RNA–Protein interactions for RNA: ENST00000453560.6

RAP1B-208, Transcript of RAP1B, member of RAS oncogene family, human

TSL 4

Gene RAP1B, Length 530 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAP1B-208	ENST00000453560	TOM1	O60784	492 aa		29.24	■■■□□ 2.27
RAP1B-208	ENST00000453560	CHGA	P10645	457 aa	Known RBP	29.24	■■■□□ 2.27
RAP1B-208	ENST00000453560	NWD1	Q149M9	1564 aa		29.24	■■■□□ 2.27
RAP1B-208	ENST00000453560	SLC26A8	Q96RN1	970 aa		29.24	■■■□□ 2.27
RAP1B-208	ENST00000453560	TRPM2	O94759	1503 aa		29.24	■■■□□ 2.27
RAP1B-208	ENST00000453560	CLTCL1	P53675	1640 aa		29.23	■■■□□ 2.27
RAP1B-208	ENST00000453560	HDGF	P51858	240 aa	Known RBP	29.22	■■■□□ 2.27
RAP1B-208	ENST00000453560	PPP1R15A	O75807	674 aa	Predicted RBP	29.19	■■■□□ 2.26
RAP1B-208	ENST00000453560	ABCF1	Q8NE71	845 aa	Known RBP eCLIP	29.19	■■■□□ 2.26
RAP1B-208	ENST00000453560	CHD2	O14647	1828 aa	Known RBP	29.19	■■■□□ 2.26
RAP1B-208	ENST00000453560	KCNA6	P17658	529 aa		29.18	■■■□□ 2.26
RAP1B-208	ENST00000453560	NKTR	P30414	1462 aa	Known RBP	29.17	■■■□□ 2.26
RAP1B-208	ENST00000453560	TRIM52	Q96A61	297 aa		29.16	■■■□□ 2.26
RAP1B-208	ENST00000453560	DIP2A	Q14689	1571 aa		29.16	■■■□□ 2.26
RAP1B-208	ENST00000453560	KIF1B	O60333	1816 aa		29.15	■■■□□ 2.26
RAP1B-208	ENST00000453560	PIP4K2B	P78356	416 aa		29.15	■■■□□ 2.26
RAP1B-208	ENST00000453560	BCAN	Q96GW7	911 aa		29.15	■■■□□ 2.26
RAP1B-208	ENST00000453560	ADAMTS13	Q76LX8	1427 aa		29.13	■■■□□ 2.25
RAP1B-208	ENST00000453560	SENP3	Q9H4L4	574 aa	Predicted RBP	29.13	■■■□□ 2.25
RAP1B-208	ENST00000453560	SCAF1	Q9H7N4	1312 aa	Known RBP	29.13	■■■□□ 2.25
RAP1B-208	ENST00000453560	NUTM2D	Q5VT03	806 aa	Predicted RBP	29.12	■■■□□ 2.25
RAP1B-208	ENST00000453560	TMEM94	Q12767	1356 aa		29.11	■■■□□ 2.25
RAP1B-208	ENST00000453560	TBX22	Q9Y458	520 aa		29.1	■■■□□ 2.25
RAP1B-208	ENST00000453560	NRXN3	Q9Y4C0	1643 aa		29.09	■■■□□ 2.25
RAP1B-208	ENST00000453560	SLC4A1AP	Q9BWU0	796 aa	Known RBP	29.09	■■■□□ 2.25
RAP1B-208	ENST00000453560	NEXMIF	Q5QGS0	1516 aa		29.08	■■■□□ 2.25
RAP1B-208	ENST00000453560	SETBP1	Q9Y6X0	1596 aa		29.07	■■■□□ 2.24
RAP1B-208	ENST00000453560	HSPA1L	P34931	641 aa		29.05	■■■□□ 2.24
RAP1B-208	ENST00000453560	PIK3R4	Q99570	1358 aa		29.04	■■■□□ 2.24
RAP1B-208	ENST00000453560	PROSER2	Q86WR7	435 aa	Predicted RBP	29.04	■■■□□ 2.24
RAP1B-208	ENST00000453560	ZNF326	Q5BKZ1	582 aa	Known RBP	29.03	■■■□□ 2.24
RAP1B-208	ENST00000453560	RBM33	Q96EV2	1170 aa	Known RBP	29	■■■□□ 2.23
RAP1B-208	ENST00000453560	SETD5	Q9C0A6	1442 aa		28.97	■■■□□ 2.23
RAP1B-208	ENST00000453560	DISP3	Q9P2K9	1392 aa		28.97	■■■□□ 2.23
RAP1B-208	ENST00000453560	XRN1	Q8IZH2	1706 aa	Known RBP	28.97	■■■□□ 2.23
RAP1B-208	ENST00000453560	PPL	O60437	1756 aa		28.96	■■■□□ 2.23
RAP1B-208	ENST00000453560	PTPRU	Q92729	1446 aa		28.95	■■■□□ 2.23
RAP1B-208	ENST00000453560	FOXD1	Q16676	465 aa		28.95	■■■□□ 2.22
RAP1B-208	ENST00000453560	NCOA3	Q9Y6Q9	1424 aa		28.94	■■■□□ 2.22
RAP1B-208	ENST00000453560	MPHOSPH9	Q99550	1183 aa		28.94	■■■□□ 2.22
RAP1B-208	ENST00000453560	MSH6	P52701	1360 aa		28.93	■■■□□ 2.22
RAP1B-208	ENST00000453560	FAM135B	Q49AJ0	1406 aa		28.93	■■■□□ 2.22
RAP1B-208	ENST00000453560	ACIN1	Q9UKV3	1341 aa	Known RBP	28.93	■■■□□ 2.22
RAP1B-208	ENST00000453560	ROBO1	Q9Y6N7	1651 aa		28.92	■■■□□ 2.22
RAP1B-208	ENST00000453560	SETD1A	O15047	1707 aa	Known RBP	28.91	■■■□□ 2.22
RAP1B-208	ENST00000453560	CCDC144A	A2RUR9	1427 aa		28.89	■■■□□ 2.22
RAP1B-208	ENST00000453560	AMOTL2	Q9Y2J4	779 aa		28.89	■■■□□ 2.22
RAP1B-208	ENST00000453560	MET	P08581	1390 aa		28.88	■■■□□ 2.21
RAP1B-208	ENST00000453560	SIPA1L2	Q9P2F8	1722 aa	Predicted RBP	28.88	■■■□□ 2.21
RAP1B-208	ENST00000453560	RPGRIP1L	Q68CZ1	1315 aa		28.88	■■■□□ 2.21
RAP1B-208	ENST00000453560	RAB3GAP2	Q9H2M9	1393 aa		28.88	■■■□□ 2.21
RAP1B-208	ENST00000453560	MED1	Q15648	1581 aa	Predicted RBP	28.87	■■■□□ 2.21
RAP1B-208	ENST00000453560	IFT172	Q9UG01	1749 aa		28.86	■■■□□ 2.21
RAP1B-208	ENST00000453560	VGF	O15240	615 aa	Predicted RBP	28.85	■■■□□ 2.21
RAP1B-208	ENST00000453560	SPATA31E1	Q6ZUB1	1445 aa		28.84	■■■□□ 2.21
RAP1B-208	ENST00000453560	SLAIN2	Q9P270	581 aa		28.8	■■■□□ 2.2
RAP1B-208	ENST00000453560	C14orf37	Q86TY3	774 aa		28.78	■■■□□ 2.2
RAP1B-208	ENST00000453560	C19orf44	Q9H6X5	657 aa		28.78	■■■□□ 2.2
RAP1B-208	ENST00000453560	DCC	P43146	1447 aa		28.76	■■■□□ 2.19
RAP1B-208	ENST00000453560	ILDR2	Q71H61	639 aa		28.75	■■■□□ 2.19
RAP1B-208	ENST00000453560	NALCN	Q8IZF0	1738 aa		28.74	■■■□□ 2.19
RAP1B-208	ENST00000453560	PRAG1	Q86YV5	1406 aa		28.74	■■■□□ 2.19
RAP1B-208	ENST00000453560	PHLPP1	O60346	1717 aa		28.74	■■■□□ 2.19
RAP1B-208	ENST00000453560	CADPS2	Q86UW7	1296 aa		28.73	■■■□□ 2.19
RAP1B-208	ENST00000453560	PTCH1	Q13635	1447 aa		28.72	■■■□□ 2.19
RAP1B-208	ENST00000453560	ATF3	P18847	181 aa		28.71	■■■□□ 2.19
RAP1B-208	ENST00000453560	RGL3	Q3MIN7	710 aa		28.71	■■■□□ 2.19
RAP1B-208	ENST00000453560	ANKRD30B	Q9BXX2	1392 aa		28.71	■■■□□ 2.19
RAP1B-208	ENST00000453560	ADGRF5	Q8IZF2	1346 aa		28.69	■■■□□ 2.18
RAP1B-208	ENST00000453560	ADGRL3	Q9HAR2	1447 aa		28.69	■■■□□ 2.18
RAP1B-208	ENST00000453560	HRC	P23327	699 aa		28.68	■■■□□ 2.18
RAP1B-208	ENST00000453560	COL16A1	Q07092	1604 aa	Predicted RBP	28.67	■■■□□ 2.18
RAP1B-208	ENST00000453560	PIK3C2G	O75747	1445 aa		28.66	■■■□□ 2.18
RAP1B-208	ENST00000453560	AHDC1	Q5TGY3	1603 aa	Predicted RBP	28.65	■■■□□ 2.18
RAP1B-208	ENST00000453560	ROBO2	Q9HCK4	1378 aa		28.64	■■■□□ 2.18
RAP1B-208	ENST00000453560	MST1R	Q04912	1400 aa		28.64	■■■□□ 2.18
RAP1B-208	ENST00000453560	ASXL1	Q8IXJ9	1541 aa		28.62	■■■□□ 2.17
RAP1B-208	ENST00000453560	MYOM2	P54296	1465 aa		28.6	■■■□□ 2.17
RAP1B-208	ENST00000453560	NRXN1	Q9ULB1	1477 aa		28.6	■■■□□ 2.17
RAP1B-208	ENST00000453560	KNDC1	Q76NI1	1749 aa		28.6	■■■□□ 2.17
RAP1B-208	ENST00000453560	BRINP3	Q76B58	766 aa		28.58	■■■□□ 2.17
RAP1B-208	ENST00000453560	LAMC1	P11047	1609 aa		28.58	■■■□□ 2.17
RAP1B-208	ENST00000453560	NHSL1	Q5SYE7	1610 aa		28.58	■■■□□ 2.17
RAP1B-208	ENST00000453560	TECPR2	O15040	1411 aa		28.57	■■■□□ 2.16
RAP1B-208	ENST00000453560	JCAD	Q9P266	1359 aa		28.55	■■■□□ 2.16
RAP1B-208	ENST00000453560	PHF23	Q9BUL5	403 aa	Predicted RBP	28.54	■■■□□ 2.16
RAP1B-208	ENST00000453560	SHPRH	Q149N8	1683 aa		28.53	■■■□□ 2.16
RAP1B-208	ENST00000453560	LRPPRC	P42704	1394 aa	Known RBP	28.52	■■■□□ 2.16
RAP1B-208	ENST00000453560	CDC42BPG	Q6DT37	1551 aa		28.5	■■■□□ 2.15
RAP1B-208	ENST00000453560	C1orf167	Q5SNV9	1468 aa		28.5	■■■□□ 2.15
RAP1B-208	ENST00000453560	ABCC11	Q96J66	1382 aa		28.5	■■■□□ 2.15
RAP1B-208	ENST00000453560	SOCS7	O14512	581 aa		28.48	■■■□□ 2.15
RAP1B-208	ENST00000453560	TMEM132E	Q6IEE7	984 aa		28.48	■■■□□ 2.15
RAP1B-208	ENST00000453560	C14orf93	Q9H972	538 aa	Known RBP	28.48	■■■□□ 2.15
RAP1B-208	ENST00000453560	YTHDC2	Q9H6S0	1430 aa	Known RBP	28.48	■■■□□ 2.15
RAP1B-208	ENST00000453560	STK26	Q9P289	416 aa		28.45	■■■□□ 2.14
RAP1B-208	ENST00000453560	RGS17	Q9UGC6	210 aa	Predicted RBP	28.44	■■■□□ 2.14
RAP1B-208	ENST00000453560	CFAP70	Q5T0N1	1121 aa		28.42	■■■□□ 2.14
RAP1B-208	ENST00000453560	SPATA31A6	Q5VVP1	1343 aa		28.42	■■■□□ 2.14
RAP1B-208	ENST00000453560	PLEKHH1	Q9ULM0	1364 aa		28.41	■■■□□ 2.14

Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms