RNA–Protein interactions for RNA: ENST00000395548.6

AP3S1-202, Transcript of adaptor related protein complex 3 subunit sigma 1, humanhuman

TSL 1 (best)

Gene AP3S1, Length 1,180 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1-202ENST00000395548 FAM198AQ9UFP1 575 aa10.85□□□□□ -0.67
AP3S1-202ENST00000395548 PNMA3Q9UL41 463 aa10.85□□□□□ -0.67
AP3S1-202ENST00000395548 PEG3Q9GZU2 1588 aa10.85□□□□□ -0.67
AP3S1-202ENST00000395548 NUTM2FA1L443 756 aa10.84□□□□□ -0.67
AP3S1-202ENST00000395548 PLA2G2EQ9NZK7 142 aa10.84□□□□□ -0.67
AP3S1-202ENST00000395548 IFT140Q96RY7 1462 aa10.83□□□□□ -0.68
AP3S1-202ENST00000395548 PADI6Q6TGC4 694 aa10.83□□□□□ -0.68
AP3S1-202ENST00000395548 TTC13Q8NBP0 860 aa10.83□□□□□ -0.68
AP3S1-202ENST00000395548 LRCH3Q96II8 777 aa10.83□□□□□ -0.68
AP3S1-202ENST00000395548 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.83□□□□□ -0.68
AP3S1-202ENST00000395548 SMAPO00193 183 aa10.82□□□□□ -0.68
AP3S1-202ENST00000395548 BCAMP50895 628 aa10.82□□□□□ -0.68
AP3S1-202ENST00000395548 PTGDRQ13258 359 aa10.82□□□□□ -0.68
AP3S1-202ENST00000395548 ZNF608Q9ULD9 1512 aaPredicted RBP10.81□□□□□ -0.68
AP3S1-202ENST00000395548 HDGFP51858 240 aaKnown RBP10.81□□□□□ -0.68
AP3S1-202ENST00000395548 NYAP1Q6ZVC0 841 aa10.81□□□□□ -0.68
AP3S1-202ENST00000395548 NUDT18Q6ZVK8 323 aa10.81□□□□□ -0.68
AP3S1-202ENST00000395548 URB2Q14146 1524 aaKnown RBP10.8□□□□□ -0.68
AP3S1-202ENST00000395548 FCHSD2O94868 740 aa10.79□□□□□ -0.68
AP3S1-202ENST00000395548 TSR3Q9UJK0 312 aaKnown RBP10.79□□□□□ -0.68
AP3S1-202ENST00000395548 C3orf80F5H4A9 247 aa10.77□□□□□ -0.69
AP3S1-202ENST00000395548 SAMD7Q7Z3H4 446 aa10.76□□□□□ -0.69
AP3S1-202ENST00000395548 WBP1LQ9NX94 342 aa10.76□□□□□ -0.69
AP3S1-202ENST00000395548 HPS5Q9UPZ3 1129 aa10.76□□□□□ -0.69
AP3S1-202ENST00000395548 CHD1O14646 1710 aa10.75□□□□□ -0.69
AP3S1-202ENST00000395548 PPP4CP60510 307 aa10.75□□□□□ -0.69
AP3S1-202ENST00000395548 TULP1O00294 542 aaPredicted RBP10.74□□□□□ -0.69
AP3S1-202ENST00000395548 RBM26Q5T8P6 1007 aaKnown RBP10.74□□□□□ -0.69
AP3S1-202ENST00000395548 ILDR2Q71H61 639 aa10.74□□□□□ -0.69
AP3S1-202ENST00000395548 EYA1Q99502 592 aa10.73□□□□□ -0.69
AP3S1-202ENST00000395548 HECW2Q9P2P5 1572 aa10.73□□□□□ -0.69
AP3S1-202ENST00000395548 SLC4A3P48751 1232 aa10.72□□□□□ -0.69
AP3S1-202ENST00000395548 HIC1Q14526 733 aa10.72□□□□□ -0.69
AP3S1-202ENST00000395548 RBM46Q8TBY0 533 aaKnown RBP10.72□□□□□ -0.69
AP3S1-202ENST00000395548 IFFO2Q5TF58 517 aa10.71□□□□□ -0.69
AP3S1-202ENST00000395548 DISP3Q9P2K9 1392 aa10.7□□□□□ -0.7
AP3S1-202ENST00000395548 NECTIN2Q92692 538 aa10.7□□□□□ -0.7
AP3S1-202ENST00000395548 ADGRG1Q9Y653 693 aa10.7□□□□□ -0.7
AP3S1-202ENST00000395548 EIF4G3O43432 1585 aaKnown RBP10.69□□□□□ -0.7
AP3S1-202ENST00000395548 GAPVD1Q14C86 1478 aa10.69□□□□□ -0.7
AP3S1-202ENST00000395548 SLF2Q8IX21 1173 aa10.69□□□□□ -0.7
AP3S1-202ENST00000395548 CFTRP13569 1480 aa10.68□□□□□ -0.7
AP3S1-202ENST00000395548 RNF40O75150 1001 aa10.68□□□□□ -0.7
AP3S1-202ENST00000395548 SWT1Q5T5J6 900 aaKnown RBP10.68□□□□□ -0.7
AP3S1-202ENST00000395548 GNPATO15228 680 aa10.67□□□□□ -0.7
AP3S1-202ENST00000395548 OATP04181 439 aa10.67□□□□□ -0.7
AP3S1-202ENST00000395548 DNAJB2P25686 324 aa10.67□□□□□ -0.7
AP3S1-202ENST00000395548 CLASP1Q7Z460 1538 aa10.67□□□□□ -0.7
AP3S1-202ENST00000395548 ITGBL1O95965 494 aaPredicted RBP10.66□□□□□ -0.7
AP3S1-202ENST00000395548 GPIHBP1Q8IV16 184 aa10.66□□□□□ -0.7
AP3S1-202ENST00000395548 SYNJ2O15056 1496 aa10.65□□□□□ -0.7
AP3S1-202ENST00000395548 SYNJ1O43426 1573 aa10.64□□□□□ -0.71
AP3S1-202ENST00000395548 AQRO60306 1485 aaKnown RBP eCLIP10.63□□□□□ -0.71
AP3S1-202ENST00000395548 RCCD1A6NED2 376 aa10.63□□□□□ -0.71
AP3S1-202ENST00000395548 KCNC4Q03721 635 aa10.63□□□□□ -0.71
AP3S1-202ENST00000395548 FAM161AQ3B820 660 aa10.63□□□□□ -0.71
AP3S1-202ENST00000395548 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.62□□□□□ -0.71
AP3S1-202ENST00000395548 GPR37O15354 613 aa10.62□□□□□ -0.71
AP3S1-202ENST00000395548 CHMP7Q8WUX9 453 aaPredicted RBP10.62□□□□□ -0.71
AP3S1-202ENST00000395548 TMEM134Q9H6X4 195 aa10.62□□□□□ -0.71
AP3S1-202ENST00000395548 PXYLP1Q8TE99 480 aa10.6□□□□□ -0.71
AP3S1-202ENST00000395548 MROH2BQ7Z745 1585 aa10.6□□□□□ -0.71
AP3S1-202ENST00000395548 KDM6BO15054 1643 aa10.59□□□□□ -0.71
AP3S1-202ENST00000395548 FAM69CQ0P6D2 419 aa10.59□□□□□ -0.71
AP3S1-202ENST00000395548 PRR14Q9BWN1 585 aa10.59□□□□□ -0.71
AP3S1-202ENST00000395548 ADGRL1O94910 1474 aa10.59□□□□□ -0.71
AP3S1-202ENST00000395548 KIF13AQ9H1H9 1805 aa10.58□□□□□ -0.72
AP3S1-202ENST00000395548 A0A0G2JS52 829 aa10.58□□□□□ -0.72
AP3S1-202ENST00000395548 FECHP22830 423 aa10.58□□□□□ -0.72
AP3S1-202ENST00000395548 METTL3Q86U44 580 aaKnown RBP10.58□□□□□ -0.72
AP3S1-202ENST00000395548 APLP1P51693 650 aa10.57□□□□□ -0.72
AP3S1-202ENST00000395548 ABCC8Q09428 1581 aa10.56□□□□□ -0.72
AP3S1-202ENST00000395548 RGS20O76081 388 aa10.56□□□□□ -0.72
AP3S1-202ENST00000395548 TJAP1Q5JTD0 557 aa10.55□□□□□ -0.72
AP3S1-202ENST00000395548 RSPH4AQ5TD94 716 aa10.55□□□□□ -0.72
AP3S1-202ENST00000395548 MTRQ99707 1265 aa10.55□□□□□ -0.72
AP3S1-202ENST00000395548 IL21Q9HBE4 155 aa10.55□□□□□ -0.72
AP3S1-202ENST00000395548 TOPBP1Q92547 1522 aa10.54□□□□□ -0.72
AP3S1-202ENST00000395548 KMT5BQ4FZB7 885 aa10.53□□□□□ -0.72
AP3S1-202ENST00000395548 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.53□□□□□ -0.72
AP3S1-202ENST00000395548 ABCC10Q5T3U5 1492 aa10.52□□□□□ -0.73
AP3S1-202ENST00000395548 DAXXQ9UER7 740 aaPredicted RBP10.51□□□□□ -0.73
AP3S1-202ENST00000395548 MAP2K5Q13163 448 aa10.5□□□□□ -0.73
AP3S1-202ENST00000395548 SNAPC4Q5SXM2 1469 aa10.49□□□□□ -0.73
AP3S1-202ENST00000395548 PCDHB3Q9Y5E6 796 aa10.49□□□□□ -0.73
AP3S1-202ENST00000395548 TARBP1Q13395 1621 aaKnown RBP10.48□□□□□ -0.73
AP3S1-202ENST00000395548 CFHP08603 1231 aa10.48□□□□□ -0.73
AP3S1-202ENST00000395548 SLC10A3P09131 477 aa10.48□□□□□ -0.73
AP3S1-202ENST00000395548 COPS2P61201 443 aa10.48□□□□□ -0.73
AP3S1-202ENST00000395548 MINK1Q8N4C8 1332 aaPredicted RBP10.48□□□□□ -0.73
AP3S1-202ENST00000395548 MAGI1Q96QZ7 1491 aaPredicted RBP10.48□□□□□ -0.73
AP3S1-202ENST00000395548 ACTN4O43707 911 aaKnown RBP10.47□□□□□ -0.73
AP3S1-202ENST00000395548 LMOD2Q6P5Q4 547 aa10.47□□□□□ -0.73
AP3S1-202ENST00000395548 IRF6O14896 467 aa10.46□□□□□ -0.73
AP3S1-202ENST00000395548 SULF1Q8IWU6 871 aa10.46□□□□□ -0.73
AP3S1-202ENST00000395548 ZNF516Q92618 1163 aa10.46□□□□□ -0.73
AP3S1-202ENST00000395548 ZPR1O75312 459 aa10.44□□□□□ -0.74
AP3S1-202ENST00000395548 RDH13Q8NBN7 331 aa10.44□□□□□ -0.74
AP3S1-202ENST00000395548 PHOX2BQ99453 314 aa10.44□□□□□ -0.74
AP3S1-202ENST00000395548 SPATA31D1Q6ZQQ2 1576 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms