RNA–Protein interactions for RNA: ENST00000394686.3

SGMS2-203, Transcript of sphingomyelin synthase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGMS2, Length 2,127 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS2-203ENST00000394686 CHMP4AQ9BY43 222 aa8.99□□□□□ -0.97
SGMS2-203ENST00000394686 FAM161AQ3B820 660 aa8.98□□□□□ -0.97
SGMS2-203ENST00000394686 AKT1S1Q96B36 256 aa8.98□□□□□ -0.97
SGMS2-203ENST00000394686 PPP4R2Q9NY27 417 aa8.98□□□□□ -0.97
SGMS2-203ENST00000394686 CUX1P39880 1505 aa8.98□□□□□ -0.97
SGMS2-203ENST00000394686 PPP1R15AO75807 674 aaPredicted RBP8.98□□□□□ -0.97
SGMS2-203ENST00000394686 ABL2P42684 1182 aa8.98□□□□□ -0.97
SGMS2-203ENST00000394686 FGD5Q6ZNL6 1462 aa8.97□□□□□ -0.97
SGMS2-203ENST00000394686 CLIP1P30622 1438 aa8.97□□□□□ -0.97
SGMS2-203ENST00000394686 C11orf95C9JLR9 678 aaPredicted RBP8.97□□□□□ -0.97
SGMS2-203ENST00000394686 RFC5P40937 340 aa8.97□□□□□ -0.97
SGMS2-203ENST00000394686 MYSM1Q5VVJ2 828 aa8.97□□□□□ -0.97
SGMS2-203ENST00000394686 KIF12Q96FN5 646 aa8.97□□□□□ -0.97
SGMS2-203ENST00000394686 FARP1Q9Y4F1 1045 aaPredicted RBP8.97□□□□□ -0.97
SGMS2-203ENST00000394686 TOP2BQ02880 1626 aa8.97□□□□□ -0.97
SGMS2-203ENST00000394686 BRD1O95696 1058 aa8.96□□□□□ -0.97
SGMS2-203ENST00000394686 KCNH8Q96L42 1107 aa8.96□□□□□ -0.97
SGMS2-203ENST00000394686 PBRM1Q86U86 1689 aa8.96□□□□□ -0.97
SGMS2-203ENST00000394686 FAM177A1Q8N128 213 aaPredicted RBP8.96□□□□□ -0.98
SGMS2-203ENST00000394686 ADAMTS19Q8TE59 1207 aa8.96□□□□□ -0.98
SGMS2-203ENST00000394686 UPF1Q92900 1129 aaKnown RBP eCLIP8.95□□□□□ -0.98
SGMS2-203ENST00000394686 TBC1D2BQ9UPU7 963 aa8.95□□□□□ -0.98
SGMS2-203ENST00000394686 CHD1O14646 1710 aa8.95□□□□□ -0.98
SGMS2-203ENST00000394686 SOGA1O94964 1423 aa8.95□□□□□ -0.98
SGMS2-203ENST00000394686 ANP32CO43423 234 aa8.95□□□□□ -0.98
SGMS2-203ENST00000394686 TBC1D12O60347 775 aa8.95□□□□□ -0.98
SGMS2-203ENST00000394686 CDHR5Q9HBB8 845 aa8.94□□□□□ -0.98
SGMS2-203ENST00000394686 GPCPD1Q9NPB8 672 aa8.94□□□□□ -0.98
SGMS2-203ENST00000394686 ZNF608Q9ULD9 1512 aaPredicted RBP8.94□□□□□ -0.98
SGMS2-203ENST00000394686 RRBP1Q9P2E9 1410 aaKnown RBP8.94□□□□□ -0.98
SGMS2-203ENST00000394686 KCNA1Q09470 495 aa8.93□□□□□ -0.98
SGMS2-203ENST00000394686 WASHC2AQ641Q2 1341 aa8.93□□□□□ -0.98
SGMS2-203ENST00000394686 DPY19L2Q6NUT2 758 aa8.92□□□□□ -0.98
SGMS2-203ENST00000394686 PBXIP1Q96AQ6 731 aa8.92□□□□□ -0.98
SGMS2-203ENST00000394686 TRPC6Q9Y210 931 aa8.92□□□□□ -0.98
SGMS2-203ENST00000394686 ABCA5Q8WWZ7 1642 aa8.92□□□□□ -0.98
SGMS2-203ENST00000394686 AMOTL2Q9Y2J4 779 aa8.92□□□□□ -0.98
SGMS2-203ENST00000394686 ABCA10Q8WWZ4 1543 aa8.91□□□□□ -0.98
SGMS2-203ENST00000394686 MAGI1Q96QZ7 1491 aaPredicted RBP8.91□□□□□ -0.98
SGMS2-203ENST00000394686 HMGB1P09429 215 aaKnown RBP8.91□□□□□ -0.98
SGMS2-203ENST00000394686 CLCN1P35523 988 aa8.91□□□□□ -0.98
SGMS2-203ENST00000394686 MAP3K9P80192 1104 aa8.91□□□□□ -0.98
SGMS2-203ENST00000394686 CFAP70Q5T0N1 1121 aa8.91□□□□□ -0.98
SGMS2-203ENST00000394686 SND1Q7KZF4 910 aaKnown RBP eCLIP8.91□□□□□ -0.98
SGMS2-203ENST00000394686 PLPP6Q8IY26 295 aa8.91□□□□□ -0.98
SGMS2-203ENST00000394686 LIMD1Q9UGP4 676 aa8.91□□□□□ -0.98
SGMS2-203ENST00000394686 IPO9Q96P70 1041 aaKnown RBP8.9□□□□□ -0.98
SGMS2-203ENST00000394686 SYNJ1O43426 1573 aa8.9□□□□□ -0.98
SGMS2-203ENST00000394686 ANP32AP39687 249 aaKnown RBP8.9□□□□□ -0.99
SGMS2-203ENST00000394686 CLK2P49760 499 aaKnown RBP8.9□□□□□ -0.99
SGMS2-203ENST00000394686 SRPK2P78362 688 aaKnown RBP8.9□□□□□ -0.99
SGMS2-203ENST00000394686 FOXK1P85037 733 aa8.9□□□□□ -0.99
SGMS2-203ENST00000394686 CCDC136Q96JN2 1154 aa8.9□□□□□ -0.99
SGMS2-203ENST00000394686 WASHC2CQ9Y4E1 1318 aa8.9□□□□□ -0.99
SGMS2-203ENST00000394686 RAD54L2Q9Y4B4 1467 aa8.89□□□□□ -0.99
SGMS2-203ENST00000394686 GRIN2BQ13224 1484 aa8.89□□□□□ -0.99
SGMS2-203ENST00000394686 DDX10Q13206 875 aaKnown RBP8.89□□□□□ -0.99
SGMS2-203ENST00000394686 CDCA8Q53HL2 280 aa8.89□□□□□ -0.99
SGMS2-203ENST00000394686 FAM217BQ9NTX9 383 aaPredicted RBP8.89□□□□□ -0.99
SGMS2-203ENST00000394686 GOLGA2Q08379 1002 aa8.88□□□□□ -0.99
SGMS2-203ENST00000394686 HDGFL1Q5TGJ6 251 aa8.88□□□□□ -0.99
SGMS2-203ENST00000394686 TRIM52Q96A61 297 aa8.88□□□□□ -0.99
SGMS2-203ENST00000394686 NPDC1Q9NQX5 325 aaPredicted RBP8.88□□□□□ -0.99
SGMS2-203ENST00000394686 IGSF5Q9NSI5 407 aa8.88□□□□□ -0.99
SGMS2-203ENST00000394686 KIAA1522Q9P206 1035 aaPredicted RBP8.88□□□□□ -0.99
SGMS2-203ENST00000394686 AQRO60306 1485 aaKnown RBP eCLIP8.88□□□□□ -0.99
SGMS2-203ENST00000394686 GAPVD1Q14C86 1478 aa8.87□□□□□ -0.99
SGMS2-203ENST00000394686 TMEM106CQ9BVX2 250 aa8.87□□□□□ -0.99
SGMS2-203ENST00000394686 CSB-PGBD3P0DP91 1061 aa8.86□□□□□ -0.99
SGMS2-203ENST00000394686 GLIPR1L2Q4G1C9 344 aa8.86□□□□□ -0.99
SGMS2-203ENST00000394686 PKNOX2Q96KN3 472 aa8.86□□□□□ -0.99
SGMS2-203ENST00000394686 MAPKBP1O60336 1514 aa8.86□□□□□ -0.99
SGMS2-203ENST00000394686 SNAPC4Q5SXM2 1469 aa8.86□□□□□ -0.99
SGMS2-203ENST00000394686 RSPH4AQ5TD94 716 aa8.86□□□□□ -0.99
SGMS2-203ENST00000394686 PAK3O75914 559 aaPredicted RBP8.85□□□□□ -0.99
SGMS2-203ENST00000394686 CSPP1Q1MSJ5 1256 aa8.85□□□□□ -0.99
SGMS2-203ENST00000394686 TBC1D2Q9BYX2 928 aa8.85□□□□□ -0.99
SGMS2-203ENST00000394686 RUSC2Q8N2Y8 1516 aa8.85□□□□□ -0.99
SGMS2-203ENST00000394686 SYNJ2O15056 1496 aa8.85□□□□□ -0.99
SGMS2-203ENST00000394686 C2orf72A6NCS6 295 aa8.84□□□□□ -0.99
SGMS2-203ENST00000394686 BANK1Q8NDB2 785 aa8.84□□□□□ -0.99
SGMS2-203ENST00000394686 ERICH3Q5RHP9 1530 aa8.84□□□□□ -0.99
SGMS2-203ENST00000394686 TMC2Q8TDI7 906 aa8.84□□□□□ -0.99
SGMS2-203ENST00000394686 USTQ9Y2C2 406 aa8.84□□□□□ -0.99
SGMS2-203ENST00000394686 TDRD9Q8NDG6 1382 aaKnown RBP8.84□□□□□ -1
SGMS2-203ENST00000394686 PPM1GO15355 546 aaPredicted RBP8.83□□□□□ -1
SGMS2-203ENST00000394686 ADAMTS12P58397 1594 aa8.83□□□□□ -1
SGMS2-203ENST00000394686 TMEM88BA6NKF7 163 aa8.83□□□□□ -1
SGMS2-203ENST00000394686 PATL2C9JE40 543 aaKnown RBP8.82□□□□□ -1
SGMS2-203ENST00000394686 QPCTQ16769 361 aa8.82□□□□□ -1
SGMS2-203ENST00000394686 RIMBP3CA6NJZ7 1639 aa8.81□□□□□ -1
SGMS2-203ENST00000394686 RIMBP3BA6NNM3 1639 aa8.81□□□□□ -1
SGMS2-203ENST00000394686 CCNB3Q8WWL7 1395 aa8.81□□□□□ -1
SGMS2-203ENST00000394686 RIMBP3Q9UFD9 1639 aa8.81□□□□□ -1
SGMS2-203ENST00000394686 CUL7Q14999 1698 aa8.81□□□□□ -1
SGMS2-203ENST00000394686 MICALL2Q8IY33 904 aa8.81□□□□□ -1
SGMS2-203ENST00000394686 TXNDC2Q86VQ3 553 aa8.8□□□□□ -1
SGMS2-203ENST00000394686 MRRFQ96E11 262 aaKnown RBP8.8□□□□□ -1
SGMS2-203ENST00000394686 PHF12Q96QT6 1004 aa8.8□□□□□ -1
SGMS2-203ENST00000394686 VRTNQ9H8Y1 702 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms