RNA–Protein interactions for RNA: ENST00000465743.2

COL2A1-203, Transcript of collagen type II alpha 1 chain, humanhuman

TSL 4

Gene COL2A1, Length 546 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-203ENST00000465743 CHGAP10645 457 aaKnown RBP30.52■■■□□ 2.48
COL2A1-203ENST00000465743 SLC26A8Q96RN1 970 aa30.51■■■□□ 2.47
COL2A1-203ENST00000465743 PIP4K2BP78356 416 aa30.48■■■□□ 2.47
COL2A1-203ENST00000465743 SCAF1Q9H7N4 1312 aaKnown RBP30.47■■■□□ 2.47
COL2A1-203ENST00000465743 CLTCL1P53675 1640 aa30.47■■■□□ 2.47
COL2A1-203ENST00000465743 NWD1Q149M9 1564 aa30.45■■■□□ 2.47
COL2A1-203ENST00000465743 NUTM2DQ5VT03 806 aaPredicted RBP30.45■■■□□ 2.47
COL2A1-203ENST00000465743 PLEKHG1Q9ULL1 1385 aa30.44■■■□□ 2.46
COL2A1-203ENST00000465743 TRPM2O94759 1503 aa30.43■■■□□ 2.46
COL2A1-203ENST00000465743 PPP1R15AO75807 674 aaPredicted RBP30.42■■■□□ 2.46
COL2A1-203ENST00000465743 BCANQ96GW7 911 aa30.42■■■□□ 2.46
COL2A1-203ENST00000465743 TOM1O60784 492 aa30.4■■■□□ 2.46
COL2A1-203ENST00000465743 TRIM52Q96A61 297 aa30.39■■■□□ 2.46
COL2A1-203ENST00000465743 CHD2O14647 1828 aaKnown RBP30.38■■■□□ 2.45
COL2A1-203ENST00000465743 KCNA6P17658 529 aa30.35■■■□□ 2.45
COL2A1-203ENST00000465743 RBM33Q96EV2 1170 aaKnown RBP30.35■■■□□ 2.45
COL2A1-203ENST00000465743 TMEM94Q12767 1356 aa30.35■■■□□ 2.45
COL2A1-203ENST00000465743 ADAMTS13Q76LX8 1427 aa30.35■■■□□ 2.45
COL2A1-203ENST00000465743 NKTRP30414 1462 aaKnown RBP30.35■■■□□ 2.45
COL2A1-203ENST00000465743 HSPA1LP34931 641 aa30.34■■■□□ 2.45
COL2A1-203ENST00000465743 KIF1BO60333 1816 aa30.33■■■□□ 2.45
COL2A1-203ENST00000465743 NRXN3Q9Y4C0 1643 aa30.33■■■□□ 2.45
COL2A1-203ENST00000465743 DIP2AQ14689 1571 aa30.32■■■□□ 2.44
COL2A1-203ENST00000465743 ABCF1Q8NE71 845 aaKnown RBP eCLIP30.31■■■□□ 2.44
COL2A1-203ENST00000465743 NEXMIFQ5QGS0 1516 aa30.29■■■□□ 2.44
COL2A1-203ENST00000465743 HDGFP51858 240 aaKnown RBP30.29■■■□□ 2.44
COL2A1-203ENST00000465743 DISP3Q9P2K9 1392 aa30.28■■■□□ 2.44
COL2A1-203ENST00000465743 SLC4A1APQ9BWU0 796 aaKnown RBP30.27■■■□□ 2.44
COL2A1-203ENST00000465743 ZNF326Q5BKZ1 582 aaKnown RBP30.26■■■□□ 2.43
COL2A1-203ENST00000465743 PROSER2Q86WR7 435 aaPredicted RBP30.26■■■□□ 2.43
COL2A1-203ENST00000465743 SETBP1Q9Y6X0 1596 aa30.24■■■□□ 2.43
COL2A1-203ENST00000465743 FOXD1Q16676 465 aa30.24■■■□□ 2.43
COL2A1-203ENST00000465743 TBX22Q9Y458 520 aa30.23■■■□□ 2.43
COL2A1-203ENST00000465743 PTPRUQ92729 1446 aa30.2■■■□□ 2.42
COL2A1-203ENST00000465743 XRN1Q8IZH2 1706 aaKnown RBP30.18■■■□□ 2.42
COL2A1-203ENST00000465743 ROBO1Q9Y6N7 1651 aa30.17■■■□□ 2.42
COL2A1-203ENST00000465743 MED1Q15648 1581 aaPredicted RBP30.15■■■□□ 2.42
COL2A1-203ENST00000465743 PPLO60437 1756 aa30.15■■■□□ 2.42
COL2A1-203ENST00000465743 PIK3R4Q99570 1358 aa30.14■■■□□ 2.41
COL2A1-203ENST00000465743 SETD5Q9C0A6 1442 aa30.13■■■□□ 2.41
COL2A1-203ENST00000465743 MSH6P52701 1360 aa30.13■■■□□ 2.41
COL2A1-203ENST00000465743 SETD1AO15047 1707 aaKnown RBP30.12■■■□□ 2.41
COL2A1-203ENST00000465743 METP08581 1390 aa30.11■■■□□ 2.41
COL2A1-203ENST00000465743 SIPA1L2Q9P2F8 1722 aaPredicted RBP30.1■■■□□ 2.41
COL2A1-203ENST00000465743 MPHOSPH9Q99550 1183 aa30.09■■■□□ 2.41
COL2A1-203ENST00000465743 ILDR2Q71H61 639 aa30.08■■■□□ 2.41
COL2A1-203ENST00000465743 FAM135BQ49AJ0 1406 aa30.07■■■□□ 2.4
COL2A1-203ENST00000465743 RAB3GAP2Q9H2M9 1393 aa30.07■■■□□ 2.4
COL2A1-203ENST00000465743 AMOTL2Q9Y2J4 779 aa30.07■■■□□ 2.4
COL2A1-203ENST00000465743 CCDC144AA2RUR9 1427 aa30.05■■■□□ 2.4
COL2A1-203ENST00000465743 IFT172Q9UG01 1749 aa30.04■■■□□ 2.4
COL2A1-203ENST00000465743 C14orf37Q86TY3 774 aa30.03■■■□□ 2.4
COL2A1-203ENST00000465743 SPATA31E1Q6ZUB1 1445 aa30.01■■■□□ 2.39
COL2A1-203ENST00000465743 NCOA3Q9Y6Q9 1424 aa30.01■■■□□ 2.39
COL2A1-203ENST00000465743 NALCNQ8IZF0 1738 aa29.99■■■□□ 2.39
COL2A1-203ENST00000465743 PHLPP1O60346 1717 aa29.98■■■□□ 2.39
COL2A1-203ENST00000465743 SLAIN2Q9P270 581 aa29.97■■■□□ 2.39
COL2A1-203ENST00000465743 RPGRIP1LQ68CZ1 1315 aa29.96■■■□□ 2.39
COL2A1-203ENST00000465743 VGFO15240 615 aaPredicted RBP29.94■■■□□ 2.38
COL2A1-203ENST00000465743 RGL3Q3MIN7 710 aa29.94■■■□□ 2.38
COL2A1-203ENST00000465743 C19orf44Q9H6X5 657 aa29.92■■■□□ 2.38
COL2A1-203ENST00000465743 ADGRF5Q8IZF2 1346 aa29.91■■■□□ 2.38
COL2A1-203ENST00000465743 COL16A1Q07092 1604 aaPredicted RBP29.9■■■□□ 2.38
COL2A1-203ENST00000465743 ATF3P18847 181 aa29.89■■■□□ 2.38
COL2A1-203ENST00000465743 ADGRL3Q9HAR2 1447 aa29.88■■■□□ 2.37
COL2A1-203ENST00000465743 ROBO2Q9HCK4 1378 aa29.88■■■□□ 2.37
COL2A1-203ENST00000465743 DCCP43146 1447 aa29.88■■■□□ 2.37
COL2A1-203ENST00000465743 PTCH1Q13635 1447 aa29.88■■■□□ 2.37
COL2A1-203ENST00000465743 ASXL1Q8IXJ9 1541 aa29.87■■■□□ 2.37
COL2A1-203ENST00000465743 CADPS2Q86UW7 1296 aa29.87■■■□□ 2.37
COL2A1-203ENST00000465743 MST1RQ04912 1400 aa29.84■■■□□ 2.37
COL2A1-203ENST00000465743 AHDC1Q5TGY3 1603 aaPredicted RBP29.84■■■□□ 2.37
COL2A1-203ENST00000465743 PIK3C2GO75747 1445 aa29.82■■■□□ 2.36
COL2A1-203ENST00000465743 PRAG1Q86YV5 1406 aa29.82■■■□□ 2.36
COL2A1-203ENST00000465743 ACIN1Q9UKV3 1341 aaKnown RBP29.82■■■□□ 2.36
COL2A1-203ENST00000465743 ANKRD30BQ9BXX2 1392 aa29.81■■■□□ 2.36
COL2A1-203ENST00000465743 PHF23Q9BUL5 403 aaPredicted RBP29.8■■■□□ 2.36
COL2A1-203ENST00000465743 BRINP3Q76B58 766 aa29.78■■■□□ 2.36
COL2A1-203ENST00000465743 NHSL1Q5SYE7 1610 aa29.77■■■□□ 2.36
COL2A1-203ENST00000465743 KNDC1Q76NI1 1749 aa29.76■■■□□ 2.35
COL2A1-203ENST00000465743 MYOM2P54296 1465 aa29.74■■■□□ 2.35
COL2A1-203ENST00000465743 NRXN1Q9ULB1 1477 aa29.74■■■□□ 2.35
COL2A1-203ENST00000465743 JCADQ9P266 1359 aa29.72■■■□□ 2.35
COL2A1-203ENST00000465743 TMEM132EQ6IEE7 984 aa29.71■■■□□ 2.35
COL2A1-203ENST00000465743 STK26Q9P289 416 aa29.71■■■□□ 2.35
COL2A1-203ENST00000465743 SHPRHQ149N8 1683 aa29.71■■■□□ 2.35
COL2A1-203ENST00000465743 SOCS7O14512 581 aa29.7■■■□□ 2.35
COL2A1-203ENST00000465743 LAMC1P11047 1609 aa29.7■■■□□ 2.34
COL2A1-203ENST00000465743 C1orf167Q5SNV9 1468 aa29.69■■■□□ 2.34
COL2A1-203ENST00000465743 TECPR2O15040 1411 aa29.69■■■□□ 2.34
COL2A1-203ENST00000465743 LRP6O75581 1613 aa29.68■■■□□ 2.34
COL2A1-203ENST00000465743 LRPPRCP42704 1394 aaKnown RBP29.68■■■□□ 2.34
COL2A1-203ENST00000465743 CDC42BPGQ6DT37 1551 aa29.68■■■□□ 2.34
COL2A1-203ENST00000465743 DDX17Q92841 729 aaKnown RBP29.67■■■□□ 2.34
COL2A1-203ENST00000465743 RGS17Q9UGC6 210 aaPredicted RBP29.67■■■□□ 2.34
COL2A1-203ENST00000465743 PLEKHH1Q9ULM0 1364 aa29.66■■■□□ 2.34
COL2A1-203ENST00000465743 YTHDC2Q9H6S0 1430 aaKnown RBP29.65■■■□□ 2.34
COL2A1-203ENST00000465743 HRCP23327 699 aa29.65■■■□□ 2.34
COL2A1-203ENST00000465743 WAPLQ7Z5K2 1190 aa29.63■■■□□ 2.33
COL2A1-203ENST00000465743 CFAP70Q5T0N1 1121 aa29.62■■■□□ 2.33
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms