RNA–Protein interactions for RNA: ENST00000490833.5

FN1-223, Transcript of fibronectin 1, humanhuman

TSL 3

Gene FN1, Length 699 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-223ENST00000490833 SPATA31E1Q6ZUB1 1445 aa8.67□□□□□ -1.02
FN1-223ENST00000490833 CCDC7Q96M83 1385 aa8.67□□□□□ -1.02
FN1-223ENST00000490833 ERBINQ96RT1 1412 aa8.67□□□□□ -1.02
FN1-223ENST00000490833 CDC42BPAQ5VT25 1732 aa8.66□□□□□ -1.02
FN1-223ENST00000490833 KDM5BQ9UGL1 1544 aa8.66□□□□□ -1.02
FN1-223ENST00000490833 KLHL34Q8N239 644 aa8.66□□□□□ -1.02
FN1-223ENST00000490833 PREX2Q70Z35 1606 aa8.65□□□□□ -1.02
FN1-223ENST00000490833 DUOX2Q9NRD8 1548 aa8.65□□□□□ -1.02
FN1-223ENST00000490833 ATP10AO60312 1499 aa8.65□□□□□ -1.02
FN1-223ENST00000490833 CCDC144AA2RUR9 1427 aa8.65□□□□□ -1.02
FN1-223ENST00000490833 PLCG2P16885 1265 aa8.65□□□□□ -1.02
FN1-223ENST00000490833 HNRNPMP52272 730 aaKnown RBP eCLIP8.65□□□□□ -1.02
FN1-223ENST00000490833 CDCA8Q53HL2 280 aa8.65□□□□□ -1.02
FN1-223ENST00000490833 ARHGAP5Q13017 1502 aa8.64□□□□□ -1.03
FN1-223ENST00000490833 WDR7Q9Y4E6 1490 aa8.64□□□□□ -1.03
FN1-223ENST00000490833 RALBP1Q15311 655 aa8.64□□□□□ -1.03
FN1-223ENST00000490833 MARVELD3Q96A59 401 aa8.64□□□□□ -1.03
FN1-223ENST00000490833 PRKRIP1Q9H875 184 aaPredicted RBP8.64□□□□□ -1.03
FN1-223ENST00000490833 PLXNC1O60486 1568 aa8.64□□□□□ -1.03
FN1-223ENST00000490833 KANK1Q14678 1352 aa8.63□□□□□ -1.03
FN1-223ENST00000490833 CARD11Q9BXL7 1154 aa8.63□□□□□ -1.03
FN1-223ENST00000490833 RALGAPBQ86X10 1494 aa8.63□□□□□ -1.03
FN1-223ENST00000490833 USP47Q96K76 1375 aa8.62□□□□□ -1.03
FN1-223ENST00000490833 KDM6BO15054 1643 aa8.62□□□□□ -1.03
FN1-223ENST00000490833 SUPT16HQ9Y5B9 1047 aaKnown RBP8.62□□□□□ -1.03
FN1-223ENST00000490833 CHD1O14646 1710 aa8.61□□□□□ -1.03
FN1-223ENST00000490833 NBPF8Q3BBV2 869 aa8.61□□□□□ -1.03
FN1-223ENST00000490833 POLR1AO95602 1720 aaPredicted RBP8.6□□□□□ -1.03
FN1-223ENST00000490833 MYO5CQ9NQX4 1742 aa8.6□□□□□ -1.03
FN1-223ENST00000490833 CLASP1Q7Z460 1538 aa8.6□□□□□ -1.03
FN1-223ENST00000490833 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP8.6□□□□□ -1.03
FN1-223ENST00000490833 FAM135AQ9P2D6 1515 aa8.6□□□□□ -1.03
FN1-223ENST00000490833 SPAG9O60271 1321 aaKnown RBP8.6□□□□□ -1.03
FN1-223ENST00000490833 SNPHO15079 494 aa8.6□□□□□ -1.03
FN1-223ENST00000490833 INSRP06213 1382 aa8.6□□□□□ -1.03
FN1-223ENST00000490833 KIF7Q2M1P5 1343 aa8.59□□□□□ -1.03
FN1-223ENST00000490833 ZBED9Q6R2W3 1325 aa8.59□□□□□ -1.03
FN1-223ENST00000490833 VASPP50552 380 aaPredicted RBP8.59□□□□□ -1.03
FN1-223ENST00000490833 DCAF11Q8TEB1 546 aa8.59□□□□□ -1.03
FN1-223ENST00000490833 HIRIP3Q9BW71 556 aaPredicted RBP8.59□□□□□ -1.03
FN1-223ENST00000490833 MRS2Q9HD23 443 aa8.59□□□□□ -1.03
FN1-223ENST00000490833 PCDHB8Q9UN66 801 aa8.59□□□□□ -1.03
FN1-223ENST00000490833 SAMD9LQ8IVG5 1584 aa8.59□□□□□ -1.03
FN1-223ENST00000490833 EIF2AK4Q9P2K8 1649 aaKnown RBP8.58□□□□□ -1.04
FN1-223ENST00000490833 CDC42BPBQ9Y5S2 1711 aa8.58□□□□□ -1.04
FN1-223ENST00000490833 UNC13BO14795 1591 aa8.58□□□□□ -1.04
FN1-223ENST00000490833 HNRNPUQ00839 825 aaKnown RBP eCLIP8.58□□□□□ -1.04
FN1-223ENST00000490833 KCNH8Q96L42 1107 aa8.58□□□□□ -1.04
FN1-223ENST00000490833 GPRASP1Q5JY77 1395 aa8.58□□□□□ -1.04
FN1-223ENST00000490833 TMF1P82094 1093 aa8.57□□□□□ -1.04
FN1-223ENST00000490833 KRTAP3-3Q9BYR6 98 aa8.57□□□□□ -1.04
FN1-223ENST00000490833 KRTAP3-2Q9BYR7 98 aa8.57□□□□□ -1.04
FN1-223ENST00000490833 MAGI2Q86UL8 1455 aa8.57□□□□□ -1.04
FN1-223ENST00000490833 NEURL4Q96JN8 1562 aa8.56□□□□□ -1.04
FN1-223ENST00000490833 LAMC1P11047 1609 aa8.56□□□□□ -1.04
FN1-223ENST00000490833 IQGAP3Q86VI3 1631 aa8.56□□□□□ -1.04
FN1-223ENST00000490833 PDE3BQ13370 1112 aa8.56□□□□□ -1.04
FN1-223ENST00000490833 GSE1Q14687 1217 aa8.56□□□□□ -1.04
FN1-223ENST00000490833 TMC1Q8TDI8 760 aa8.56□□□□□ -1.04
FN1-223ENST00000490833 BRD4O60885 1362 aaPredicted RBP8.56□□□□□ -1.04
FN1-223ENST00000490833 SYCP2Q9BX26 1530 aa8.55□□□□□ -1.04
FN1-223ENST00000490833 GOLGA2Q08379 1002 aa8.55□□□□□ -1.04
FN1-223ENST00000490833 EIF3AQ14152 1382 aaKnown RBP8.55□□□□□ -1.04
FN1-223ENST00000490833 IRX5P78411 483 aaPredicted RBP8.54□□□□□ -1.04
FN1-223ENST00000490833 ZNF326Q5BKZ1 582 aaKnown RBP8.54□□□□□ -1.04
FN1-223ENST00000490833 NGEFQ8N5V2 710 aa8.54□□□□□ -1.04
FN1-223ENST00000490833 ZCCHC11Q5TAX3 1644 aaKnown RBP8.54□□□□□ -1.04
FN1-223ENST00000490833 ZMYM4Q5VZL5 1548 aa8.54□□□□□ -1.04
FN1-223ENST00000490833 PRAG1Q86YV5 1406 aa8.54□□□□□ -1.04
FN1-223ENST00000490833 MYBBP1AQ9BQG0 1328 aaKnown RBP8.54□□□□□ -1.04
FN1-223ENST00000490833 KDM5CP41229 1560 aa8.53□□□□□ -1.04
FN1-223ENST00000490833 DHX29Q7Z478 1369 aaKnown RBP8.53□□□□□ -1.04
FN1-223ENST00000490833 OCEL1Q9H607 264 aa8.53□□□□□ -1.04
FN1-223ENST00000490833 ABCC1P33527 1531 aa8.53□□□□□ -1.04
FN1-223ENST00000490833 TTC37Q6PGP7 1564 aa8.52□□□□□ -1.04
FN1-223ENST00000490833 ST20-MTHFSA0A0A6YYL1 179 aa8.52□□□□□ -1.05
FN1-223ENST00000490833 ZNF467Q7Z7K2 595 aaPredicted RBP8.52□□□□□ -1.05
FN1-223ENST00000490833 NLRP13Q86W25 1043 aa8.52□□□□□ -1.05
FN1-223ENST00000490833 KDM2AQ9Y2K7 1162 aa8.52□□□□□ -1.05
FN1-223ENST00000490833 PRDM15P57071 1507 aaPredicted RBP8.52□□□□□ -1.05
FN1-223ENST00000490833 PTPRTO14522 1441 aa8.52□□□□□ -1.05
FN1-223ENST00000490833 SCAPERQ9BY12 1400 aa8.52□□□□□ -1.05
FN1-223ENST00000490833 CFAP74Q9C0B2 1584 aa8.52□□□□□ -1.05
FN1-223ENST00000490833 RPGRIP1LQ68CZ1 1315 aa8.52□□□□□ -1.05
FN1-223ENST00000490833 FANCAO15360 1455 aa8.51□□□□□ -1.05
FN1-223ENST00000490833 POTEB3A0JP26 581 aa8.51□□□□□ -1.05
FN1-223ENST00000490833 C11orf95C9JLR9 678 aaPredicted RBP8.51□□□□□ -1.05
FN1-223ENST00000490833 POTEBQ6S5H4 581 aa8.51□□□□□ -1.05
FN1-223ENST00000490833 PPP4R2Q9NY27 417 aa8.51□□□□□ -1.05
FN1-223ENST00000490833 EMP3P54852 163 aa8.5□□□□□ -1.05
FN1-223ENST00000490833 MKRN3Q13064 507 aaKnown RBP8.5□□□□□ -1.05
FN1-223ENST00000490833 FAM9BQ8IZU0 186 aa8.5□□□□□ -1.05
FN1-223ENST00000490833 ABCA9Q8IUA7 1624 aa8.5□□□□□ -1.05
FN1-223ENST00000490833 ZNF518AQ6AHZ1 1483 aa8.5□□□□□ -1.05
FN1-223ENST00000490833 PUS7Q96PZ0 661 aaKnown RBP8.49□□□□□ -1.05
FN1-223ENST00000490833 HS3ST6Q96QI5 342 aa8.49□□□□□ -1.05
FN1-223ENST00000490833 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.49□□□□□ -1.05
FN1-223ENST00000490833 MYT1LQ9UL68 1186 aa8.49□□□□□ -1.05
FN1-223ENST00000490833 RGL3Q3MIN7 710 aa8.48□□□□□ -1.05
FN1-223ENST00000490833 PNISRQ8TF01 805 aaKnown RBP8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms