RNA–Protein interactions for RNA: ENST00000461766.1

CDHR3-202, Transcript of cadherin related family member 3, humanhuman

TSL 4

Gene CDHR3, Length 536 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-202ENST00000461766 AEBP2Q6ZN18 517 aaPredicted RBP15.54■□□□□ 0.08
CDHR3-202ENST00000461766 CHIC1Q5VXU3 224 aa15.34■□□□□ 0.05
CDHR3-202ENST00000461766 SENP3Q9H4L4 574 aaPredicted RBP13.61□□□□□ -0.23
CDHR3-202ENST00000461766 PHF23Q9BUL5 403 aaPredicted RBP13.51□□□□□ -0.25
CDHR3-202ENST00000461766 PLPPR3Q6T4P5 718 aa12.58□□□□□ -0.4
CDHR3-202ENST00000461766 FOXD1Q16676 465 aa12.51□□□□□ -0.41
CDHR3-202ENST00000461766 MSH5O43196 834 aa12.05□□□□□ -0.48
CDHR3-202ENST00000461766 POTEDQ86YR6 584 aa11.93□□□□□ -0.5
CDHR3-202ENST00000461766 ADRA2BP18089 450 aa11.83□□□□□ -0.52
CDHR3-202ENST00000461766 PPP6R1Q9UPN7 881 aa11.82□□□□□ -0.52
CDHR3-202ENST00000461766 PIAS4Q8N2W9 510 aaPredicted RBP11.77□□□□□ -0.53
CDHR3-202ENST00000461766 KCNA4P22459 653 aa11.17□□□□□ -0.62
CDHR3-202ENST00000461766 PPP4R3CPQ6ZMV5 832 aa11.11□□□□□ -0.63
CDHR3-202ENST00000461766 NCBP3Q53F19 620 aaKnown RBP10.91□□□□□ -0.66
CDHR3-202ENST00000461766 SCAF1Q9H7N4 1312 aaKnown RBP10.83□□□□□ -0.68
CDHR3-202ENST00000461766 NPM3O75607 178 aaKnown RBP10.75□□□□□ -0.69
CDHR3-202ENST00000461766 CNKSR2Q8WXI2 1034 aa10.75□□□□□ -0.69
CDHR3-202ENST00000461766 SLC4A1APQ9BWU0 796 aaKnown RBP10.69□□□□□ -0.7
CDHR3-202ENST00000461766 EHMT2Q96KQ7 1210 aa10.68□□□□□ -0.7
CDHR3-202ENST00000461766 DMRT2Q9Y5R5 561 aa10.67□□□□□ -0.7
CDHR3-202ENST00000461766 MAPK8IP2Q13387 824 aaPredicted RBP10.64□□□□□ -0.71
CDHR3-202ENST00000461766 RNF216Q9NWF9 866 aaPredicted RBP10.47□□□□□ -0.73
CDHR3-202ENST00000461766 CSRNP3Q8WYN3 585 aa10.44□□□□□ -0.74
CDHR3-202ENST00000461766 DNAJC5BQ9UF47 199 aa10.43□□□□□ -0.74
CDHR3-202ENST00000461766 CACNB1Q02641 598 aaPredicted RBP10.42□□□□□ -0.74
CDHR3-202ENST00000461766 HOXD11P31277 338 aaPredicted RBP10.36□□□□□ -0.75
CDHR3-202ENST00000461766 DCAF8L1A6NGE4 600 aa10.33□□□□□ -0.76
CDHR3-202ENST00000461766 ZBTB22O15209 634 aa10.29□□□□□ -0.76
CDHR3-202ENST00000461766 FOXD4L1Q9NU39 408 aa10.21□□□□□ -0.77
CDHR3-202ENST00000461766 RNF39Q9H2S5 420 aa10.1□□□□□ -0.79
CDHR3-202ENST00000461766 SLC4A2P04920 1241 aa10.08□□□□□ -0.8
CDHR3-202ENST00000461766 C1QBPQ07021 282 aaKnown RBP10.07□□□□□ -0.8
CDHR3-202ENST00000461766 MYCNP04198 464 aaPredicted RBP9.94□□□□□ -0.82
CDHR3-202ENST00000461766 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.85□□□□□ -0.83
CDHR3-202ENST00000461766 ATXN8OSP0DMR3 200 aa9.84□□□□□ -0.83
CDHR3-202ENST00000461766 U3KPZ7 1027 aaPredicted RBP9.74□□□□□ -0.85
CDHR3-202ENST00000461766 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.71□□□□□ -0.86
CDHR3-202ENST00000461766 HNRNPUL2Q1KMD3 747 aaKnown RBP9.71□□□□□ -0.86
CDHR3-202ENST00000461766 NISCHQ9Y2I1 1504 aa9.71□□□□□ -0.86
CDHR3-202ENST00000461766 SAMD1Q6SPF0 538 aaPredicted RBP9.69□□□□□ -0.86
CDHR3-202ENST00000461766 ATF5Q9Y2D1 282 aaPredicted RBP9.63□□□□□ -0.87
CDHR3-202ENST00000461766 APLP2Q06481 763 aa9.56□□□□□ -0.88
CDHR3-202ENST00000461766 CAPN15O75808 1086 aa9.48□□□□□ -0.89
CDHR3-202ENST00000461766 ZNF219Q9P2Y4 722 aaPredicted RBP9.45□□□□□ -0.9
CDHR3-202ENST00000461766 FKBP8Q14318 412 aa9.42□□□□□ -0.9
CDHR3-202ENST00000461766 POTEHQ6S545 545 aa9.38□□□□□ -0.91
CDHR3-202ENST00000461766 SPINK5Q9NQ38 1064 aaPredicted RBP9.38□□□□□ -0.91
CDHR3-202ENST00000461766 DSG3P32926 999 aa9.36□□□□□ -0.91
CDHR3-202ENST00000461766 TRHP20396 242 aaPredicted RBP9.34□□□□□ -0.91
CDHR3-202ENST00000461766 POLA2Q14181 598 aa9.25□□□□□ -0.93
CDHR3-202ENST00000461766 MKRN4PQ13434 485 aaPredicted RBP9.23□□□□□ -0.93
CDHR3-202ENST00000461766 FBLN2P98095 1184 aa9.22□□□□□ -0.93
CDHR3-202ENST00000461766 RBM42Q9BTD8 480 aaKnown RBP9.19□□□□□ -0.94
CDHR3-202ENST00000461766 ABCB7O75027 752 aa9.17□□□□□ -0.94
CDHR3-202ENST00000461766 SPDYE4A6NLX3 237 aa9.15□□□□□ -0.94
CDHR3-202ENST00000461766 ZBTB12Q9Y330 459 aaPredicted RBP9.15□□□□□ -0.94
CDHR3-202ENST00000461766 AMER1Q5JTC6 1135 aaPredicted RBP9.09□□□□□ -0.95
CDHR3-202ENST00000461766 PROM2Q8N271 834 aa9.07□□□□□ -0.96
CDHR3-202ENST00000461766 RTN4Q9NQC3 1192 aaKnown RBP9.05□□□□□ -0.96
CDHR3-202ENST00000461766 FBXO3Q9UK99 471 aa9.02□□□□□ -0.97
CDHR3-202ENST00000461766 OSCARQ8IYS5 282 aa8.95□□□□□ -0.98
CDHR3-202ENST00000461766 SPDYE2BA6NHP3 402 aa8.92□□□□□ -0.98
CDHR3-202ENST00000461766 SPDYE6P0CI01 402 aa8.92□□□□□ -0.98
CDHR3-202ENST00000461766 SPDYE2Q495Y8 402 aa8.92□□□□□ -0.98
CDHR3-202ENST00000461766 CHRDL2Q6WN34 429 aa8.92□□□□□ -0.98
CDHR3-202ENST00000461766 ZNF692Q9BU19 519 aaPredicted RBP8.91□□□□□ -0.98
CDHR3-202ENST00000461766 VASPP50552 380 aaPredicted RBP8.89□□□□□ -0.99
CDHR3-202ENST00000461766 SSUH2Q9Y2M2 353 aa8.89□□□□□ -0.99
CDHR3-202ENST00000461766 AKT1S1Q96B36 256 aa8.82□□□□□ -1
CDHR3-202ENST00000461766 PABPN1Q86U42 306 aaKnown RBP eCLIP8.8□□□□□ -1
CDHR3-202ENST00000461766 IFNLR1Q8IU57 520 aaPredicted RBP8.78□□□□□ -1
CDHR3-202ENST00000461766 STAG3Q9UJ98 1225 aa8.76□□□□□ -1.01
CDHR3-202ENST00000461766 SP7Q8TDD2 431 aaPredicted RBP8.71□□□□□ -1.02
CDHR3-202ENST00000461766 PLCD3Q8N3E9 789 aa8.66□□□□□ -1.02
CDHR3-202ENST00000461766 KLHL34Q8N239 644 aa8.65□□□□□ -1.02
CDHR3-202ENST00000461766 SLC24A1O60721 1099 aa8.64□□□□□ -1.03
CDHR3-202ENST00000461766 REM2Q8IYK8 340 aaPredicted RBP8.64□□□□□ -1.03
CDHR3-202ENST00000461766 SPOCK2Q92563 424 aa8.64□□□□□ -1.03
CDHR3-202ENST00000461766 MIER1Q8N108 512 aa8.63□□□□□ -1.03
CDHR3-202ENST00000461766 HAX1O00165 279 aa8.6□□□□□ -1.03
CDHR3-202ENST00000461766 PKD2Q13563 968 aa8.6□□□□□ -1.03
CDHR3-202ENST00000461766 PIP4P2Q8N4L2 257 aa8.59□□□□□ -1.03
CDHR3-202ENST00000461766 SPDYE1Q8NFV5 336 aaPredicted RBP8.59□□□□□ -1.03
CDHR3-202ENST00000461766 PLEKHG5O94827 1062 aa8.58□□□□□ -1.04
CDHR3-202ENST00000461766 HRCP23327 699 aa8.57□□□□□ -1.04
CDHR3-202ENST00000461766 ZBTB47Q9UFB7 747 aaPredicted RBP8.56□□□□□ -1.04
CDHR3-202ENST00000461766 PITPNM1O00562 1244 aa8.53□□□□□ -1.04
CDHR3-202ENST00000461766 FXR2P51116 673 aaKnown RBP eCLIP8.51□□□□□ -1.05
CDHR3-202ENST00000461766 PELP1Q8IZL8 1130 aaKnown RBP8.51□□□□□ -1.05
CDHR3-202ENST00000461766 CLEC11AQ9Y240 323 aa8.51□□□□□ -1.05
CDHR3-202ENST00000461766 ECM2O94769 699 aaPredicted RBP8.49□□□□□ -1.05
CDHR3-202ENST00000461766 DCAF8L2P0C7V8 631 aa8.49□□□□□ -1.05
CDHR3-202ENST00000461766 PRR29P0C7W0 189 aa8.48□□□□□ -1.05
CDHR3-202ENST00000461766 CREBZFQ9NS37 354 aa8.45□□□□□ -1.06
CDHR3-202ENST00000461766 CIZ1Q9ULV3 898 aaPredicted RBP8.44□□□□□ -1.06
CDHR3-202ENST00000461766 RGL2O15211 777 aa8.41□□□□□ -1.06
CDHR3-202ENST00000461766 MNX1P50219 401 aaPredicted RBP8.41□□□□□ -1.06
CDHR3-202ENST00000461766 NUBP1P53384 320 aa8.41□□□□□ -1.06
CDHR3-202ENST00000461766 TRIM41Q8WV44 630 aa8.41□□□□□ -1.06
CDHR3-202ENST00000461766 PLCB2Q00722 1185 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms