RNA–Protein interactions for RNA: ENST00000477937.2

HDAC7-222, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 410 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-222ENST00000477937 PPP1R15AO75807 674 aaPredicted RBP20.77■□□□□ 0.92
HDAC7-222ENST00000477937 SLC26A8Q96RN1 970 aa20.77■□□□□ 0.92
HDAC7-222ENST00000477937 ZFYVE9O95405 1425 aa20.77■□□□□ 0.91
HDAC7-222ENST00000477937 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.76■□□□□ 0.91
HDAC7-222ENST00000477937 TRIM52Q96A61 297 aa20.76■□□□□ 0.91
HDAC7-222ENST00000477937 SCAF1Q9H7N4 1312 aaKnown RBP20.73■□□□□ 0.91
HDAC7-222ENST00000477937 PLEKHG1Q9ULL1 1385 aa20.72■□□□□ 0.91
HDAC7-222ENST00000477937 XIRP1Q702N8 1843 aaKnown RBP20.72■□□□□ 0.91
HDAC7-222ENST00000477937 KCNA6P17658 529 aa20.72■□□□□ 0.91
HDAC7-222ENST00000477937 PIP4K2BP78356 416 aa20.72■□□□□ 0.91
HDAC7-222ENST00000477937 SENP3Q9H4L4 574 aaPredicted RBP20.71■□□□□ 0.91
HDAC7-222ENST00000477937 KIF1BO60333 1816 aa20.69■□□□□ 0.9
HDAC7-222ENST00000477937 NUTM2DQ5VT03 806 aaPredicted RBP20.68■□□□□ 0.9
HDAC7-222ENST00000477937 SLC4A1APQ9BWU0 796 aaKnown RBP20.68■□□□□ 0.9
HDAC7-222ENST00000477937 CHD2O14647 1828 aaKnown RBP20.68■□□□□ 0.9
HDAC7-222ENST00000477937 TBX22Q9Y458 520 aa20.67■□□□□ 0.9
HDAC7-222ENST00000477937 TRPM2O94759 1503 aa20.67■□□□□ 0.9
HDAC7-222ENST00000477937 CLTCL1P53675 1640 aa20.67■□□□□ 0.9
HDAC7-222ENST00000477937 ZNF326Q5BKZ1 582 aaKnown RBP20.66■□□□□ 0.9
HDAC7-222ENST00000477937 PROSER2Q86WR7 435 aaPredicted RBP20.66■□□□□ 0.9
HDAC7-222ENST00000477937 ALKQ9UM73 1620 aa20.65■□□□□ 0.9
HDAC7-222ENST00000477937 NWD1Q149M9 1564 aa20.65■□□□□ 0.9
HDAC7-222ENST00000477937 NKTRP30414 1462 aaKnown RBP20.63■□□□□ 0.89
HDAC7-222ENST00000477937 DIP2AQ14689 1571 aa20.63■□□□□ 0.89
HDAC7-222ENST00000477937 TMEM94Q12767 1356 aa20.62■□□□□ 0.89
HDAC7-222ENST00000477937 ADAMTS13Q76LX8 1427 aa20.61■□□□□ 0.89
HDAC7-222ENST00000477937 HSPA1LP34931 641 aa20.6■□□□□ 0.89
HDAC7-222ENST00000477937 ACIN1Q9UKV3 1341 aaKnown RBP20.59■□□□□ 0.89
HDAC7-222ENST00000477937 RBM33Q96EV2 1170 aaKnown RBP20.59■□□□□ 0.89
HDAC7-222ENST00000477937 PIK3R4Q99570 1358 aa20.58■□□□□ 0.88
HDAC7-222ENST00000477937 DISP3Q9P2K9 1392 aa20.57■□□□□ 0.88
HDAC7-222ENST00000477937 SETD5Q9C0A6 1442 aa20.56■□□□□ 0.88
HDAC7-222ENST00000477937 MPHOSPH9Q99550 1183 aa20.56■□□□□ 0.88
HDAC7-222ENST00000477937 NEXMIFQ5QGS0 1516 aa20.56■□□□□ 0.88
HDAC7-222ENST00000477937 SETBP1Q9Y6X0 1596 aa20.55■□□□□ 0.88
HDAC7-222ENST00000477937 FOXD1Q16676 465 aa20.55■□□□□ 0.88
HDAC7-222ENST00000477937 NRXN3Q9Y4C0 1643 aa20.55■□□□□ 0.88
HDAC7-222ENST00000477937 MSH6P52701 1360 aa20.54■□□□□ 0.88
HDAC7-222ENST00000477937 VGFO15240 615 aaPredicted RBP20.52■□□□□ 0.88
HDAC7-222ENST00000477937 AMOTL2Q9Y2J4 779 aa20.52■□□□□ 0.88
HDAC7-222ENST00000477937 NCOA3Q9Y6Q9 1424 aa20.52■□□□□ 0.87
HDAC7-222ENST00000477937 RPGRIP1LQ68CZ1 1315 aa20.52■□□□□ 0.87
HDAC7-222ENST00000477937 FAM135BQ49AJ0 1406 aa20.5■□□□□ 0.87
HDAC7-222ENST00000477937 PPLO60437 1756 aa20.49■□□□□ 0.87
HDAC7-222ENST00000477937 C14orf37Q86TY3 774 aa20.49■□□□□ 0.87
HDAC7-222ENST00000477937 CCDC144AA2RUR9 1427 aa20.49■□□□□ 0.87
HDAC7-222ENST00000477937 PTPRUQ92729 1446 aa20.49■□□□□ 0.87
HDAC7-222ENST00000477937 RAB3GAP2Q9H2M9 1393 aa20.47■□□□□ 0.87
HDAC7-222ENST00000477937 ROBO1Q9Y6N7 1651 aa20.47■□□□□ 0.87
HDAC7-222ENST00000477937 SLAIN2Q9P270 581 aa20.46■□□□□ 0.87
HDAC7-222ENST00000477937 XRN1Q8IZH2 1706 aaKnown RBP20.46■□□□□ 0.87
HDAC7-222ENST00000477937 METP08581 1390 aa20.46■□□□□ 0.87
HDAC7-222ENST00000477937 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.45■□□□□ 0.86
HDAC7-222ENST00000477937 C19orf44Q9H6X5 657 aa20.45■□□□□ 0.86
HDAC7-222ENST00000477937 RGL3Q3MIN7 710 aa20.43■□□□□ 0.86
HDAC7-222ENST00000477937 CADPS2Q86UW7 1296 aa20.43■□□□□ 0.86
HDAC7-222ENST00000477937 ATF3P18847 181 aa20.42■□□□□ 0.86
HDAC7-222ENST00000477937 SETD1AO15047 1707 aaKnown RBP20.41■□□□□ 0.86
HDAC7-222ENST00000477937 MED1Q15648 1581 aaPredicted RBP20.41■□□□□ 0.86
HDAC7-222ENST00000477937 SPATA31E1Q6ZUB1 1445 aa20.4■□□□□ 0.86
HDAC7-222ENST00000477937 IFT172Q9UG01 1749 aa20.39■□□□□ 0.86
HDAC7-222ENST00000477937 ANKRD30BQ9BXX2 1392 aa20.38■□□□□ 0.85
HDAC7-222ENST00000477937 HRCP23327 699 aa20.38■□□□□ 0.85
HDAC7-222ENST00000477937 ILDR2Q71H61 639 aa20.37■□□□□ 0.85
HDAC7-222ENST00000477937 PHLPP1O60346 1717 aa20.36■□□□□ 0.85
HDAC7-222ENST00000477937 DCCP43146 1447 aa20.36■□□□□ 0.85
HDAC7-222ENST00000477937 ADGRF5Q8IZF2 1346 aa20.34■□□□□ 0.85
HDAC7-222ENST00000477937 NALCNQ8IZF0 1738 aa20.32■□□□□ 0.84
HDAC7-222ENST00000477937 PTCH1Q13635 1447 aa20.31■□□□□ 0.84
HDAC7-222ENST00000477937 ADGRL3Q9HAR2 1447 aa20.31■□□□□ 0.84
HDAC7-222ENST00000477937 PHF23Q9BUL5 403 aaPredicted RBP20.3■□□□□ 0.84
HDAC7-222ENST00000477937 ROBO2Q9HCK4 1378 aa20.29■□□□□ 0.84
HDAC7-222ENST00000477937 PRAG1Q86YV5 1406 aa20.28■□□□□ 0.84
HDAC7-222ENST00000477937 BRINP3Q76B58 766 aa20.27■□□□□ 0.84
HDAC7-222ENST00000477937 PIK3C2GO75747 1445 aa20.27■□□□□ 0.83
HDAC7-222ENST00000477937 MST1RQ04912 1400 aa20.27■□□□□ 0.83
HDAC7-222ENST00000477937 COL16A1Q07092 1604 aaPredicted RBP20.26■□□□□ 0.83
HDAC7-222ENST00000477937 AHDC1Q5TGY3 1603 aaPredicted RBP20.25■□□□□ 0.83
HDAC7-222ENST00000477937 JCADQ9P266 1359 aa20.24■□□□□ 0.83
HDAC7-222ENST00000477937 MYOM2P54296 1465 aa20.24■□□□□ 0.83
HDAC7-222ENST00000477937 TMEM132EQ6IEE7 984 aa20.23■□□□□ 0.83
HDAC7-222ENST00000477937 STK26Q9P289 416 aa20.23■□□□□ 0.83
HDAC7-222ENST00000477937 ASXL1Q8IXJ9 1541 aa20.22■□□□□ 0.83
HDAC7-222ENST00000477937 LRPPRCP42704 1394 aaKnown RBP20.22■□□□□ 0.83
HDAC7-222ENST00000477937 NRXN1Q9ULB1 1477 aa20.22■□□□□ 0.83
HDAC7-222ENST00000477937 KNDC1Q76NI1 1749 aa20.22■□□□□ 0.83
HDAC7-222ENST00000477937 LAMC1P11047 1609 aa20.21■□□□□ 0.83
HDAC7-222ENST00000477937 SOCS7O14512 581 aa20.21■□□□□ 0.83
HDAC7-222ENST00000477937 C14orf93Q9H972 538 aaKnown RBP20.21■□□□□ 0.83
HDAC7-222ENST00000477937 ABCC11Q96J66 1382 aa20.21■□□□□ 0.83
HDAC7-222ENST00000477937 TECPR2O15040 1411 aa20.2■□□□□ 0.82
HDAC7-222ENST00000477937 NHSL1Q5SYE7 1610 aa20.2■□□□□ 0.82
HDAC7-222ENST00000477937 C1orf167Q5SNV9 1468 aa20.19■□□□□ 0.82
HDAC7-222ENST00000477937 CFAP70Q5T0N1 1121 aa20.19■□□□□ 0.82
HDAC7-222ENST00000477937 YTHDC2Q9H6S0 1430 aaKnown RBP20.19■□□□□ 0.82
HDAC7-222ENST00000477937 WAPLQ7Z5K2 1190 aa20.18■□□□□ 0.82
HDAC7-222ENST00000477937 DHX57Q6P158 1386 aaKnown RBP20.18■□□□□ 0.82
HDAC7-222ENST00000477937 SHPRHQ149N8 1683 aa20.17■□□□□ 0.82
HDAC7-222ENST00000477937 DCAF11Q8TEB1 546 aa20.17■□□□□ 0.82
HDAC7-222ENST00000477937 KDM2AQ9Y2K7 1162 aa20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms