RNA–Protein interactions for RNA: ENST00000494016.1

CPSF7-213, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 2

Gene CPSF7, Length 656 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-213ENST00000494016 HCSTQ9UBK5 93 aa9.29□□□□□ -0.92
CPSF7-213ENST00000494016 ERICH3Q5RHP9 1530 aa9.29□□□□□ -0.92
CPSF7-213ENST00000494016 PBRM1Q86U86 1689 aa9.29□□□□□ -0.92
CPSF7-213ENST00000494016 IGF1RP08069 1367 aa9.28□□□□□ -0.92
CPSF7-213ENST00000494016 LMOD2Q6P5Q4 547 aa9.28□□□□□ -0.92
CPSF7-213ENST00000494016 KCNK17Q96T54 332 aa9.28□□□□□ -0.92
CPSF7-213ENST00000494016 CLIP1P30622 1438 aa9.28□□□□□ -0.92
CPSF7-213ENST00000494016 CDHR5Q9HBB8 845 aa9.27□□□□□ -0.93
CPSF7-213ENST00000494016 AXIN2Q9Y2T1 843 aa9.27□□□□□ -0.93
CPSF7-213ENST00000494016 NUTM2FA1L443 756 aa9.26□□□□□ -0.93
CPSF7-213ENST00000494016 PPP1R3GB7ZBB8 358 aa9.26□□□□□ -0.93
CPSF7-213ENST00000494016 PSEN2P49810 448 aa9.26□□□□□ -0.93
CPSF7-213ENST00000494016 KCNH8Q96L42 1107 aa9.26□□□□□ -0.93
CPSF7-213ENST00000494016 ABCA5Q8WWZ7 1642 aa9.26□□□□□ -0.93
CPSF7-213ENST00000494016 SNAPC4Q5SXM2 1469 aa9.26□□□□□ -0.93
CPSF7-213ENST00000494016 TDRD9Q8NDG6 1382 aaKnown RBP9.25□□□□□ -0.93
CPSF7-213ENST00000494016 COL9A1P20849 921 aa9.25□□□□□ -0.93
CPSF7-213ENST00000494016 ARHGEF11O15085 1522 aa9.25□□□□□ -0.93
CPSF7-213ENST00000494016 CERKQ8TCT0 537 aa9.24□□□□□ -0.93
CPSF7-213ENST00000494016 NPDC1Q9NQX5 325 aaPredicted RBP9.24□□□□□ -0.93
CPSF7-213ENST00000494016 PTGDRQ13258 359 aa9.23□□□□□ -0.93
CPSF7-213ENST00000494016 DMRTA1Q5VZB9 504 aa9.23□□□□□ -0.93
CPSF7-213ENST00000494016 GPIHBP1Q8IV16 184 aa9.23□□□□□ -0.93
CPSF7-213ENST00000494016 GPR37O15354 613 aa9.22□□□□□ -0.93
CPSF7-213ENST00000494016 SLC4A5Q9BY07 1137 aa9.22□□□□□ -0.93
CPSF7-213ENST00000494016 VPS8Q8N3P4 1428 aa9.22□□□□□ -0.93
CPSF7-213ENST00000494016 CLASP1Q7Z460 1538 aa9.21□□□□□ -0.93
CPSF7-213ENST00000494016 FCHSD2O94868 740 aa9.21□□□□□ -0.94
CPSF7-213ENST00000494016 RANGAP1P46060 587 aaPredicted RBP9.21□□□□□ -0.94
CPSF7-213ENST00000494016 ZBED2Q9BTP6 218 aa9.21□□□□□ -0.94
CPSF7-213ENST00000494016 ABCA10Q8WWZ4 1543 aa9.21□□□□□ -0.94
CPSF7-213ENST00000494016 CARMIL1Q5VZK9 1371 aa9.2□□□□□ -0.94
CPSF7-213ENST00000494016 GRIN2BQ13224 1484 aa9.2□□□□□ -0.94
CPSF7-213ENST00000494016 MAGI1Q96QZ7 1491 aaPredicted RBP9.2□□□□□ -0.94
CPSF7-213ENST00000494016 TK2O00142 265 aa9.19□□□□□ -0.94
CPSF7-213ENST00000494016 ZEB1P37275 1124 aaPredicted RBP9.19□□□□□ -0.94
CPSF7-213ENST00000494016 PRSS12P56730 875 aa9.19□□□□□ -0.94
CPSF7-213ENST00000494016 ARAP1Q96P48 1450 aa9.19□□□□□ -0.94
CPSF7-213ENST00000494016 ADAMTS12P58397 1594 aa9.19□□□□□ -0.94
CPSF7-213ENST00000494016 HIC1Q14526 733 aa9.18□□□□□ -0.94
CPSF7-213ENST00000494016 GAPVD1Q14C86 1478 aa9.18□□□□□ -0.94
CPSF7-213ENST00000494016 TTBK1Q5TCY1 1321 aaPredicted RBP9.18□□□□□ -0.94
CPSF7-213ENST00000494016 RBM27Q9P2N5 1060 aaKnown RBP9.18□□□□□ -0.94
CPSF7-213ENST00000494016 SYNJ2O15056 1496 aa9.17□□□□□ -0.94
CPSF7-213ENST00000494016 ONECUT3O60422 494 aaPredicted RBP9.17□□□□□ -0.94
CPSF7-213ENST00000494016 ZC3H15Q8WU90 426 aaKnown RBP9.17□□□□□ -0.94
CPSF7-213ENST00000494016 CDCA7LQ96GN5 454 aa9.17□□□□□ -0.94
CPSF7-213ENST00000494016 VPS9D1Q9Y2B5 631 aa9.17□□□□□ -0.94
CPSF7-213ENST00000494016 TRIM6-TRIM34B2RNG4 842 aa9.16□□□□□ -0.94
CPSF7-213ENST00000494016 GNPATO15228 680 aa9.16□□□□□ -0.94
CPSF7-213ENST00000494016 PROX2Q3B8N5 592 aa9.16□□□□□ -0.94
CPSF7-213ENST00000494016 ADGRD1Q6QNK2 874 aa9.16□□□□□ -0.94
CPSF7-213ENST00000494016 TTC13Q8NBP0 860 aa9.16□□□□□ -0.94
CPSF7-213ENST00000494016 PADI6Q6TGC4 694 aa9.15□□□□□ -0.94
CPSF7-213ENST00000494016 TSKSQ9UJT2 592 aa9.15□□□□□ -0.94
CPSF7-213ENST00000494016 ARHGAP35Q9NRY4 1499 aa9.15□□□□□ -0.95
CPSF7-213ENST00000494016 FAM198AQ9UFP1 575 aa9.14□□□□□ -0.95
CPSF7-213ENST00000494016 CEP170Q5SW79 1584 aa9.13□□□□□ -0.95
CPSF7-213ENST00000494016 ZMYND10O75800 440 aa9.13□□□□□ -0.95
CPSF7-213ENST00000494016 RABGEF1Q9UJ41 708 aa9.13□□□□□ -0.95
CPSF7-213ENST00000494016 HRO43593 1189 aa9.12□□□□□ -0.95
CPSF7-213ENST00000494016 FECHP22830 423 aa9.12□□□□□ -0.95
CPSF7-213ENST00000494016 GRIN2AQ12879 1464 aa9.11□□□□□ -0.95
CPSF7-213ENST00000494016 BHMG1C9JSJ3 638 aaPredicted RBP9.11□□□□□ -0.95
CPSF7-213ENST00000494016 KANK4Q5T7N3 995 aaPredicted RBP9.11□□□□□ -0.95
CPSF7-213ENST00000494016 BARGINQ6ZT62 677 aa9.11□□□□□ -0.95
CPSF7-213ENST00000494016 PACS2Q86VP3 889 aa9.11□□□□□ -0.95
CPSF7-213ENST00000494016 KIAA1468Q9P260 1216 aa9.11□□□□□ -0.95
CPSF7-213ENST00000494016 ERCC6L2Q5T890 1561 aa9.11□□□□□ -0.95
CPSF7-213ENST00000494016 PRKCSHP14314 528 aaPredicted RBP9.1□□□□□ -0.95
CPSF7-213ENST00000494016 IRX2Q9BZI1 471 aaPredicted RBP9.1□□□□□ -0.95
CPSF7-213ENST00000494016 KCTD12Q96CX2 325 aaKnown RBP9.09□□□□□ -0.95
CPSF7-213ENST00000494016 STAC3Q96MF2 364 aa9.09□□□□□ -0.95
CPSF7-213ENST00000494016 CUL7Q14999 1698 aa9.09□□□□□ -0.95
CPSF7-213ENST00000494016 C3orf80F5H4A9 247 aa9.08□□□□□ -0.96
CPSF7-213ENST00000494016 MAP2K5Q13163 448 aa9.08□□□□□ -0.96
CPSF7-213ENST00000494016 CHMP7Q8WUX9 453 aaPredicted RBP9.08□□□□□ -0.96
CPSF7-213ENST00000494016 TATDN2Q93075 761 aa9.08□□□□□ -0.96
CPSF7-213ENST00000494016 ARXQ96QS3 562 aa9.08□□□□□ -0.96
CPSF7-213ENST00000494016 ADGRG1Q9Y653 693 aa9.08□□□□□ -0.96
CPSF7-213ENST00000494016 MINK1Q8N4C8 1332 aaPredicted RBP9.07□□□□□ -0.96
CPSF7-213ENST00000494016 NUP160Q12769 1436 aa9.07□□□□□ -0.96
CPSF7-213ENST00000494016 SHROOM2Q13796 1616 aa9.07□□□□□ -0.96
CPSF7-213ENST00000494016 NBPF26B4DH59 902 aa9.07□□□□□ -0.96
CPSF7-213ENST00000494016 NBPF3Q9H094 633 aa9.07□□□□□ -0.96
CPSF7-213ENST00000494016 RGS20O76081 388 aa9.06□□□□□ -0.96
CPSF7-213ENST00000494016 NUDT18Q6ZVK8 323 aa9.06□□□□□ -0.96
CPSF7-213ENST00000494016 CCER1Q8TC90 406 aaPredicted RBP9.06□□□□□ -0.96
CPSF7-213ENST00000494016 PNMA3Q9UL41 463 aa9.06□□□□□ -0.96
CPSF7-213ENST00000494016 FHAD1B1AJZ9 1412 aa9.05□□□□□ -0.96
CPSF7-213ENST00000494016 IRF6O14896 467 aa9.05□□□□□ -0.96
CPSF7-213ENST00000494016 LAPTM4BQ86VI4 370 aa9.05□□□□□ -0.96
CPSF7-213ENST00000494016 EYA1Q99502 592 aa9.05□□□□□ -0.96
CPSF7-213ENST00000494016 OATP04181 439 aa9.04□□□□□ -0.96
CPSF7-213ENST00000494016 FAM161AQ3B820 660 aa9.04□□□□□ -0.96
CPSF7-213ENST00000494016 TPRNQ4KMQ1 711 aa9.04□□□□□ -0.96
CPSF7-213ENST00000494016 MRPL50Q8N5N7 158 aaKnown RBP9.04□□□□□ -0.96
CPSF7-213ENST00000494016 RBM46Q8TBY0 533 aaKnown RBP9.04□□□□□ -0.96
CPSF7-213ENST00000494016 SEPT9Q9UHD8 586 aaPredicted RBP9.04□□□□□ -0.96
CPSF7-213ENST00000494016 CTTNBP2Q8WZ74 1663 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms