RNA–Protein interactions for RNA: ENST00000482116.1

LMO7-210, Transcript of LIM domain 7, humanhuman

TSL 3

Gene LMO7, Length 935 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO7-210ENST00000482116 LRCH3Q96II8 777 aa12.07□□□□□ -0.48
LMO7-210ENST00000482116 SOWAHBA6NEL2 793 aa12.06□□□□□ -0.48
LMO7-210ENST00000482116 HDGFP51858 240 aaKnown RBP12.06□□□□□ -0.48
LMO7-210ENST00000482116 PTGDRQ13258 359 aa12.06□□□□□ -0.48
LMO7-210ENST00000482116 NUDT18Q6ZVK8 323 aa12.06□□□□□ -0.48
LMO7-210ENST00000482116 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.06□□□□□ -0.48
LMO7-210ENST00000482116 TULP1O00294 542 aaPredicted RBP12.05□□□□□ -0.48
LMO7-210ENST00000482116 FCHSD2O94868 740 aa12.05□□□□□ -0.48
LMO7-210ENST00000482116 CCDC88BA6NC98 1476 aa12.05□□□□□ -0.48
LMO7-210ENST00000482116 PLA2G2EQ9NZK7 142 aa12.04□□□□□ -0.48
LMO7-210ENST00000482116 RBM26Q5T8P6 1007 aaKnown RBP12.03□□□□□ -0.48
LMO7-210ENST00000482116 PRDM2Q13029 1718 aa12.03□□□□□ -0.48
LMO7-210ENST00000482116 TTC13Q8NBP0 860 aa12.02□□□□□ -0.49
LMO7-210ENST00000482116 SAMD7Q7Z3H4 446 aa12□□□□□ -0.49
LMO7-210ENST00000482116 HPS5Q9UPZ3 1129 aa12□□□□□ -0.49
LMO7-210ENST00000482116 C3orf80F5H4A9 247 aa11.99□□□□□ -0.49
LMO7-210ENST00000482116 NYAP1Q6ZVC0 841 aa11.99□□□□□ -0.49
LMO7-210ENST00000482116 TSR3Q9UJK0 312 aaKnown RBP11.99□□□□□ -0.49
LMO7-210ENST00000482116 ZNF608Q9ULD9 1512 aaPredicted RBP11.99□□□□□ -0.49
LMO7-210ENST00000482116 RNF40O75150 1001 aa11.97□□□□□ -0.49
LMO7-210ENST00000482116 SLC4A3P48751 1232 aa11.97□□□□□ -0.49
LMO7-210ENST00000482116 PPP4CP60510 307 aa11.97□□□□□ -0.49
LMO7-210ENST00000482116 HIC1Q14526 733 aa11.97□□□□□ -0.49
LMO7-210ENST00000482116 RBM46Q8TBY0 533 aaKnown RBP11.97□□□□□ -0.49
LMO7-210ENST00000482116 WBP1LQ9NX94 342 aa11.97□□□□□ -0.49
LMO7-210ENST00000482116 TOPBP1Q92547 1522 aa11.95□□□□□ -0.5
LMO7-210ENST00000482116 GPIHBP1Q8IV16 184 aa11.94□□□□□ -0.5
LMO7-210ENST00000482116 EYA1Q99502 592 aa11.93□□□□□ -0.5
LMO7-210ENST00000482116 IFT140Q96RY7 1462 aa11.92□□□□□ -0.5
LMO7-210ENST00000482116 ADGRG1Q9Y653 693 aa11.92□□□□□ -0.5
LMO7-210ENST00000482116 GNPATO15228 680 aa11.91□□□□□ -0.5
LMO7-210ENST00000482116 SWT1Q5T5J6 900 aaKnown RBP11.91□□□□□ -0.5
LMO7-210ENST00000482116 NECTIN2Q92692 538 aa11.91□□□□□ -0.5
LMO7-210ENST00000482116 RIMBP3CA6NJZ7 1639 aa11.9□□□□□ -0.5
LMO7-210ENST00000482116 RIMBP3BA6NNM3 1639 aa11.9□□□□□ -0.5
LMO7-210ENST00000482116 RIMBP3Q9UFD9 1639 aa11.9□□□□□ -0.5
LMO7-210ENST00000482116 DNAJB2P25686 324 aa11.9□□□□□ -0.5
LMO7-210ENST00000482116 FAM161AQ3B820 660 aa11.9□□□□□ -0.5
LMO7-210ENST00000482116 SLF2Q8IX21 1173 aa11.9□□□□□ -0.5
LMO7-210ENST00000482116 OATP04181 439 aa11.89□□□□□ -0.51
LMO7-210ENST00000482116 EIF4G3O43432 1585 aaKnown RBP11.88□□□□□ -0.51
LMO7-210ENST00000482116 DNMBPQ6XZF7 1577 aa11.88□□□□□ -0.51
LMO7-210ENST00000482116 AQRO60306 1485 aaKnown RBP eCLIP11.87□□□□□ -0.51
LMO7-210ENST00000482116 TARBP1Q13395 1621 aaKnown RBP11.86□□□□□ -0.51
LMO7-210ENST00000482116 ABCC8Q09428 1581 aa11.85□□□□□ -0.51
LMO7-210ENST00000482116 RCCD1A6NED2 376 aa11.85□□□□□ -0.51
LMO7-210ENST00000482116 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.84□□□□□ -0.51
LMO7-210ENST00000482116 GPR37O15354 613 aa11.84□□□□□ -0.51
LMO7-210ENST00000482116 ARHGEF11O15085 1522 aa11.84□□□□□ -0.51
LMO7-210ENST00000482116 FECHP22830 423 aa11.83□□□□□ -0.52
LMO7-210ENST00000482116 TMEM134Q9H6X4 195 aa11.83□□□□□ -0.52
LMO7-210ENST00000482116 CHD1O14646 1710 aa11.83□□□□□ -0.52
LMO7-210ENST00000482116 POLA1P09884 1462 aaPredicted RBP11.83□□□□□ -0.52
LMO7-210ENST00000482116 RAD54L2Q9Y4B4 1467 aa11.83□□□□□ -0.52
LMO7-210ENST00000482116 ITGBL1O95965 494 aaPredicted RBP11.82□□□□□ -0.52
LMO7-210ENST00000482116 KCNC4Q03721 635 aa11.82□□□□□ -0.52
LMO7-210ENST00000482116 IFFO2Q5TF58 517 aa11.82□□□□□ -0.52
LMO7-210ENST00000482116 PXYLP1Q8TE99 480 aa11.82□□□□□ -0.52
LMO7-210ENST00000482116 METTL3Q86U44 580 aaKnown RBP11.81□□□□□ -0.52
LMO7-210ENST00000482116 PRR14Q9BWN1 585 aa11.8□□□□□ -0.52
LMO7-210ENST00000482116 CYB5RLQ6IPT4 315 aa11.79□□□□□ -0.52
LMO7-210ENST00000482116 TDRD9Q8NDG6 1382 aaKnown RBP11.79□□□□□ -0.52
LMO7-210ENST00000482116 APLP1P51693 650 aa11.78□□□□□ -0.52
LMO7-210ENST00000482116 SOGA1O94964 1423 aa11.77□□□□□ -0.52
LMO7-210ENST00000482116 RSPH4AQ5TD94 716 aa11.77□□□□□ -0.53
LMO7-210ENST00000482116 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.76□□□□□ -0.53
LMO7-210ENST00000482116 LMOD2Q6P5Q4 547 aa11.75□□□□□ -0.53
LMO7-210ENST00000482116 FGD5Q6ZNL6 1462 aa11.75□□□□□ -0.53
LMO7-210ENST00000482116 CUX1P39880 1505 aa11.75□□□□□ -0.53
LMO7-210ENST00000482116 A0A0G2JS52 829 aa11.74□□□□□ -0.53
LMO7-210ENST00000482116 KMT5BQ4FZB7 885 aa11.74□□□□□ -0.53
LMO7-210ENST00000482116 MTRQ99707 1265 aa11.74□□□□□ -0.53
LMO7-210ENST00000482116 IL21Q9HBE4 155 aa11.74□□□□□ -0.53
LMO7-210ENST00000482116 MAP2K5Q13163 448 aa11.73□□□□□ -0.53
LMO7-210ENST00000482116 ARAP1Q96P48 1450 aa11.73□□□□□ -0.53
LMO7-210ENST00000482116 TJAP1Q5JTD0 557 aa11.72□□□□□ -0.53
LMO7-210ENST00000482116 SNAPC4Q5SXM2 1469 aa11.71□□□□□ -0.53
LMO7-210ENST00000482116 CFHP08603 1231 aa11.71□□□□□ -0.53
LMO7-210ENST00000482116 PCDHB3Q9Y5E6 796 aa11.71□□□□□ -0.53
LMO7-210ENST00000482116 COPS2P61201 443 aa11.7□□□□□ -0.54
LMO7-210ENST00000482116 DAXXQ9UER7 740 aaPredicted RBP11.7□□□□□ -0.54
LMO7-210ENST00000482116 MINK1Q8N4C8 1332 aaPredicted RBP11.69□□□□□ -0.54
LMO7-210ENST00000482116 RDH13Q8NBN7 331 aa11.69□□□□□ -0.54
LMO7-210ENST00000482116 IRF6O14896 467 aa11.68□□□□□ -0.54
LMO7-210ENST00000482116 NLRP7Q8WX94 980 aa11.68□□□□□ -0.54
LMO7-210ENST00000482116 DDX11L8A8MPP1 907 aa11.67□□□□□ -0.54
LMO7-210ENST00000482116 SLC24A1O60721 1099 aa11.67□□□□□ -0.54
LMO7-210ENST00000482116 SULF1Q8IWU6 871 aa11.67□□□□□ -0.54
LMO7-210ENST00000482116 CHMP7Q8WUX9 453 aaPredicted RBP11.67□□□□□ -0.54
LMO7-210ENST00000482116 CLASP1Q7Z460 1538 aa11.66□□□□□ -0.54
LMO7-210ENST00000482116 SUPT5HO00267 1087 aaKnown RBP11.66□□□□□ -0.54
LMO7-210ENST00000482116 RGS20O76081 388 aa11.66□□□□□ -0.54
LMO7-210ENST00000482116 SLC10A3P09131 477 aa11.66□□□□□ -0.54
LMO7-210ENST00000482116 KRI1Q8N9T8 703 aaKnown RBP11.66□□□□□ -0.54
LMO7-210ENST00000482116 WDR97A6NE52 1622 aa11.66□□□□□ -0.54
LMO7-210ENST00000482116 ACTN4O43707 911 aaKnown RBP11.65□□□□□ -0.54
LMO7-210ENST00000482116 ZNF516Q92618 1163 aa11.65□□□□□ -0.54
LMO7-210ENST00000482116 PHOX2BQ99453 314 aa11.65□□□□□ -0.54
LMO7-210ENST00000482116 GRIN2BQ13224 1484 aa11.64□□□□□ -0.55
LMO7-210ENST00000482116 MAGI1Q96QZ7 1491 aaPredicted RBP11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms