RNA–Protein interactions for RNA: ENST00000461766.1

CDHR3-202, Transcript of cadherin related family member 3, humanhuman

TSL 4

Gene CDHR3, Length 536 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-202ENST00000461766 ZNF454Q8N9F8 522 aa7.14□□□□□ -1.27
CDHR3-202ENST00000461766 CFAP43Q8NDM7 1665 aa7.14□□□□□ -1.27
CDHR3-202ENST00000461766 CDK11AQ9UQ88 783 aaPredicted RBP7.14□□□□□ -1.27
CDHR3-202ENST00000461766 TIAM1Q13009 1591 aa7.13□□□□□ -1.27
CDHR3-202ENST00000461766 AMHR2Q16671 573 aa7.13□□□□□ -1.27
CDHR3-202ENST00000461766 ZDHHC16Q969W1 377 aa7.13□□□□□ -1.27
CDHR3-202ENST00000461766 KDM4CQ9H3R0 1056 aa7.13□□□□□ -1.27
CDHR3-202ENST00000461766 MARVELD3Q96A59 401 aa7.12□□□□□ -1.27
CDHR3-202ENST00000461766 ATAD2BQ9ULI0 1458 aa7.11□□□□□ -1.27
CDHR3-202ENST00000461766 SETD5Q9C0A6 1442 aa7.11□□□□□ -1.27
CDHR3-202ENST00000461766 RAB3GAP2Q9H2M9 1393 aa7.11□□□□□ -1.27
CDHR3-202ENST00000461766 ANP32CO43423 234 aa7.11□□□□□ -1.27
CDHR3-202ENST00000461766 C6orf132Q5T0Z8 1188 aa7.11□□□□□ -1.27
CDHR3-202ENST00000461766 CERKQ8TCT0 537 aa7.11□□□□□ -1.27
CDHR3-202ENST00000461766 PPP1R15AO75807 674 aaPredicted RBP7.1□□□□□ -1.27
CDHR3-202ENST00000461766 ADAM33Q9BZ11 813 aa7.1□□□□□ -1.27
CDHR3-202ENST00000461766 DAXXQ9UER7 740 aaPredicted RBP7.1□□□□□ -1.27
CDHR3-202ENST00000461766 LHX6Q9UPM6 363 aa7.1□□□□□ -1.27
CDHR3-202ENST00000461766 PSDA5PKW4 1024 aaPredicted RBP7.09□□□□□ -1.27
CDHR3-202ENST00000461766 PARP9Q8IXQ6 854 aa7.09□□□□□ -1.27
CDHR3-202ENST00000461766 NESP48681 1621 aa7.09□□□□□ -1.28
CDHR3-202ENST00000461766 PRDM2Q13029 1718 aa7.08□□□□□ -1.28
CDHR3-202ENST00000461766 HOXB1P14653 301 aaPredicted RBP7.08□□□□□ -1.28
CDHR3-202ENST00000461766 PPP4R3BQ5MIZ7 849 aa7.08□□□□□ -1.28
CDHR3-202ENST00000461766 KCNH8Q96L42 1107 aa7.08□□□□□ -1.28
CDHR3-202ENST00000461766 RBM27Q9P2N5 1060 aaKnown RBP7.08□□□□□ -1.28
CDHR3-202ENST00000461766 TTLL12Q14166 644 aaPredicted RBP7.07□□□□□ -1.28
CDHR3-202ENST00000461766 PADI6Q6TGC4 694 aa7.07□□□□□ -1.28
CDHR3-202ENST00000461766 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP7.07□□□□□ -1.28
CDHR3-202ENST00000461766 HMGXB3Q12766 1538 aa7.06□□□□□ -1.28
CDHR3-202ENST00000461766 ARHGAP35Q9NRY4 1499 aa7.06□□□□□ -1.28
CDHR3-202ENST00000461766 FAM205CA6NFA0 338 aa7.06□□□□□ -1.28
CDHR3-202ENST00000461766 DEKP35659 375 aaKnown RBP7.06□□□□□ -1.28
CDHR3-202ENST00000461766 DDX10Q13206 875 aaKnown RBP7.06□□□□□ -1.28
CDHR3-202ENST00000461766 TTC13Q8NBP0 860 aa7.06□□□□□ -1.28
CDHR3-202ENST00000461766 HS3ST6Q96QI5 342 aa7.06□□□□□ -1.28
CDHR3-202ENST00000461766 BCL2L12Q9HB09 334 aa7.06□□□□□ -1.28
CDHR3-202ENST00000461766 PPP4R2Q9NY27 417 aa7.06□□□□□ -1.28
CDHR3-202ENST00000461766 POLR1AO95602 1720 aaPredicted RBP7.06□□□□□ -1.28
CDHR3-202ENST00000461766 KANK4Q5T7N3 995 aaPredicted RBP7.05□□□□□ -1.28
CDHR3-202ENST00000461766 IL27Q8NEV9 243 aa7.05□□□□□ -1.28
CDHR3-202ENST00000461766 FHAD1B1AJZ9 1412 aa7.04□□□□□ -1.28
CDHR3-202ENST00000461766 KIF27Q86VH2 1401 aa7.04□□□□□ -1.28
CDHR3-202ENST00000461766 ITGAEP38570 1179 aa7.04□□□□□ -1.28
CDHR3-202ENST00000461766 PRSS12P56730 875 aa7.04□□□□□ -1.28
CDHR3-202ENST00000461766 DDRGK1Q96HY6 314 aa7.04□□□□□ -1.28
CDHR3-202ENST00000461766 FAM117AQ9C073 453 aa7.04□□□□□ -1.28
CDHR3-202ENST00000461766 ADGRG1Q9Y653 693 aa7.04□□□□□ -1.28
CDHR3-202ENST00000461766 LRRC9Q6ZRR7 1453 aa7.04□□□□□ -1.28
CDHR3-202ENST00000461766 PPP1R3GB7ZBB8 358 aa7.03□□□□□ -1.28
CDHR3-202ENST00000461766 OATP04181 439 aa7.03□□□□□ -1.28
CDHR3-202ENST00000461766 GIGYF2Q6Y7W6 1299 aaKnown RBP7.03□□□□□ -1.28
CDHR3-202ENST00000461766 METTL3Q86U44 580 aaKnown RBP7.03□□□□□ -1.28
CDHR3-202ENST00000461766 CDCA7LQ96GN5 454 aa7.03□□□□□ -1.28
CDHR3-202ENST00000461766 PHOX2BQ99453 314 aa7.03□□□□□ -1.28
CDHR3-202ENST00000461766 TMUB1Q9BVT8 246 aa7.03□□□□□ -1.28
CDHR3-202ENST00000461766 THOC2Q8NI27 1593 aaKnown RBP7.03□□□□□ -1.28
CDHR3-202ENST00000461766 COL9A1P20849 921 aa7.02□□□□□ -1.29
CDHR3-202ENST00000461766 PTPREP23469 700 aa7.02□□□□□ -1.29
CDHR3-202ENST00000461766 CLCN1P35523 988 aa7.02□□□□□ -1.29
CDHR3-202ENST00000461766 FAM161AQ3B820 660 aa7.02□□□□□ -1.29
CDHR3-202ENST00000461766 PXYLP1Q8TE99 480 aa7.02□□□□□ -1.29
CDHR3-202ENST00000461766 REPIN1Q9BWE0 567 aaKnown RBP7.02□□□□□ -1.29
CDHR3-202ENST00000461766 GPCPD1Q9NPB8 672 aa7.02□□□□□ -1.29
CDHR3-202ENST00000461766 NOP58Q9Y2X3 529 aaKnown RBP7.02□□□□□ -1.29
CDHR3-202ENST00000461766 NCOA2Q15596 1464 aa7.02□□□□□ -1.29
CDHR3-202ENST00000461766 ABCA5Q8WWZ7 1642 aa7.01□□□□□ -1.29
CDHR3-202ENST00000461766 PLEKHG3A1L390 1219 aa7.01□□□□□ -1.29
CDHR3-202ENST00000461766 MDM2Q00987 491 aaPredicted RBP7.01□□□□□ -1.29
CDHR3-202ENST00000461766 TRIM52Q96A61 297 aa7.01□□□□□ -1.29
CDHR3-202ENST00000461766 ERBB3P21860 1342 aa7.01□□□□□ -1.29
CDHR3-202ENST00000461766 MS4A1P11836 297 aa7□□□□□ -1.29
CDHR3-202ENST00000461766 PCF11O94913 1555 aaKnown RBP6.99□□□□□ -1.29
CDHR3-202ENST00000461766 TONSLQ96HA7 1378 aa6.99□□□□□ -1.29
CDHR3-202ENST00000461766 HECW1Q76N89 1606 aa6.99□□□□□ -1.29
CDHR3-202ENST00000461766 RBM46Q8TBY0 533 aaKnown RBP6.99□□□□□ -1.29
CDHR3-202ENST00000461766 FAM198AQ9UFP1 575 aa6.99□□□□□ -1.29
CDHR3-202ENST00000461766 CUX1P39880 1505 aa6.99□□□□□ -1.29
CDHR3-202ENST00000461766 AQRO60306 1485 aaKnown RBP eCLIP6.98□□□□□ -1.29
CDHR3-202ENST00000461766 FYCO1Q9BQS8 1478 aa6.98□□□□□ -1.29
CDHR3-202ENST00000461766 EFCAB5A4FU69 1503 aa6.98□□□□□ -1.29
CDHR3-202ENST00000461766 GCC2Q8IWJ2 1684 aa6.98□□□□□ -1.29
CDHR3-202ENST00000461766 HNRNPUQ00839 825 aaKnown RBP eCLIP6.98□□□□□ -1.29
CDHR3-202ENST00000461766 RTL5Q5HYW3 569 aaPredicted RBP6.98□□□□□ -1.29
CDHR3-202ENST00000461766 TSKSQ9UJT2 592 aa6.98□□□□□ -1.29
CDHR3-202ENST00000461766 UACAQ9BZF9 1416 aa6.98□□□□□ -1.29
CDHR3-202ENST00000461766 PDS5BQ9NTI5 1447 aa6.98□□□□□ -1.29
CDHR3-202ENST00000461766 PTPN23Q9H3S7 1636 aa6.98□□□□□ -1.29
CDHR3-202ENST00000461766 TRIM6-TRIM34B2RNG4 842 aa6.97□□□□□ -1.29
CDHR3-202ENST00000461766 ANP32AP39687 249 aaKnown RBP6.97□□□□□ -1.29
CDHR3-202ENST00000461766 NLRP7Q8WX94 980 aa6.97□□□□□ -1.29
CDHR3-202ENST00000461766 RNF166Q96A37 237 aaPredicted RBP6.97□□□□□ -1.29
CDHR3-202ENST00000461766 KCNK17Q96T54 332 aa6.97□□□□□ -1.29
CDHR3-202ENST00000461766 FAM217BQ9NTX9 383 aaPredicted RBP6.97□□□□□ -1.29
CDHR3-202ENST00000461766 CNTLNQ9NXG0 1405 aa6.97□□□□□ -1.29
CDHR3-202ENST00000461766 LAMC3Q9Y6N6 1575 aa6.97□□□□□ -1.29
CDHR3-202ENST00000461766 CCDC18Q5T9S5 1454 aa6.97□□□□□ -1.29
CDHR3-202ENST00000461766 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP6.96□□□□□ -1.3
CDHR3-202ENST00000461766 NBPF26B4DH59 902 aa6.96□□□□□ -1.3
CDHR3-202ENST00000461766 SSTR3P32745 418 aaPredicted RBP6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms