ENST00000494841 CEP162Q5TB80 1403 aa11.94□□□□□ -0.5
RPGR-210ENST00000494841 KRTAP3-3Q9BYR6 98 aa11.94□□□□□ -0.5
RPGR-210ENST00000494841 KRTAP3-2Q9BYR7 98 aa11.94□□□□□ -0.5
RPGR-210ENST00000494841 VPS9D1Q9Y2B5 631 aa11.93□□□□□ -0.5
RPGR-210ENST00000494841 ADGRG1Q9Y653 693 aa11.93□□□□□ -0.5
RPGR-210ENST00000494841 EFCAB5A4FU69 1503 aa11.92□□□□□ -0.5
RPGR-210ENST00000494841 C3orf80F5H4A9 247 aa11.92□□□□□ -0.5
RPGR-210ENST00000494841 ONECUT3O60422 494 aaPredicted RBP11.92□□□□□ -0.5
RPGR-210ENST00000494841 FAM161AQ3B820 660 aa11.92□□□□□ -0.5
RPGR-210ENST00000494841 AK7Q96M32 723 aa11.91□□□□□ -0.5
RPGR-210ENST00000494841 TK2O00142 265 aa11.9□□□□□ -0.5
RPGR-210ENST00000494841 PLB1Q6P1J6 1458 aa11.89□□□□□ -0.51
RPGR-210ENST00000494841 ARID3CA6NKF2 412 aa11.89□□□□□ -0.51
RPGR-210ENST00000494841 PACS2Q86VP3 889 aa11.89□□□□□ -0.51
RPGR-210ENST00000494841 KIAA1468Q9P260 1216 aa11.89□□□□□ -0.51
RPGR-210ENST00000494841 NBPF26B4DH59 902 aa11.88□□□□□ -0.51
RPGR-210ENST00000494841 ADGRD1Q6QNK2 874 aa11.88□□□□□ -0.51
RPGR-210ENST00000494841 CDAN1Q8IWY9 1227 aa11.88□□□□□ -0.51
RPGR-210ENST00000494841 RABGEF1Q9UJ41 708 aa11.88□□□□□ -0.51
RPGR-210ENST00000494841 ATP1B4Q9UN42 357 aaPredicted RBP11.88□□□□□ -0.51
RPGR-210ENST00000494841 UACAQ9BZF9 1416 aa11.87□□□□□ -0.51
RPGR-210ENST00000494841 METTL3Q86U44 580 aaKnown RBP11.87□□□□□ -0.51
RPGR-210ENST00000494841 ADCY10Q96PN6 1610 aa11.86□□□□□ -0.51
RPGR-210ENST00000494841 TRIM66O15016 1216 aa11.86□□□□□ -0.51
RPGR-210ENST00000494841 NUDT18Q6ZVK8 323 aa11.86□□□□□ -0.51
RPGR-210ENST00000494841 PXYLP1Q8TE99 480 aa11.86□□□□□ -0.51
RPGR-210ENST00000494841 TATDN2Q93075 761 aa11.86□□□□□ -0.51
RPGR-210ENST00000494841 PHOX2BQ99453 314 aa11.86□□□□□ -0.51
RPGR-210ENST00000494841 ABCA8O94911 1581 aa11.85□□□□□ -0.51
RPGR-210ENST00000494841 OATP04181 439 aa11.85□□□□□ -0.51
RPGR-210ENST00000494841 ANKRD13DQ6ZTN6 518 aa11.85□□□□□ -0.51
RPGR-210ENST00000494841 EYA1Q99502 592 aa11.85□□□□□ -0.51
RPGR-210ENST00000494841 PNMA3Q9UL41 463 aa11.85□□□□□ -0.51
RPGR-210ENST00000494841 SMAPO00193 183 aa11.84□□□□□ -0.51
RPGR-210ENST00000494841 RBM46Q8TBY0 533 aaKnown RBP11.84□□□□□ -0.51
RPGR-210ENST00000494841 FMN1Q68DA7 1419 aa11.84□□□□□ -0.51
RPGR-210ENST00000494841 RAPGEF6Q8TEU7 1601 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms