RNA–Protein interactions for RNA: ENST00000482116.1

LMO7-210, Transcript of LIM domain 7, humanhuman

TSL 3

Gene LMO7, Length 935 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO7-210ENST00000482116 AEBP2Q6ZN18 517 aaPredicted RBP29.07■■■□□ 2.24
LMO7-210ENST00000482116 CHIC1Q5VXU3 224 aa28.12■■■□□ 2.09
LMO7-210ENST00000482116 SENP3Q9H4L4 574 aaPredicted RBP24.85■■□□□ 1.57
LMO7-210ENST00000482116 PHF23Q9BUL5 403 aaPredicted RBP24.62■■□□□ 1.53
LMO7-210ENST00000482116 FOXD1Q16676 465 aa23.03■■□□□ 1.28
LMO7-210ENST00000482116 PLPPR3Q6T4P5 718 aa22.74■■□□□ 1.23
LMO7-210ENST00000482116 ADRA2BP18089 450 aa21.87■■□□□ 1.09
LMO7-210ENST00000482116 PPP6R1Q9UPN7 881 aa21.85■■□□□ 1.09
LMO7-210ENST00000482116 PIAS4Q8N2W9 510 aaPredicted RBP21.71■■□□□ 1.07
LMO7-210ENST00000482116 MSH5O43196 834 aa21.46■■□□□ 1.03
LMO7-210ENST00000482116 SCAF1Q9H7N4 1312 aaKnown RBP20.13■□□□□ 0.81
LMO7-210ENST00000482116 POTEDQ86YR6 584 aa20.09■□□□□ 0.81
LMO7-210ENST00000482116 PPP4R3CPQ6ZMV5 832 aa19.97■□□□□ 0.79
LMO7-210ENST00000482116 MAPK8IP2Q13387 824 aaPredicted RBP19.92■□□□□ 0.78
LMO7-210ENST00000482116 DMRT2Q9Y5R5 561 aa19.74■□□□□ 0.75
LMO7-210ENST00000482116 CNKSR2Q8WXI2 1034 aa19.5■□□□□ 0.71
LMO7-210ENST00000482116 NCBP3Q53F19 620 aaKnown RBP19.43■□□□□ 0.7
LMO7-210ENST00000482116 RNF216Q9NWF9 866 aaPredicted RBP19.19■□□□□ 0.66
LMO7-210ENST00000482116 HOXD11P31277 338 aaPredicted RBP19.17■□□□□ 0.66
LMO7-210ENST00000482116 KCNA4P22459 653 aa19.08■□□□□ 0.64
LMO7-210ENST00000482116 DCAF8L1A6NGE4 600 aa19.03■□□□□ 0.64
LMO7-210ENST00000482116 NPM3O75607 178 aaKnown RBP19.03■□□□□ 0.64
LMO7-210ENST00000482116 DNAJC5BQ9UF47 199 aa18.47■□□□□ 0.55
LMO7-210ENST00000482116 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.38■□□□□ 0.532e-7■□□□□ 11.3
LMO7-210ENST00000482116 RNF39Q9H2S5 420 aa18.29■□□□□ 0.52
LMO7-210ENST00000482116 CACNB1Q02641 598 aaPredicted RBP18.17■□□□□ 0.5
LMO7-210ENST00000482116 SLC4A1APQ9BWU0 796 aaKnown RBP18.17■□□□□ 0.5
LMO7-210ENST00000482116 C1QBPQ07021 282 aaKnown RBP18.11■□□□□ 0.49
LMO7-210ENST00000482116 SLC4A2P04920 1241 aa18.01■□□□□ 0.47
LMO7-210ENST00000482116 U3KPZ7 1027 aaPredicted RBP17.94■□□□□ 0.46
LMO7-210ENST00000482116 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.72■□□□□ 0.43
LMO7-210ENST00000482116 HNRNPUL2Q1KMD3 747 aaKnown RBP17.72■□□□□ 0.43
LMO7-210ENST00000482116 FOXD4L1Q9NU39 408 aa17.7■□□□□ 0.42
LMO7-210ENST00000482116 MYCNP04198 464 aaPredicted RBP17.65■□□□□ 0.42
LMO7-210ENST00000482116 APLP2Q06481 763 aa17.65■□□□□ 0.42
LMO7-210ENST00000482116 SAMD1Q6SPF0 538 aaPredicted RBP17.61■□□□□ 0.41
LMO7-210ENST00000482116 CAPN15O75808 1086 aa17.59■□□□□ 0.41
LMO7-210ENST00000482116 SPINK5Q9NQ38 1064 aaPredicted RBP17.55■□□□□ 0.4
LMO7-210ENST00000482116 ZBTB22O15209 634 aa17.48■□□□□ 0.39
LMO7-210ENST00000482116 TRHP20396 242 aaPredicted RBP17.42■□□□□ 0.38
LMO7-210ENST00000482116 ZNF219Q9P2Y4 722 aaPredicted RBP17.4■□□□□ 0.38
LMO7-210ENST00000482116 DSG3P32926 999 aa17.29■□□□□ 0.36
LMO7-210ENST00000482116 EHMT2Q96KQ7 1210 aa17.26■□□□□ 0.35
LMO7-210ENST00000482116 ABCB7O75027 752 aa17.19■□□□□ 0.34
LMO7-210ENST00000482116 CSRNP3Q8WYN3 585 aa17.13■□□□□ 0.33
LMO7-210ENST00000482116 ATXN8OSP0DMR3 200 aa17.12■□□□□ 0.33
LMO7-210ENST00000482116 ATF5Q9Y2D1 282 aaPredicted RBP17.11■□□□□ 0.33
LMO7-210ENST00000482116 POLA2Q14181 598 aa17.02■□□□□ 0.32
LMO7-210ENST00000482116 ZBTB12Q9Y330 459 aaPredicted RBP16.77■□□□□ 0.28
LMO7-210ENST00000482116 RBM42Q9BTD8 480 aaKnown RBP16.59■□□□□ 0.25
LMO7-210ENST00000482116 FBLN2P98095 1184 aa16.58■□□□□ 0.24
LMO7-210ENST00000482116 OSCARQ8IYS5 282 aa16.45■□□□□ 0.22
LMO7-210ENST00000482116 MKRN4PQ13434 485 aaPredicted RBP16.35■□□□□ 0.21
LMO7-210ENST00000482116 AKT1S1Q96B36 256 aa16.26■□□□□ 0.19
LMO7-210ENST00000482116 SPDYE2BA6NHP3 402 aa16.25■□□□□ 0.19
LMO7-210ENST00000482116 SPDYE6P0CI01 402 aa16.25■□□□□ 0.19
LMO7-210ENST00000482116 SPDYE2Q495Y8 402 aa16.25■□□□□ 0.19
LMO7-210ENST00000482116 NISCHQ9Y2I1 1504 aa16.19■□□□□ 0.18
LMO7-210ENST00000482116 ZNF692Q9BU19 519 aaPredicted RBP16.15■□□□□ 0.18
LMO7-210ENST00000482116 REM2Q8IYK8 340 aaPredicted RBP16.08■□□□□ 0.16
LMO7-210ENST00000482116 SSUH2Q9Y2M2 353 aa16.02■□□□□ 0.16
LMO7-210ENST00000482116 CHRDL2Q6WN34 429 aa15.99■□□□□ 0.15
LMO7-210ENST00000482116 SPDYE4A6NLX3 237 aa15.91■□□□□ 0.14
LMO7-210ENST00000482116 PABPN1Q86U42 306 aaKnown RBP eCLIP15.9■□□□□ 0.14
LMO7-210ENST00000482116 PITPNM1O00562 1244 aa15.89■□□□□ 0.13
LMO7-210ENST00000482116 SPDYE1Q8NFV5 336 aaPredicted RBP15.88■□□□□ 0.13
LMO7-210ENST00000482116 POTEHQ6S545 545 aa15.87■□□□□ 0.13
LMO7-210ENST00000482116 CLEC11AQ9Y240 323 aa15.85■□□□□ 0.13
LMO7-210ENST00000482116 PIP4P2Q8N4L2 257 aa15.67■□□□□ 0.1
LMO7-210ENST00000482116 PRR29P0C7W0 189 aa15.64■□□□□ 0.09
LMO7-210ENST00000482116 FXR2P51116 673 aaKnown RBP eCLIP15.64■□□□□ 0.09
LMO7-210ENST00000482116 STAG3Q9UJ98 1225 aa15.62■□□□□ 0.09
LMO7-210ENST00000482116 FKBP8Q14318 412 aa15.59■□□□□ 0.09
LMO7-210ENST00000482116 PRKAR2AP13861 404 aaKnown RBP15.53■□□□□ 0.08
LMO7-210ENST00000482116 PROM2Q8N271 834 aa15.49■□□□□ 0.07
LMO7-210ENST00000482116 CHADLQ6NUI6 762 aa15.43■□□□□ 0.06
LMO7-210ENST00000482116 HAX1O00165 279 aa15.35■□□□□ 0.05
LMO7-210ENST00000482116 CREBZFQ9NS37 354 aa15.27■□□□□ 0.04
LMO7-210ENST00000482116 FARP1Q9Y4F1 1045 aaPredicted RBP15.26■□□□□ 0.03
LMO7-210ENST00000482116 PLEKHG5O94827 1062 aa15.2■□□□□ 0.02
LMO7-210ENST00000482116 FBXO3Q9UK99 471 aa15.19■□□□□ 0.02
LMO7-210ENST00000482116 MIER1Q8N108 512 aa15.17■□□□□ 0.02
LMO7-210ENST00000482116 C19orf67A6NJJ6 358 aa15.13■□□□□ 0.01
LMO7-210ENST00000482116 NPM1P06748 294 aaKnown RBP eCLIP15.13■□□□□ 0.01
LMO7-210ENST00000482116 PLCD3Q8N3E9 789 aa15.13■□□□□ 0.01
LMO7-210ENST00000482116 SP7Q8TDD2 431 aaPredicted RBP15.1■□□□□ 0.01
LMO7-210ENST00000482116 CD44P16070 742 aaKnown RBP15.07■□□□□ 0
LMO7-210ENST00000482116 EVX2Q03828 476 aa15.05■□□□□ -0
LMO7-210ENST00000482116 MNX1P50219 401 aaPredicted RBP15.02■□□□□ -0
LMO7-210ENST00000482116 PAK3O75914 559 aaPredicted RBP15□□□□□ -0.01
LMO7-210ENST00000482116 ZBTB47Q9UFB7 747 aaPredicted RBP15□□□□□ -0.01
LMO7-210ENST00000482116 ZRANB1Q9UGI0 708 aa14.94□□□□□ -0.02
LMO7-210ENST00000482116 VASPP50552 380 aaPredicted RBP14.93□□□□□ -0.02
LMO7-210ENST00000482116 KLHL34Q8N239 644 aa14.85□□□□□ -0.03
LMO7-210ENST00000482116 ZNF579Q8NAF0 562 aaKnown RBP14.83□□□□□ -0.04
LMO7-210ENST00000482116 TSPYL2Q9H2G4 693 aaPredicted RBP14.83□□□□□ -0.04
LMO7-210ENST00000482116 GABBR2O75899 941 aa14.81□□□□□ -0.04
LMO7-210ENST00000482116 CLCN6P51797 869 aa14.81□□□□□ -0.04
LMO7-210ENST00000482116 RASEFQ8IZ41 740 aa14.75□□□□□ -0.05
LMO7-210ENST00000482116 PHF12Q96QT6 1004 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 74.8 ms