RNA–Protein interactions for RNA: ENST00000467762.2

RIF1-209, Transcript of replication timing regulatory factor 1, humanhuman

TSL 4

Gene RIF1, Length 545 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-209ENST00000467762 NEUROD1Q13562 356 aa7.56□□□□□ -1.2
RIF1-209ENST00000467762 TYW1BQ6NUM6 668 aa7.56□□□□□ -1.2
RIF1-209ENST00000467762 ZBED2Q9BTP6 218 aa7.56□□□□□ -1.2
RIF1-209ENST00000467762 FANCD2Q9BXW9 1451 aa7.55□□□□□ -1.2
RIF1-209ENST00000467762 LAMC3Q9Y6N6 1575 aa7.55□□□□□ -1.2
RIF1-209ENST00000467762 CFAP43Q8NDM7 1665 aa7.55□□□□□ -1.2
RIF1-209ENST00000467762 COL9A1P20849 921 aa7.55□□□□□ -1.2
RIF1-209ENST00000467762 KANK4Q5T7N3 995 aaPredicted RBP7.54□□□□□ -1.2
RIF1-209ENST00000467762 FBXW7Q969H0 707 aa7.54□□□□□ -1.2
RIF1-209ENST00000467762 ARIH1Q9Y4X5 557 aaPredicted RBP7.54□□□□□ -1.2
RIF1-209ENST00000467762 LRRC9Q6ZRR7 1453 aa7.54□□□□□ -1.2
RIF1-209ENST00000467762 BRPF1P55201 1214 aaPredicted RBP7.53□□□□□ -1.2
RIF1-209ENST00000467762 RBM33Q96EV2 1170 aaKnown RBP7.53□□□□□ -1.2
RIF1-209ENST00000467762 EPAS1Q99814 870 aa7.53□□□□□ -1.2
RIF1-209ENST00000467762 SLC4A5Q9BY07 1137 aa7.53□□□□□ -1.2
RIF1-209ENST00000467762 FYCO1Q9BQS8 1478 aa7.53□□□□□ -1.2
RIF1-209ENST00000467762 CTTNBP2Q8WZ74 1663 aa7.53□□□□□ -1.2
RIF1-209ENST00000467762 SETD5Q9C0A6 1442 aa7.52□□□□□ -1.2
RIF1-209ENST00000467762 SPDYE16A6NNV3 312 aaPredicted RBP7.52□□□□□ -1.21
RIF1-209ENST00000467762 PPP1R3GB7ZBB8 358 aa7.52□□□□□ -1.21
RIF1-209ENST00000467762 FMN1Q68DA7 1419 aa7.52□□□□□ -1.21
RIF1-209ENST00000467762 CASKIN1Q8WXD9 1431 aa7.52□□□□□ -1.21
RIF1-209ENST00000467762 PRIM1P49642 420 aaKnown RBP7.51□□□□□ -1.21
RIF1-209ENST00000467762 PROX2Q3B8N5 592 aa7.51□□□□□ -1.21
RIF1-209ENST00000467762 KCNV2Q8TDN2 545 aa7.51□□□□□ -1.21
RIF1-209ENST00000467762 CCDC9Q9Y3X0 531 aaKnown RBP7.51□□□□□ -1.21
RIF1-209ENST00000467762 TOPBP1Q92547 1522 aa7.51□□□□□ -1.21
RIF1-209ENST00000467762 BHMG1C9JSJ3 638 aaPredicted RBP7.5□□□□□ -1.21
RIF1-209ENST00000467762 EN1Q05925 392 aaPredicted RBP7.5□□□□□ -1.21
RIF1-209ENST00000467762 TSR1Q2NL82 804 aaKnown RBP7.5□□□□□ -1.21
RIF1-209ENST00000467762 C6orf132Q5T0Z8 1188 aa7.5□□□□□ -1.21
RIF1-209ENST00000467762 THOC2Q8NI27 1593 aaKnown RBP7.5□□□□□ -1.21
RIF1-209ENST00000467762 KIF21AQ7Z4S6 1674 aa7.49□□□□□ -1.21
RIF1-209ENST00000467762 KCTD12Q96CX2 325 aaKnown RBP7.49□□□□□ -1.21
RIF1-209ENST00000467762 PDS5BQ9NTI5 1447 aa7.49□□□□□ -1.21
RIF1-209ENST00000467762 POLA1P09884 1462 aaPredicted RBP7.49□□□□□ -1.21
RIF1-209ENST00000467762 WDR97A6NE52 1622 aa7.49□□□□□ -1.21
RIF1-209ENST00000467762 GRXCR2A6NFK2 248 aa7.48□□□□□ -1.21
RIF1-209ENST00000467762 RAB3GAP2Q9H2M9 1393 aa7.47□□□□□ -1.21
RIF1-209ENST00000467762 ZBTB7CA1YPR0 619 aa7.47□□□□□ -1.21
RIF1-209ENST00000467762 MAP3K7O43318 606 aa7.47□□□□□ -1.21
RIF1-209ENST00000467762 NEUROD2Q15784 382 aa7.47□□□□□ -1.21
RIF1-209ENST00000467762 STAC3Q96MF2 364 aa7.47□□□□□ -1.21
RIF1-209ENST00000467762 RSPH6AQ9H0K4 717 aa7.46□□□□□ -1.22
RIF1-209ENST00000467762 PCF11O94913 1555 aaKnown RBP7.46□□□□□ -1.22
RIF1-209ENST00000467762 OSBPP22059 807 aa7.45□□□□□ -1.22
RIF1-209ENST00000467762 LMOD2Q6P5Q4 547 aa7.45□□□□□ -1.22
RIF1-209ENST00000467762 MRPL50Q8N5N7 158 aaKnown RBP7.45□□□□□ -1.22
RIF1-209ENST00000467762 CDHR5Q9HBB8 845 aa7.45□□□□□ -1.22
RIF1-209ENST00000467762 RABGEF1Q9UJ41 708 aa7.45□□□□□ -1.22
RIF1-209ENST00000467762 SAMD9Q5K651 1589 aa7.45□□□□□ -1.22
RIF1-209ENST00000467762 ABCA5Q8WWZ7 1642 aa7.45□□□□□ -1.22
RIF1-209ENST00000467762 P3H3Q8IVL6 736 aa7.44□□□□□ -1.22
RIF1-209ENST00000467762 ZMYND15Q9H091 742 aa7.44□□□□□ -1.22
RIF1-209ENST00000467762 NBPF3Q9H094 633 aa7.44□□□□□ -1.22
RIF1-209ENST00000467762 KIAA1468Q9P260 1216 aa7.44□□□□□ -1.22
RIF1-209ENST00000467762 HCSTQ9UBK5 93 aa7.44□□□□□ -1.22
RIF1-209ENST00000467762 PHLDB1Q86UU1 1377 aa7.44□□□□□ -1.22
RIF1-209ENST00000467762 TRIM6-TRIM34B2RNG4 842 aa7.43□□□□□ -1.22
RIF1-209ENST00000467762 MLLT3P42568 568 aaPredicted RBP7.43□□□□□ -1.22
RIF1-209ENST00000467762 ARHGEF1Q92888 912 aaKnown RBP7.43□□□□□ -1.22
RIF1-209ENST00000467762 GAPVD1Q14C86 1478 aa7.43□□□□□ -1.22
RIF1-209ENST00000467762 CCDC18Q5T9S5 1454 aa7.43□□□□□ -1.22
RIF1-209ENST00000467762 RAD54L2Q9Y4B4 1467 aa7.43□□□□□ -1.22
RIF1-209ENST00000467762 MAPKBP1O60336 1514 aa7.42□□□□□ -1.22
RIF1-209ENST00000467762 SUPT6HQ7KZ85 1726 aaKnown RBP7.42□□□□□ -1.22
RIF1-209ENST00000467762 WNT2BQ93097 391 aa7.42□□□□□ -1.22
RIF1-209ENST00000467762 SEPT9Q9UHD8 586 aaPredicted RBP7.42□□□□□ -1.22
RIF1-209ENST00000467762 GOLGA8CPA6NN73 597 aa7.41□□□□□ -1.22
RIF1-209ENST00000467762 PTPN5P54829 565 aa7.41□□□□□ -1.22
RIF1-209ENST00000467762 THSD4Q6ZMP0 1018 aa7.41□□□□□ -1.22
RIF1-209ENST00000467762 ARID3AQ99856 593 aa7.41□□□□□ -1.22
RIF1-209ENST00000467762 TSKSQ9UJT2 592 aa7.41□□□□□ -1.22
RIF1-209ENST00000467762 FGD6Q6ZV73 1430 aa7.41□□□□□ -1.22
RIF1-209ENST00000467762 SNAPC4Q5SXM2 1469 aa7.41□□□□□ -1.22
RIF1-209ENST00000467762 URB2Q14146 1524 aaKnown RBP7.41□□□□□ -1.22
RIF1-209ENST00000467762 EHBP1L1Q8N3D4 1523 aa7.41□□□□□ -1.22
RIF1-209ENST00000467762 FAM50AQ14320 339 aaKnown RBP7.4□□□□□ -1.22
RIF1-209ENST00000467762 FAM198AQ9UFP1 575 aa7.4□□□□□ -1.22
RIF1-209ENST00000467762 MTUS2Q5JR59 1369 aa7.4□□□□□ -1.22
RIF1-209ENST00000467762 FHOD3Q2V2M9 1422 aa7.4□□□□□ -1.22
RIF1-209ENST00000467762 GRIN2BQ13224 1484 aa7.4□□□□□ -1.22
RIF1-209ENST00000467762 HFM1A2PYH4 1435 aa7.39□□□□□ -1.23
RIF1-209ENST00000467762 UACAQ9BZF9 1416 aa7.39□□□□□ -1.23
RIF1-209ENST00000467762 ONECUT3O60422 494 aaPredicted RBP7.39□□□□□ -1.23
RIF1-209ENST00000467762 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.39□□□□□ -1.23
RIF1-209ENST00000467762 MYOM3Q5VTT5 1437 aa7.38□□□□□ -1.23
RIF1-209ENST00000467762 AKNAQ7Z591 1439 aa7.38□□□□□ -1.23
RIF1-209ENST00000467762 C3orf80F5H4A9 247 aa7.38□□□□□ -1.23
RIF1-209ENST00000467762 CCER2I3L3R5 266 aa7.38□□□□□ -1.23
RIF1-209ENST00000467762 PPP1R15AO75807 674 aaPredicted RBP7.38□□□□□ -1.23
RIF1-209ENST00000467762 PDIA4P13667 645 aaKnown RBP7.38□□□□□ -1.23
RIF1-209ENST00000467762 ITGAEP38570 1179 aa7.38□□□□□ -1.23
RIF1-209ENST00000467762 CDCA7LQ96GN5 454 aa7.38□□□□□ -1.23
RIF1-209ENST00000467762 YTHDC1Q96MU7 727 aaKnown RBP7.38□□□□□ -1.23
RIF1-209ENST00000467762 TARBP1Q13395 1621 aaKnown RBP7.38□□□□□ -1.23
RIF1-209ENST00000467762 HECW1Q76N89 1606 aa7.38□□□□□ -1.23
RIF1-209ENST00000467762 BCAMP50895 628 aa7.37□□□□□ -1.23
RIF1-209ENST00000467762 PRSS12P56730 875 aa7.37□□□□□ -1.23
RIF1-209ENST00000467762 LAPTM4BQ86VI4 370 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms