RNA–Protein interactions for RNA: ENST00000483338.1

COL4A5-205, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL4A5, Length 3,622 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-205ENST00000483338 HDAC5Q9UQL6 1122 aa9.84□□□□□ -0.83
COL4A5-205ENST00000483338 ZBTB9Q96C00 473 aa9.84□□□□□ -0.83
COL4A5-205ENST00000483338 CDCA7LQ96GN5 454 aa9.84□□□□□ -0.83
COL4A5-205ENST00000483338 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.83□□□□□ -0.84
COL4A5-205ENST00000483338 CHMP5Q9NZZ3 219 aa9.83□□□□□ -0.84
COL4A5-205ENST00000483338 SPDYE4A6NLX3 237 aa9.83□□□□□ -0.84
COL4A5-205ENST00000483338 MYCNP04198 464 aaPredicted RBP9.83□□□□□ -0.84
COL4A5-205ENST00000483338 CSPP1Q1MSJ5 1256 aa9.83□□□□□ -0.84
COL4A5-205ENST00000483338 HS1BP3Q53T59 392 aa9.83□□□□□ -0.84
COL4A5-205ENST00000483338 CYB5RLQ6IPT4 315 aa9.82□□□□□ -0.84
COL4A5-205ENST00000483338 CARMIL2Q6F5E8 1435 aa9.82□□□□□ -0.84
COL4A5-205ENST00000483338 NPM1P06748 294 aaKnown RBP eCLIP9.82□□□□□ -0.84
COL4A5-205ENST00000483338 ZNF771Q7L3S4 317 aaPredicted RBP9.82□□□□□ -0.84
COL4A5-205ENST00000483338 MYRIPQ8NFW9 859 aa9.82□□□□□ -0.84
COL4A5-205ENST00000483338 FHOD3Q2V2M9 1422 aa9.82□□□□□ -0.84
COL4A5-205ENST00000483338 WWC1Q8IX03 1113 aa9.81□□□□□ -0.84
COL4A5-205ENST00000483338 CUL7Q14999 1698 aa9.81□□□□□ -0.84
COL4A5-205ENST00000483338 PDE3BQ13370 1112 aa9.81□□□□□ -0.84
COL4A5-205ENST00000483338 CAPN2P17655 700 aa9.8□□□□□ -0.84
COL4A5-205ENST00000483338 CHIC2Q9UKJ5 165 aa9.8□□□□□ -0.84
COL4A5-205ENST00000483338 ZKSCAN5Q9Y2L8 839 aa9.8□□□□□ -0.84
COL4A5-205ENST00000483338 TBC1D32Q96NH3 1257 aa9.8□□□□□ -0.84
COL4A5-205ENST00000483338 KIAA0586Q9BVV6 1533 aa9.8□□□□□ -0.84
COL4A5-205ENST00000483338 PBRM1Q86U86 1689 aa9.79□□□□□ -0.84
COL4A5-205ENST00000483338 PRG4Q92954 1404 aaPredicted RBP9.79□□□□□ -0.84
COL4A5-205ENST00000483338 NBPF1Q3BBV0 1214 aa9.79□□□□□ -0.84
COL4A5-205ENST00000483338 UACAQ9BZF9 1416 aa9.79□□□□□ -0.84
COL4A5-205ENST00000483338 ADAMTS12P58397 1594 aa9.79□□□□□ -0.84
COL4A5-205ENST00000483338 CLGNO14967 610 aa9.78□□□□□ -0.84
COL4A5-205ENST00000483338 ZNF692Q9BU19 519 aaPredicted RBP9.78□□□□□ -0.84
COL4A5-205ENST00000483338 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.78□□□□□ -0.84
COL4A5-205ENST00000483338 TRIM6-TRIM34B2RNG4 842 aa9.78□□□□□ -0.84
COL4A5-205ENST00000483338 TRIM34Q9BYJ4 488 aa9.78□□□□□ -0.84
COL4A5-205ENST00000483338 CCDC18Q5T9S5 1454 aa9.78□□□□□ -0.84
COL4A5-205ENST00000483338 PDLIM2Q96JY6 352 aa9.78□□□□□ -0.84
COL4A5-205ENST00000483338 PTPRGP23470 1445 aa9.77□□□□□ -0.85
COL4A5-205ENST00000483338 FAM177BA6PVY3 158 aa9.77□□□□□ -0.85
COL4A5-205ENST00000483338 TULP2O00295 520 aa9.77□□□□□ -0.85
COL4A5-205ENST00000483338 CNKSR2Q8WXI2 1034 aa9.77□□□□□ -0.85
COL4A5-205ENST00000483338 TIAM1Q13009 1591 aa9.77□□□□□ -0.85
COL4A5-205ENST00000483338 SPATA31E1Q6ZUB1 1445 aa9.77□□□□□ -0.85
COL4A5-205ENST00000483338 APPP05067 770 aa9.76□□□□□ -0.85
COL4A5-205ENST00000483338 GTF2F1P35269 517 aaKnown RBP eCLIP9.76□□□□□ -0.85
COL4A5-205ENST00000483338 HOMEZQ8IX15 550 aa9.76□□□□□ -0.85
COL4A5-205ENST00000483338 PRR29P0C7W0 189 aa9.76□□□□□ -0.85
COL4A5-205ENST00000483338 U2AF2P26368 475 aaKnown RBP eCLIP9.76□□□□□ -0.852e-9■■■■□ 19.8
COL4A5-205ENST00000483338 MCM5P33992 734 aa9.76□□□□□ -0.85
COL4A5-205ENST00000483338 GEMIN8Q9NWZ8 242 aaKnown RBP9.76□□□□□ -0.85
COL4A5-205ENST00000483338 SKOR2Q2VWA4 1001 aaPredicted RBP9.75□□□□□ -0.85
COL4A5-205ENST00000483338 TNPO1Q92973 898 aaKnown RBP9.75□□□□□ -0.85
COL4A5-205ENST00000483338 TIGD1Q96MW7 591 aa9.75□□□□□ -0.85
COL4A5-205ENST00000483338 YY1AP1Q9H869 796 aa9.75□□□□□ -0.85
COL4A5-205ENST00000483338 DDIT3P35638 169 aa9.74□□□□□ -0.85
COL4A5-205ENST00000483338 MLECQ14165 292 aa9.74□□□□□ -0.85
COL4A5-205ENST00000483338 PDCL2Q8N4E4 241 aa9.74□□□□□ -0.85
COL4A5-205ENST00000483338 PLEKHD1A6NEE1 506 aa9.74□□□□□ -0.85
COL4A5-205ENST00000483338 SLFN14P0C7P3 912 aa9.74□□□□□ -0.85
COL4A5-205ENST00000483338 FAM193AP78312 1265 aa9.74□□□□□ -0.85
COL4A5-205ENST00000483338 ZBTB7CA1YPR0 619 aa9.73□□□□□ -0.85
COL4A5-205ENST00000483338 TULP1O00294 542 aaPredicted RBP9.73□□□□□ -0.85
COL4A5-205ENST00000483338 BCL2L12Q9HB09 334 aa9.73□□□□□ -0.85
COL4A5-205ENST00000483338 LRRC9Q6ZRR7 1453 aa9.73□□□□□ -0.85
COL4A5-205ENST00000483338 IQGAP2Q13576 1575 aa9.73□□□□□ -0.85
COL4A5-205ENST00000483338 NUP160Q12769 1436 aa9.73□□□□□ -0.85
COL4A5-205ENST00000483338 ARHGAP35Q9NRY4 1499 aa9.73□□□□□ -0.85
COL4A5-205ENST00000483338 UPF2Q9HAU5 1272 aaKnown RBP9.73□□□□□ -0.85
COL4A5-205ENST00000483338 BRD4O60885 1362 aaPredicted RBP9.73□□□□□ -0.85
COL4A5-205ENST00000483338 IBTKQ9P2D0 1353 aaPredicted RBP9.73□□□□□ -0.85
COL4A5-205ENST00000483338 CCDC66A2RUB6 948 aa9.73□□□□□ -0.85
COL4A5-205ENST00000483338 PRIMPOLQ96LW4 560 aa9.73□□□□□ -0.85
COL4A5-205ENST00000483338 HMGN5P82970 282 aaKnown RBP9.72□□□□□ -0.85
COL4A5-205ENST00000483338 LOC102724159A0A0B4J2E5 919 aa9.72□□□□□ -0.85
COL4A5-205ENST00000483338 IGHDP01880 384 aa9.72□□□□□ -0.85
COL4A5-205ENST00000483338 GABPB1Q06547 395 aaPredicted RBP9.72□□□□□ -0.85
COL4A5-205ENST00000483338 PWP2Q15269 919 aaKnown RBP9.72□□□□□ -0.85
COL4A5-205ENST00000483338 ZNF622Q969S3 477 aaKnown RBP eCLIP9.72□□□□□ -0.85
COL4A5-205ENST00000483338 FMN1Q68DA7 1419 aa9.71□□□□□ -0.85
COL4A5-205ENST00000483338 L3MBTL2Q969R5 705 aa9.71□□□□□ -0.85
COL4A5-205ENST00000483338 KIF3AQ9Y496 699 aa9.71□□□□□ -0.85
COL4A5-205ENST00000483338 RBM25P49756 843 aaKnown RBP9.71□□□□□ -0.85
COL4A5-205ENST00000483338 RALBP1Q15311 655 aa9.71□□□□□ -0.85
COL4A5-205ENST00000483338 NBPF8Q3BBV2 869 aa9.71□□□□□ -0.85
COL4A5-205ENST00000483338 MTUS2Q5JR59 1369 aa9.71□□□□□ -0.86
COL4A5-205ENST00000483338 HSP90AB1P08238 724 aaKnown RBP9.71□□□□□ -0.86
COL4A5-205ENST00000483338 AXDND1Q5T1B0 1012 aaPredicted RBP9.71□□□□□ -0.86
COL4A5-205ENST00000483338 TMED8Q6PL24 325 aaPredicted RBP9.71□□□□□ -0.86
COL4A5-205ENST00000483338 NCOA3Q9Y6Q9 1424 aa9.71□□□□□ -0.86
COL4A5-205ENST00000483338 EP400NLQ6ZTU2 488 aa9.7□□□□□ -0.86
COL4A5-205ENST00000483338 GBP4Q96PP9 640 aa9.7□□□□□ -0.86
COL4A5-205ENST00000483338 RBSNQ9H1K0 784 aa9.7□□□□□ -0.86
COL4A5-205ENST00000483338 RRP7BPQ9NSQ0 103 aa9.7□□□□□ -0.86
COL4A5-205ENST00000483338 PATL2C9JE40 543 aaKnown RBP9.7□□□□□ -0.86
COL4A5-205ENST00000483338 PTPN23Q9H3S7 1636 aa9.7□□□□□ -0.86
COL4A5-205ENST00000483338 MAPK8IP3Q9UPT6 1336 aa9.7□□□□□ -0.86
COL4A5-205ENST00000483338 RTEL1-TNFRSF6BF6WH68 1400 aa9.7□□□□□ -0.86
COL4A5-205ENST00000483338 CEP170Q5SW79 1584 aa9.7□□□□□ -0.86
COL4A5-205ENST00000483338 HSP90B1P14625 803 aaKnown RBP9.7□□□□□ -0.86
COL4A5-205ENST00000483338 ZNF777Q9ULD5 760 aaPredicted RBP9.7□□□□□ -0.86
COL4A5-205ENST00000483338 FEZ1Q99689 392 aa9.69□□□□□ -0.86
COL4A5-205ENST00000483338 OGFRQ9NZT2 677 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms