RNA–Protein interactions for RNA: ENST00000399079.7

HLA-DQB1-202, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,501 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-202ENST00000399079 RIMS2Q9UQ26 1411 aa20.98■□□□□ 0.95
HLA-DQB1-202ENST00000399079 TRPM2O94759 1503 aa20.97■□□□□ 0.95
HLA-DQB1-202ENST00000399079 CLTCL1P53675 1640 aa20.96■□□□□ 0.95
HLA-DQB1-202ENST00000399079 PPP1R15AO75807 674 aaPredicted RBP20.95■□□□□ 0.94
HLA-DQB1-202ENST00000399079 SLC26A8Q96RN1 970 aa20.95■□□□□ 0.94
HLA-DQB1-202ENST00000399079 BCANQ96GW7 911 aa20.94■□□□□ 0.94
HLA-DQB1-202ENST00000399079 HDGFP51858 240 aaKnown RBP20.94■□□□□ 0.94
HLA-DQB1-202ENST00000399079 ZNF326Q5BKZ1 582 aaKnown RBP20.93■□□□□ 0.94
HLA-DQB1-202ENST00000399079 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.92■□□□□ 0.94
HLA-DQB1-202ENST00000399079 ACIN1Q9UKV3 1341 aaKnown RBP20.9■□□□□ 0.94
HLA-DQB1-202ENST00000399079 PLEKHG1Q9ULL1 1385 aa20.9■□□□□ 0.94
HLA-DQB1-202ENST00000399079 STRCP1A6NGW2 1772 aa20.89■□□□□ 0.94
HLA-DQB1-202ENST00000399079 CPS1P31327 1500 aa20.89■□□□□ 0.93
HLA-DQB1-202ENST00000399079 IQSEC2Q5JU85 1478 aa20.86■□□□□ 0.93
HLA-DQB1-202ENST00000399079 KIF1BO60333 1816 aa20.85■□□□□ 0.93
HLA-DQB1-202ENST00000399079 CCDC144AA2RUR9 1427 aa20.85■□□□□ 0.93
HLA-DQB1-202ENST00000399079 HRCP23327 699 aa20.84■□□□□ 0.93
HLA-DQB1-202ENST00000399079 LRRC7Q96NW7 1537 aa20.83■□□□□ 0.93
HLA-DQB1-202ENST00000399079 ADAMTS13Q76LX8 1427 aa20.83■□□□□ 0.92
HLA-DQB1-202ENST00000399079 KCNA6P17658 529 aa20.82■□□□□ 0.92
HLA-DQB1-202ENST00000399079 NEXMIFQ5QGS0 1516 aa20.82■□□□□ 0.92
HLA-DQB1-202ENST00000399079 UBAP1LF5GYI3 381 aa20.81■□□□□ 0.92
HLA-DQB1-202ENST00000399079 TBX22Q9Y458 520 aa20.81■□□□□ 0.92
HLA-DQB1-202ENST00000399079 RGL3Q3MIN7 710 aa20.8■□□□□ 0.92
HLA-DQB1-202ENST00000399079 RBM33Q96EV2 1170 aaKnown RBP20.78■□□□□ 0.92
HLA-DQB1-202ENST00000399079 SPATA31E1Q6ZUB1 1445 aa20.77■□□□□ 0.91
HLA-DQB1-202ENST00000399079 NRXN3Q9Y4C0 1643 aa20.76■□□□□ 0.91
HLA-DQB1-202ENST00000399079 VGFO15240 615 aaPredicted RBP20.76■□□□□ 0.91
HLA-DQB1-202ENST00000399079 RPGRIP1LQ68CZ1 1315 aa20.76■□□□□ 0.91
HLA-DQB1-202ENST00000399079 PROSER2Q86WR7 435 aaPredicted RBP20.75■□□□□ 0.91
HLA-DQB1-202ENST00000399079 TMEM94Q12767 1356 aa20.75■□□□□ 0.91
HLA-DQB1-202ENST00000399079 ANKRD30BQ9BXX2 1392 aa20.75■□□□□ 0.91
HLA-DQB1-202ENST00000399079 SETBP1Q9Y6X0 1596 aa20.74■□□□□ 0.91
HLA-DQB1-202ENST00000399079 DIP2AQ14689 1571 aa20.74■□□□□ 0.91
HLA-DQB1-202ENST00000399079 NWD1Q149M9 1564 aa20.74■□□□□ 0.91
HLA-DQB1-202ENST00000399079 CHD2O14647 1828 aaKnown RBP20.73■□□□□ 0.91
HLA-DQB1-202ENST00000399079 TOM1O60784 492 aa20.72■□□□□ 0.91
HLA-DQB1-202ENST00000399079 PIP4K2BP78356 416 aa20.72■□□□□ 0.91
HLA-DQB1-202ENST00000399079 METP08581 1390 aa20.72■□□□□ 0.91
HLA-DQB1-202ENST00000399079 PTPRUQ92729 1446 aa20.71■□□□□ 0.91
HLA-DQB1-202ENST00000399079 NKTRP30414 1462 aaKnown RBP20.71■□□□□ 0.91
HLA-DQB1-202ENST00000399079 XIRP1Q702N8 1843 aaKnown RBP20.71■□□□□ 0.91
HLA-DQB1-202ENST00000399079 AMOTL2Q9Y2J4 779 aa20.71■□□□□ 0.91
HLA-DQB1-202ENST00000399079 PPLO60437 1756 aa20.71■□□□□ 0.91
HLA-DQB1-202ENST00000399079 SCAF1Q9H7N4 1312 aaKnown RBP20.7■□□□□ 0.9
HLA-DQB1-202ENST00000399079 PIK3R4Q99570 1358 aa20.7■□□□□ 0.9
HLA-DQB1-202ENST00000399079 TRIM26Q12899 539 aaPredicted RBP20.69■□□□□ 0.9
HLA-DQB1-202ENST00000399079 ADGRF5Q8IZF2 1346 aa20.69■□□□□ 0.9
HLA-DQB1-202ENST00000399079 ALKQ9UM73 1620 aa20.69■□□□□ 0.9
HLA-DQB1-202ENST00000399079 IFT172Q9UG01 1749 aa20.63■□□□□ 0.89
HLA-DQB1-202ENST00000399079 SETD1AO15047 1707 aaKnown RBP20.62■□□□□ 0.89
HLA-DQB1-202ENST00000399079 C14orf37Q86TY3 774 aa20.61■□□□□ 0.89
HLA-DQB1-202ENST00000399079 XRN1Q8IZH2 1706 aaKnown RBP20.61■□□□□ 0.89
HLA-DQB1-202ENST00000399079 MSH6P52701 1360 aa20.6■□□□□ 0.89
HLA-DQB1-202ENST00000399079 PIK3C2GO75747 1445 aa20.59■□□□□ 0.89
HLA-DQB1-202ENST00000399079 HSPA1LP34931 641 aa20.58■□□□□ 0.88
HLA-DQB1-202ENST00000399079 DCAF11Q8TEB1 546 aa20.57■□□□□ 0.88
HLA-DQB1-202ENST00000399079 KDM2AQ9Y2K7 1162 aa20.57■□□□□ 0.88
HLA-DQB1-202ENST00000399079 NCOA3Q9Y6Q9 1424 aa20.56■□□□□ 0.88
HLA-DQB1-202ENST00000399079 TMEM132EQ6IEE7 984 aa20.56■□□□□ 0.88
HLA-DQB1-202ENST00000399079 MYOM2P54296 1465 aa20.55■□□□□ 0.88
HLA-DQB1-202ENST00000399079 C19orf44Q9H6X5 657 aa20.55■□□□□ 0.88
HLA-DQB1-202ENST00000399079 NRXN1Q9ULB1 1477 aa20.55■□□□□ 0.88
HLA-DQB1-202ENST00000399079 ROBO2Q9HCK4 1378 aa20.54■□□□□ 0.88
HLA-DQB1-202ENST00000399079 DHX57Q6P158 1386 aaKnown RBP20.54■□□□□ 0.88
HLA-DQB1-202ENST00000399079 CFAP70Q5T0N1 1121 aa20.53■□□□□ 0.88
HLA-DQB1-202ENST00000399079 SLAIN2Q9P270 581 aa20.53■□□□□ 0.88
HLA-DQB1-202ENST00000399079 STK26Q9P289 416 aa20.53■□□□□ 0.88
HLA-DQB1-202ENST00000399079 C14orf93Q9H972 538 aaKnown RBP20.53■□□□□ 0.88
HLA-DQB1-202ENST00000399079 ASXL1Q8IXJ9 1541 aa20.52■□□□□ 0.87
HLA-DQB1-202ENST00000399079 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.51■□□□□ 0.87
HLA-DQB1-202ENST00000399079 ATF3P18847 181 aa20.51■□□□□ 0.87
HLA-DQB1-202ENST00000399079 PTCH1Q13635 1447 aa20.5■□□□□ 0.87
HLA-DQB1-202ENST00000399079 SIN3AQ96ST3 1273 aa20.5■□□□□ 0.87
HLA-DQB1-202ENST00000399079 FAM135BQ49AJ0 1406 aa20.5■□□□□ 0.87
HLA-DQB1-202ENST00000399079 CADPS2Q86UW7 1296 aa20.49■□□□□ 0.87
HLA-DQB1-202ENST00000399079 PRAG1Q86YV5 1406 aa20.48■□□□□ 0.87
HLA-DQB1-202ENST00000399079 LRPPRCP42704 1394 aaKnown RBP20.47■□□□□ 0.87
HLA-DQB1-202ENST00000399079 ADGRL3Q9HAR2 1447 aa20.47■□□□□ 0.87
HLA-DQB1-202ENST00000399079 YTHDC2Q9H6S0 1430 aaKnown RBP20.47■□□□□ 0.87
HLA-DQB1-202ENST00000399079 ROBO1Q9Y6N7 1651 aa20.47■□□□□ 0.87
HLA-DQB1-202ENST00000399079 ABCC11Q96J66 1382 aa20.46■□□□□ 0.87
HLA-DQB1-202ENST00000399079 WAPLQ7Z5K2 1190 aa20.46■□□□□ 0.87
HLA-DQB1-202ENST00000399079 NALCNQ8IZF0 1738 aa20.45■□□□□ 0.86
HLA-DQB1-202ENST00000399079 NEUROD1Q13562 356 aa20.45■□□□□ 0.86
HLA-DQB1-202ENST00000399079 STAC3Q96MF2 364 aa20.45■□□□□ 0.86
HLA-DQB1-202ENST00000399079 TECPR2O15040 1411 aa20.44■□□□□ 0.86
HLA-DQB1-202ENST00000399079 DCCP43146 1447 aa20.44■□□□□ 0.86
HLA-DQB1-202ENST00000399079 PLEKHH1Q9ULM0 1364 aa20.43■□□□□ 0.86
HLA-DQB1-202ENST00000399079 LAMC1P11047 1609 aa20.43■□□□□ 0.86
HLA-DQB1-202ENST00000399079 PCGF6Q9BYE7 350 aa20.42■□□□□ 0.86
HLA-DQB1-202ENST00000399079 L3MBTL2Q969R5 705 aa20.41■□□□□ 0.86
HLA-DQB1-202ENST00000399079 MST1RQ04912 1400 aa20.41■□□□□ 0.86
HLA-DQB1-202ENST00000399079 ADGRB1O14514 1584 aa20.4■□□□□ 0.86
HLA-DQB1-202ENST00000399079 BRINP3Q76B58 766 aa20.39■□□□□ 0.85
HLA-DQB1-202ENST00000399079 KNDC1Q76NI1 1749 aa20.38■□□□□ 0.85
HLA-DQB1-202ENST00000399079 SAFB2Q14151 953 aaKnown RBP eCLIP20.37■□□□□ 0.85
HLA-DQB1-202ENST00000399079 PHF23Q9BUL5 403 aaPredicted RBP20.37■□□□□ 0.85
HLA-DQB1-202ENST00000399079 TRAK1Q9UPV9 953 aa20.37■□□□□ 0.85
HLA-DQB1-202ENST00000399079 PRAM1Q96QH2 718 aa20.37■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms