RNA–Protein interactions for RNA: ENST00000427746.1

HLCS-204, Transcript of holocarboxylase synthetase, humanhuman

TSL 3

Gene HLCS, Length 666 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLCS-204ENST00000427746 PLEKHG1Q9ULL1 1385 aa29.21■■■□□ 2.27
HLCS-204ENST00000427746 CHGAP10645 457 aaKnown RBP29.2■■■□□ 2.26
HLCS-204ENST00000427746 HDGFP51858 240 aaKnown RBP29.19■■■□□ 2.26
HLCS-204ENST00000427746 KCNA6P17658 529 aa29.16■■■□□ 2.26
HLCS-204ENST00000427746 ABCF1Q8NE71 845 aaKnown RBP eCLIP29.16■■■□□ 2.26
HLCS-204ENST00000427746 PPP1R15AO75807 674 aaPredicted RBP29.14■■■□□ 2.26
HLCS-204ENST00000427746 XIRP1Q702N8 1843 aaKnown RBP29.13■■■□□ 2.25
HLCS-204ENST00000427746 PIP4K2BP78356 416 aa29.13■■■□□ 2.25
HLCS-204ENST00000427746 NWD1Q149M9 1564 aa29.13■■■□□ 2.25
HLCS-204ENST00000427746 TRPM2O94759 1503 aa29.12■■■□□ 2.25
HLCS-204ENST00000427746 BCANQ96GW7 911 aa29.12■■■□□ 2.25
HLCS-204ENST00000427746 TRIM52Q96A61 297 aa29.11■■■□□ 2.25
HLCS-204ENST00000427746 SCAF1Q9H7N4 1312 aaKnown RBP29.1■■■□□ 2.25
HLCS-204ENST00000427746 NUTM2DQ5VT03 806 aaPredicted RBP29.09■■■□□ 2.25
HLCS-204ENST00000427746 SENP3Q9H4L4 574 aaPredicted RBP29.09■■■□□ 2.25
HLCS-204ENST00000427746 CLTCL1P53675 1640 aa29.09■■■□□ 2.25
HLCS-204ENST00000427746 TBX22Q9Y458 520 aa29.08■■■□□ 2.25
HLCS-204ENST00000427746 ADAMTS13Q76LX8 1427 aa29.08■■■□□ 2.25
HLCS-204ENST00000427746 NKTRP30414 1462 aaKnown RBP29.08■■■□□ 2.25
HLCS-204ENST00000427746 TMEM94Q12767 1356 aa29.07■■■□□ 2.24
HLCS-204ENST00000427746 HSPA1LP34931 641 aa29.05■■■□□ 2.24
HLCS-204ENST00000427746 CHD2O14647 1828 aaKnown RBP29.04■■■□□ 2.24
HLCS-204ENST00000427746 SLC4A1APQ9BWU0 796 aaKnown RBP29.04■■■□□ 2.24
HLCS-204ENST00000427746 DIP2AQ14689 1571 aa29.04■■■□□ 2.24
HLCS-204ENST00000427746 PROSER2Q86WR7 435 aaPredicted RBP29.02■■■□□ 2.24
HLCS-204ENST00000427746 ZNF326Q5BKZ1 582 aaKnown RBP28.98■■■□□ 2.23
HLCS-204ENST00000427746 RBM33Q96EV2 1170 aaKnown RBP28.98■■■□□ 2.23
HLCS-204ENST00000427746 PIK3R4Q99570 1358 aa28.98■■■□□ 2.23
HLCS-204ENST00000427746 NEXMIFQ5QGS0 1516 aa28.97■■■□□ 2.23
HLCS-204ENST00000427746 NRXN3Q9Y4C0 1643 aa28.97■■■□□ 2.23
HLCS-204ENST00000427746 KIF1BO60333 1816 aa28.97■■■□□ 2.23
HLCS-204ENST00000427746 SETBP1Q9Y6X0 1596 aa28.96■■■□□ 2.23
HLCS-204ENST00000427746 DISP3Q9P2K9 1392 aa28.95■■■□□ 2.22
HLCS-204ENST00000427746 FOXD1Q16676 465 aa28.91■■■□□ 2.22
HLCS-204ENST00000427746 PTPRUQ92729 1446 aa28.9■■■□□ 2.22
HLCS-204ENST00000427746 MPHOSPH9Q99550 1183 aa28.9■■■□□ 2.22
HLCS-204ENST00000427746 SETD5Q9C0A6 1442 aa28.9■■■□□ 2.22
HLCS-204ENST00000427746 FAM135BQ49AJ0 1406 aa28.89■■■□□ 2.22
HLCS-204ENST00000427746 NCOA3Q9Y6Q9 1424 aa28.89■■■□□ 2.22
HLCS-204ENST00000427746 MSH6P52701 1360 aa28.88■■■□□ 2.21
HLCS-204ENST00000427746 ACIN1Q9UKV3 1341 aaKnown RBP28.87■■■□□ 2.21
HLCS-204ENST00000427746 AMOTL2Q9Y2J4 779 aa28.86■■■□□ 2.21
HLCS-204ENST00000427746 RPGRIP1LQ68CZ1 1315 aa28.84■■■□□ 2.21
HLCS-204ENST00000427746 METP08581 1390 aa28.84■■■□□ 2.21
HLCS-204ENST00000427746 XRN1Q8IZH2 1706 aaKnown RBP28.83■■■□□ 2.21
HLCS-204ENST00000427746 CCDC144AA2RUR9 1427 aa28.81■■■□□ 2.2
HLCS-204ENST00000427746 VGFO15240 615 aaPredicted RBP28.81■■■□□ 2.2
HLCS-204ENST00000427746 RAB3GAP2Q9H2M9 1393 aa28.8■■■□□ 2.2
HLCS-204ENST00000427746 ROBO1Q9Y6N7 1651 aa28.8■■■□□ 2.2
HLCS-204ENST00000427746 SLAIN2Q9P270 581 aa28.79■■■□□ 2.2
HLCS-204ENST00000427746 PPLO60437 1756 aa28.78■■■□□ 2.2
HLCS-204ENST00000427746 MED1Q15648 1581 aaPredicted RBP28.78■■■□□ 2.2
HLCS-204ENST00000427746 SPATA31E1Q6ZUB1 1445 aa28.77■■■□□ 2.2
HLCS-204ENST00000427746 ILDR2Q71H61 639 aa28.76■■■□□ 2.19
HLCS-204ENST00000427746 C19orf44Q9H6X5 657 aa28.76■■■□□ 2.19
HLCS-204ENST00000427746 SIPA1L2Q9P2F8 1722 aaPredicted RBP28.75■■■□□ 2.19
HLCS-204ENST00000427746 C14orf37Q86TY3 774 aa28.75■■■□□ 2.19
HLCS-204ENST00000427746 SETD1AO15047 1707 aaKnown RBP28.74■■■□□ 2.19
HLCS-204ENST00000427746 CADPS2Q86UW7 1296 aa28.71■■■□□ 2.19
HLCS-204ENST00000427746 DCCP43146 1447 aa28.69■■■□□ 2.18
HLCS-204ENST00000427746 ATF3P18847 181 aa28.68■■■□□ 2.18
HLCS-204ENST00000427746 IFT172Q9UG01 1749 aa28.67■■■□□ 2.18
HLCS-204ENST00000427746 RGL3Q3MIN7 710 aa28.67■■■□□ 2.18
HLCS-204ENST00000427746 PRAG1Q86YV5 1406 aa28.66■■■□□ 2.18
HLCS-204ENST00000427746 ADGRF5Q8IZF2 1346 aa28.66■■■□□ 2.18
HLCS-204ENST00000427746 ANKRD30BQ9BXX2 1392 aa28.65■■■□□ 2.18
HLCS-204ENST00000427746 PTCH1Q13635 1447 aa28.64■■■□□ 2.18
HLCS-204ENST00000427746 HRCP23327 699 aa28.64■■■□□ 2.18
HLCS-204ENST00000427746 ADGRL3Q9HAR2 1447 aa28.62■■■□□ 2.17
HLCS-204ENST00000427746 ROBO2Q9HCK4 1378 aa28.61■■■□□ 2.17
HLCS-204ENST00000427746 PHLPP1O60346 1717 aa28.6■■■□□ 2.17
HLCS-204ENST00000427746 NALCNQ8IZF0 1738 aa28.6■■■□□ 2.17
HLCS-204ENST00000427746 MST1RQ04912 1400 aa28.58■■■□□ 2.17
HLCS-204ENST00000427746 PIK3C2GO75747 1445 aa28.57■■■□□ 2.16
HLCS-204ENST00000427746 COL16A1Q07092 1604 aaPredicted RBP28.57■■■□□ 2.16
HLCS-204ENST00000427746 AHDC1Q5TGY3 1603 aaPredicted RBP28.56■■■□□ 2.16
HLCS-204ENST00000427746 BRINP3Q76B58 766 aa28.55■■■□□ 2.16
HLCS-204ENST00000427746 PHF23Q9BUL5 403 aaPredicted RBP28.52■■■□□ 2.16
HLCS-204ENST00000427746 ASXL1Q8IXJ9 1541 aa28.52■■■□□ 2.16
HLCS-204ENST00000427746 NRXN1Q9ULB1 1477 aa28.52■■■□□ 2.16
HLCS-204ENST00000427746 MYOM2P54296 1465 aa28.51■■■□□ 2.15
HLCS-204ENST00000427746 JCADQ9P266 1359 aa28.5■■■□□ 2.15
HLCS-204ENST00000427746 TECPR2O15040 1411 aa28.5■■■□□ 2.15
HLCS-204ENST00000427746 SOCS7O14512 581 aa28.49■■■□□ 2.15
HLCS-204ENST00000427746 LRPPRCP42704 1394 aaKnown RBP28.48■■■□□ 2.15
HLCS-204ENST00000427746 ABCC11Q96J66 1382 aa28.46■■■□□ 2.15
HLCS-204ENST00000427746 TMEM132EQ6IEE7 984 aa28.45■■■□□ 2.14
HLCS-204ENST00000427746 C14orf93Q9H972 538 aaKnown RBP28.45■■■□□ 2.14
HLCS-204ENST00000427746 C1orf167Q5SNV9 1468 aa28.45■■■□□ 2.14
HLCS-204ENST00000427746 NHSL1Q5SYE7 1610 aa28.44■■■□□ 2.14
HLCS-204ENST00000427746 RGS17Q9UGC6 210 aaPredicted RBP28.44■■■□□ 2.14
HLCS-204ENST00000427746 KNDC1Q76NI1 1749 aa28.43■■■□□ 2.14
HLCS-204ENST00000427746 STK26Q9P289 416 aa28.43■■■□□ 2.14
HLCS-204ENST00000427746 YTHDC2Q9H6S0 1430 aaKnown RBP28.42■■■□□ 2.14
HLCS-204ENST00000427746 LAMC1P11047 1609 aa28.41■■■□□ 2.14
HLCS-204ENST00000427746 SHPRHQ149N8 1683 aa28.4■■■□□ 2.14
HLCS-204ENST00000427746 CFAP70Q5T0N1 1121 aa28.39■■■□□ 2.14
HLCS-204ENST00000427746 CDC42BPGQ6DT37 1551 aa28.39■■■□□ 2.14
HLCS-204ENST00000427746 WAPLQ7Z5K2 1190 aa28.38■■■□□ 2.13
HLCS-204ENST00000427746 SPATA31A6Q5VVP1 1343 aa28.38■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms