RNA–Protein interactions for RNA: ENST00000476259.1

RAPGEF3-208, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 3

Gene RAPGEF3, Length 824 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-208ENST00000476259 TRIM52Q96A61 297 aa26.92■■□□□ 1.9
RAPGEF3-208ENST00000476259 SLC26A8Q96RN1 970 aa26.92■■□□□ 1.9
RAPGEF3-208ENST00000476259 PPP1R15AO75807 674 aaPredicted RBP26.91■■□□□ 1.9
RAPGEF3-208ENST00000476259 BCANQ96GW7 911 aa26.91■■□□□ 1.9
RAPGEF3-208ENST00000476259 PLEKHG1Q9ULL1 1385 aa26.91■■□□□ 1.9
RAPGEF3-208ENST00000476259 TRPM2O94759 1503 aa26.9■■□□□ 1.9
RAPGEF3-208ENST00000476259 CLTCL1P53675 1640 aa26.9■■□□□ 1.9
RAPGEF3-208ENST00000476259 KIF1BO60333 1816 aa26.9■■□□□ 1.9
RAPGEF3-208ENST00000476259 TOM1O60784 492 aa26.9■■□□□ 1.9
RAPGEF3-208ENST00000476259 ALKQ9UM73 1620 aa26.88■■□□□ 1.89
RAPGEF3-208ENST00000476259 ABCF1Q8NE71 845 aaKnown RBP eCLIP26.88■■□□□ 1.89
RAPGEF3-208ENST00000476259 SENP3Q9H4L4 574 aaPredicted RBP26.88■■□□□ 1.89
RAPGEF3-208ENST00000476259 CHD2O14647 1828 aaKnown RBP26.88■■□□□ 1.89
RAPGEF3-208ENST00000476259 NWD1Q149M9 1564 aa26.88■■□□□ 1.89
RAPGEF3-208ENST00000476259 SCAF1Q9H7N4 1312 aaKnown RBP26.86■■□□□ 1.89
RAPGEF3-208ENST00000476259 KCNA6P17658 529 aa26.84■■□□□ 1.89
RAPGEF3-208ENST00000476259 PIP4K2BP78356 416 aa26.84■■□□□ 1.89
RAPGEF3-208ENST00000476259 NUTM2DQ5VT03 806 aaPredicted RBP26.84■■□□□ 1.89
RAPGEF3-208ENST00000476259 SLC4A1APQ9BWU0 796 aaKnown RBP26.82■■□□□ 1.88
RAPGEF3-208ENST00000476259 DIP2AQ14689 1571 aa26.82■■□□□ 1.88
RAPGEF3-208ENST00000476259 NKTRP30414 1462 aaKnown RBP26.81■■□□□ 1.88
RAPGEF3-208ENST00000476259 ADAMTS13Q76LX8 1427 aa26.78■■□□□ 1.88
RAPGEF3-208ENST00000476259 ZNF326Q5BKZ1 582 aaKnown RBP26.77■■□□□ 1.88
RAPGEF3-208ENST00000476259 NRXN3Q9Y4C0 1643 aa26.76■■□□□ 1.87
RAPGEF3-208ENST00000476259 TMEM94Q12767 1356 aa26.76■■□□□ 1.87
RAPGEF3-208ENST00000476259 TBX22Q9Y458 520 aa26.76■■□□□ 1.87
RAPGEF3-208ENST00000476259 NEXMIFQ5QGS0 1516 aa26.75■■□□□ 1.87
RAPGEF3-208ENST00000476259 PROSER2Q86WR7 435 aaPredicted RBP26.75■■□□□ 1.87
RAPGEF3-208ENST00000476259 SETBP1Q9Y6X0 1596 aa26.72■■□□□ 1.87
RAPGEF3-208ENST00000476259 HSPA1LP34931 641 aa26.71■■□□□ 1.87
RAPGEF3-208ENST00000476259 RBM33Q96EV2 1170 aaKnown RBP26.71■■□□□ 1.87
RAPGEF3-208ENST00000476259 SETD5Q9C0A6 1442 aa26.7■■□□□ 1.86
RAPGEF3-208ENST00000476259 PIK3R4Q99570 1358 aa26.69■■□□□ 1.86
RAPGEF3-208ENST00000476259 FOXD1Q16676 465 aa26.68■■□□□ 1.86
RAPGEF3-208ENST00000476259 PPLO60437 1756 aa26.68■■□□□ 1.86
RAPGEF3-208ENST00000476259 MPHOSPH9Q99550 1183 aa26.66■■□□□ 1.86
RAPGEF3-208ENST00000476259 DISP3Q9P2K9 1392 aa26.64■■□□□ 1.86
RAPGEF3-208ENST00000476259 XRN1Q8IZH2 1706 aaKnown RBP26.64■■□□□ 1.85
RAPGEF3-208ENST00000476259 ACIN1Q9UKV3 1341 aaKnown RBP26.64■■□□□ 1.85
RAPGEF3-208ENST00000476259 MSH6P52701 1360 aa26.63■■□□□ 1.85
RAPGEF3-208ENST00000476259 PTPRUQ92729 1446 aa26.63■■□□□ 1.85
RAPGEF3-208ENST00000476259 RAB3GAP2Q9H2M9 1393 aa26.61■■□□□ 1.85
RAPGEF3-208ENST00000476259 ROBO1Q9Y6N7 1651 aa26.61■■□□□ 1.85
RAPGEF3-208ENST00000476259 CCDC144AA2RUR9 1427 aa26.61■■□□□ 1.85
RAPGEF3-208ENST00000476259 SETD1AO15047 1707 aaKnown RBP26.59■■□□□ 1.85
RAPGEF3-208ENST00000476259 NCOA3Q9Y6Q9 1424 aa26.59■■□□□ 1.85
RAPGEF3-208ENST00000476259 AMOTL2Q9Y2J4 779 aa26.59■■□□□ 1.85
RAPGEF3-208ENST00000476259 SIPA1L2Q9P2F8 1722 aaPredicted RBP26.59■■□□□ 1.85
RAPGEF3-208ENST00000476259 IFT172Q9UG01 1749 aa26.58■■□□□ 1.85
RAPGEF3-208ENST00000476259 RPGRIP1LQ68CZ1 1315 aa26.57■■□□□ 1.84
RAPGEF3-208ENST00000476259 FAM135BQ49AJ0 1406 aa26.56■■□□□ 1.84
RAPGEF3-208ENST00000476259 VGFO15240 615 aaPredicted RBP26.56■■□□□ 1.84
RAPGEF3-208ENST00000476259 METP08581 1390 aa26.56■■□□□ 1.84
RAPGEF3-208ENST00000476259 C14orf37Q86TY3 774 aa26.54■■□□□ 1.84
RAPGEF3-208ENST00000476259 MED1Q15648 1581 aaPredicted RBP26.54■■□□□ 1.84
RAPGEF3-208ENST00000476259 SPATA31E1Q6ZUB1 1445 aa26.51■■□□□ 1.83
RAPGEF3-208ENST00000476259 SLAIN2Q9P270 581 aa26.49■■□□□ 1.83
RAPGEF3-208ENST00000476259 RGL3Q3MIN7 710 aa26.48■■□□□ 1.83
RAPGEF3-208ENST00000476259 C19orf44Q9H6X5 657 aa26.47■■□□□ 1.83
RAPGEF3-208ENST00000476259 PHLPP1O60346 1717 aa26.47■■□□□ 1.83
RAPGEF3-208ENST00000476259 NALCNQ8IZF0 1738 aa26.47■■□□□ 1.83
RAPGEF3-208ENST00000476259 ATF3P18847 181 aa26.44■■□□□ 1.82
RAPGEF3-208ENST00000476259 CADPS2Q86UW7 1296 aa26.44■■□□□ 1.82
RAPGEF3-208ENST00000476259 DCCP43146 1447 aa26.42■■□□□ 1.82
RAPGEF3-208ENST00000476259 ANKRD30BQ9BXX2 1392 aa26.42■■□□□ 1.82
RAPGEF3-208ENST00000476259 ADGRF5Q8IZF2 1346 aa26.41■■□□□ 1.82
RAPGEF3-208ENST00000476259 PTCH1Q13635 1447 aa26.39■■□□□ 1.82
RAPGEF3-208ENST00000476259 HRCP23327 699 aa26.39■■□□□ 1.82
RAPGEF3-208ENST00000476259 ILDR2Q71H61 639 aa26.39■■□□□ 1.82
RAPGEF3-208ENST00000476259 ADGRL3Q9HAR2 1447 aa26.39■■□□□ 1.81
RAPGEF3-208ENST00000476259 PRAG1Q86YV5 1406 aa26.37■■□□□ 1.81
RAPGEF3-208ENST00000476259 COL16A1Q07092 1604 aaPredicted RBP26.36■■□□□ 1.81
RAPGEF3-208ENST00000476259 PIK3C2GO75747 1445 aa26.35■■□□□ 1.81
RAPGEF3-208ENST00000476259 ROBO2Q9HCK4 1378 aa26.34■■□□□ 1.81
RAPGEF3-208ENST00000476259 AHDC1Q5TGY3 1603 aaPredicted RBP26.34■■□□□ 1.81
RAPGEF3-208ENST00000476259 MST1RQ04912 1400 aa26.33■■□□□ 1.81
RAPGEF3-208ENST00000476259 KNDC1Q76NI1 1749 aa26.33■■□□□ 1.81
RAPGEF3-208ENST00000476259 LAMC1P11047 1609 aa26.32■■□□□ 1.8
RAPGEF3-208ENST00000476259 ASXL1Q8IXJ9 1541 aa26.32■■□□□ 1.8
RAPGEF3-208ENST00000476259 MYOM2P54296 1465 aa26.31■■□□□ 1.8
RAPGEF3-208ENST00000476259 PHF23Q9BUL5 403 aaPredicted RBP26.29■■□□□ 1.8
RAPGEF3-208ENST00000476259 NRXN1Q9ULB1 1477 aa26.29■■□□□ 1.8
RAPGEF3-208ENST00000476259 NHSL1Q5SYE7 1610 aa26.28■■□□□ 1.8
RAPGEF3-208ENST00000476259 BRINP3Q76B58 766 aa26.28■■□□□ 1.8
RAPGEF3-208ENST00000476259 TECPR2O15040 1411 aa26.25■■□□□ 1.79
RAPGEF3-208ENST00000476259 JCADQ9P266 1359 aa26.25■■□□□ 1.79
RAPGEF3-208ENST00000476259 LRPPRCP42704 1394 aaKnown RBP26.24■■□□□ 1.79
RAPGEF3-208ENST00000476259 TMEM132EQ6IEE7 984 aa26.24■■□□□ 1.79
RAPGEF3-208ENST00000476259 STK26Q9P289 416 aa26.24■■□□□ 1.79
RAPGEF3-208ENST00000476259 SHPRHQ149N8 1683 aa26.24■■□□□ 1.79
RAPGEF3-208ENST00000476259 YTHDC2Q9H6S0 1430 aaKnown RBP26.22■■□□□ 1.79
RAPGEF3-208ENST00000476259 CDC42BPGQ6DT37 1551 aa26.21■■□□□ 1.79
RAPGEF3-208ENST00000476259 C14orf93Q9H972 538 aaKnown RBP26.21■■□□□ 1.79
RAPGEF3-208ENST00000476259 C1orf167Q5SNV9 1468 aa26.21■■□□□ 1.79
RAPGEF3-208ENST00000476259 ABCC11Q96J66 1382 aa26.2■■□□□ 1.79
RAPGEF3-208ENST00000476259 CFAP70Q5T0N1 1121 aa26.18■■□□□ 1.78
RAPGEF3-208ENST00000476259 WAPLQ7Z5K2 1190 aa26.16■■□□□ 1.78
RAPGEF3-208ENST00000476259 SOCS7O14512 581 aa26.15■■□□□ 1.78
RAPGEF3-208ENST00000476259 DCAF11Q8TEB1 546 aa26.15■■□□□ 1.78
RAPGEF3-208ENST00000476259 DHX57Q6P158 1386 aaKnown RBP26.15■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms