RNA–Protein interactions for RNA: ENST00000391200.1

SNORA40.18-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 128 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.18-201ENST00000391200 TRIM47Q96LD4 638 aa3.53□□□□□ -1.84
SNORA40.18-201ENST00000391200 MFRPQ9BY79 579 aa3.53□□□□□ -1.84
SNORA40.18-201ENST00000391200 NXF1Q9UBU9 619 aaKnown RBP3.53□□□□□ -1.84
SNORA40.18-201ENST00000391200 FOXC1Q12948 553 aa3.52□□□□□ -1.85
SNORA40.18-201ENST00000391200 CSRNP3Q8WYN3 585 aa3.52□□□□□ -1.85
SNORA40.18-201ENST00000391200 CADPSQ9ULU8 1353 aa3.51□□□□□ -1.85
SNORA40.18-201ENST00000391200 SMCPP49901 116 aaPredicted RBP3.51□□□□□ -1.85
SNORA40.18-201ENST00000391200 FOXK1P85037 733 aa3.51□□□□□ -1.85
SNORA40.18-201ENST00000391200 DSG2Q14126 1118 aa3.51□□□□□ -1.85
SNORA40.18-201ENST00000391200 KLHL34Q8N239 644 aa3.51□□□□□ -1.85
SNORA40.18-201ENST00000391200 OXER1Q8TDS5 423 aa3.51□□□□□ -1.85
SNORA40.18-201ENST00000391200 UPF1Q92900 1129 aaKnown RBP eCLIP3.51□□□□□ -1.85
SNORA40.18-201ENST00000391200 IRF7Q92985 503 aa3.51□□□□□ -1.85
SNORA40.18-201ENST00000391200 CIZ1Q9ULV3 898 aaPredicted RBP3.51□□□□□ -1.85
SNORA40.18-201ENST00000391200 GGCXP38435 758 aa3.5□□□□□ -1.85
SNORA40.18-201ENST00000391200 APLP1P51693 650 aa3.5□□□□□ -1.85
SNORA40.18-201ENST00000391200 COPS2P61201 443 aa3.5□□□□□ -1.85
SNORA40.18-201ENST00000391200 FAM98CQ17RN3 349 aaKnown RBP3.5□□□□□ -1.85
SNORA40.18-201ENST00000391200 PLA2G2CQ5R387 149 aa3.5□□□□□ -1.85
SNORA40.18-201ENST00000391200 TOR4AQ9NXH8 423 aa3.5□□□□□ -1.85
SNORA40.18-201ENST00000391200 THOC2Q8NI27 1593 aaKnown RBP3.5□□□□□ -1.85
SNORA40.18-201ENST00000391200 LAMC3Q9Y6N6 1575 aa3.5□□□□□ -1.85
SNORA40.18-201ENST00000391200 IGHA1P01876 353 aa3.49□□□□□ -1.85
SNORA40.18-201ENST00000391200 BAZ1AQ9NRL2 1556 aaPredicted RBP3.49□□□□□ -1.85
SNORA40.18-201ENST00000391200 H3BM21 787 aa3.48□□□□□ -1.85
SNORA40.18-201ENST00000391200 PPP1R37O75864 691 aa3.48□□□□□ -1.85
SNORA40.18-201ENST00000391200 CTC1Q2NKJ3 1217 aa3.48□□□□□ -1.85
SNORA40.18-201ENST00000391200 JPH4Q96JJ6 628 aa3.48□□□□□ -1.85
SNORA40.18-201ENST00000391200 FANCD2Q9BXW9 1451 aa3.47□□□□□ -1.85
SNORA40.18-201ENST00000391200 MRC2Q9UBG0 1479 aa3.47□□□□□ -1.85
SNORA40.18-201ENST00000391200 SAMD7Q7Z3H4 446 aa3.47□□□□□ -1.85
SNORA40.18-201ENST00000391200 CHMP7Q8WUX9 453 aaPredicted RBP3.47□□□□□ -1.85
SNORA40.18-201ENST00000391200 KRTAP9-8Q9BYQ0 159 aa3.47□□□□□ -1.85
SNORA40.18-201ENST00000391200 ADAMTS8Q9UP79 889 aa3.47□□□□□ -1.85
SNORA40.18-201ENST00000391200 DNMT3AQ9Y6K1 912 aaPredicted RBP3.47□□□□□ -1.85
SNORA40.18-201ENST00000391200 HMGXB3Q12766 1538 aa3.47□□□□□ -1.85
SNORA40.18-201ENST00000391200 RIMBP3CA6NJZ7 1639 aa3.47□□□□□ -1.85
SNORA40.18-201ENST00000391200 RIMBP3BA6NNM3 1639 aa3.47□□□□□ -1.85
SNORA40.18-201ENST00000391200 RIMBP3Q9UFD9 1639 aa3.47□□□□□ -1.85
SNORA40.18-201ENST00000391200 TTBK1Q5TCY1 1321 aaPredicted RBP3.46□□□□□ -1.85
SNORA40.18-201ENST00000391200 SUPT5HO00267 1087 aaKnown RBP3.46□□□□□ -1.86
SNORA40.18-201ENST00000391200 ITGB2P05107 769 aa3.46□□□□□ -1.86
SNORA40.18-201ENST00000391200 RNF25Q96BH1 459 aaPredicted RBP3.46□□□□□ -1.86
SNORA40.18-201ENST00000391200 AQRO60306 1485 aaKnown RBP eCLIP3.46□□□□□ -1.86
SNORA40.18-201ENST00000391200 CEP164Q9UPV0 1460 aa3.46□□□□□ -1.86
SNORA40.18-201ENST00000391200 ZNF608Q9ULD9 1512 aaPredicted RBP3.45□□□□□ -1.86
SNORA40.18-201ENST00000391200 ZPR1O75312 459 aa3.45□□□□□ -1.86
SNORA40.18-201ENST00000391200 ARID1BQ8NFD5 2236 aaPredicted RBP3.45□□□□□ -1.86
SNORA40.18-201ENST00000391200 URB2Q14146 1524 aaKnown RBP3.44□□□□□ -1.86
SNORA40.18-201ENST00000391200 TDRD9Q8NDG6 1382 aaKnown RBP3.44□□□□□ -1.86
SNORA40.18-201ENST00000391200 IRS1P35568 1242 aa3.44□□□□□ -1.86
SNORA40.18-201ENST00000391200 ANKLE1Q8NAG6 615 aa3.44□□□□□ -1.86
SNORA40.18-201ENST00000391200 PCDHGA10Q9Y5H3 936 aa3.44□□□□□ -1.86
SNORA40.18-201ENST00000391200 TRIM6-TRIM34B2RNG4 842 aa3.43□□□□□ -1.86
SNORA40.18-201ENST00000391200 SMAPO00193 183 aa3.43□□□□□ -1.86
SNORA40.18-201ENST00000391200 ONECUT3O60422 494 aaPredicted RBP3.43□□□□□ -1.86
SNORA40.18-201ENST00000391200 SENP2Q9HC62 589 aa3.43□□□□□ -1.86
SNORA40.18-201ENST00000391200 CHD1O14646 1710 aa3.43□□□□□ -1.86
SNORA40.18-201ENST00000391200 RSF1Q96T23 1441 aaPredicted RBP3.43□□□□□ -1.86
SNORA40.18-201ENST00000391200 CCDC88BA6NC98 1476 aa3.42□□□□□ -1.86
SNORA40.18-201ENST00000391200 C3orf80F5H4A9 247 aa3.42□□□□□ -1.86
SNORA40.18-201ENST00000391200 TLL1O43897 1013 aa3.42□□□□□ -1.86
SNORA40.18-201ENST00000391200 GPHNQ9NQX3 736 aaPredicted RBP3.42□□□□□ -1.86
SNORA40.18-201ENST00000391200 WDR62O43379 1518 aa3.42□□□□□ -1.86
SNORA40.18-201ENST00000391200 PEG3Q9GZU2 1588 aa3.42□□□□□ -1.86
SNORA40.18-201ENST00000391200 RAD54L2Q9Y4B4 1467 aa3.41□□□□□ -1.86
SNORA40.18-201ENST00000391200 S1PR4O95977 384 aa3.41□□□□□ -1.86
SNORA40.18-201ENST00000391200 NPAS3Q8IXF0 933 aa3.41□□□□□ -1.86
SNORA40.18-201ENST00000391200 SOGA1O94964 1423 aa3.41□□□□□ -1.86
SNORA40.18-201ENST00000391200 CFTRP13569 1480 aa3.41□□□□□ -1.86
SNORA40.18-201ENST00000391200 ARHGEF11O15085 1522 aa3.4□□□□□ -1.86
SNORA40.18-201ENST00000391200 EVI5O60447 810 aa3.4□□□□□ -1.87
SNORA40.18-201ENST00000391200 SMPD1P17405 629 aa3.4□□□□□ -1.87
SNORA40.18-201ENST00000391200 CYP4X1Q8N118 509 aa3.4□□□□□ -1.87
SNORA40.18-201ENST00000391200 SPOCK3Q9BQ16 436 aa3.4□□□□□ -1.87
SNORA40.18-201ENST00000391200 KRTAP4-11Q9BYQ6 195 aa3.4□□□□□ -1.87
SNORA40.18-201ENST00000391200 KRTAP4-5Q9BYR2 181 aa3.4□□□□□ -1.87
SNORA40.18-201ENST00000391200 GOLGA2P5Q9HBQ8 144 aa3.4□□□□□ -1.87
SNORA40.18-201ENST00000391200 TSPOAP1O95153 1857 aa3.39□□□□□ -1.87
SNORA40.18-201ENST00000391200 TSKSQ9UJT2 592 aa3.39□□□□□ -1.87
SNORA40.18-201ENST00000391200 TOPBP1Q92547 1522 aa3.39□□□□□ -1.87
SNORA40.18-201ENST00000391200 MSTNO14793 375 aa3.38□□□□□ -1.87
SNORA40.18-201ENST00000391200 PROCP04070 461 aa3.38□□□□□ -1.87
SNORA40.18-201ENST00000391200 FOXK2Q01167 660 aa3.38□□□□□ -1.87
SNORA40.18-201ENST00000391200 FAM69CQ0P6D2 419 aa3.38□□□□□ -1.87
SNORA40.18-201ENST00000391200 PLA2G4EQ3MJ16 856 aa3.38□□□□□ -1.87
SNORA40.18-201ENST00000391200 KIFC2Q96AC6 838 aa3.38□□□□□ -1.87
SNORA40.18-201ENST00000391200 IFT140Q96RY7 1462 aa3.38□□□□□ -1.87
SNORA40.18-201ENST00000391200 PRDM2Q13029 1718 aa3.38□□□□□ -1.87
SNORA40.18-201ENST00000391200 K7ELQ4 463 aaPredicted RBP3.37□□□□□ -1.87
SNORA40.18-201ENST00000391200 RNF225M0QZC1 329 aaPredicted RBP3.37□□□□□ -1.87
SNORA40.18-201ENST00000391200 RIOK3O14730 519 aaKnown RBP3.37□□□□□ -1.87
SNORA40.18-201ENST00000391200 HPS1Q92902 700 aa3.37□□□□□ -1.87
SNORA40.18-201ENST00000391200 BCL11BQ9C0K0 894 aaPredicted RBP3.37□□□□□ -1.87
SNORA40.18-201ENST00000391200 ARAP1Q96P48 1450 aa3.36□□□□□ -1.87
SNORA40.18-201ENST00000391200 TOP2AP11388 1531 aaKnown RBP3.36□□□□□ -1.87
SNORA40.18-201ENST00000391200 J3QL48 77 aa3.36□□□□□ -1.87
SNORA40.18-201ENST00000391200 KRT76Q01546 638 aa3.36□□□□□ -1.87
SNORA40.18-201ENST00000391200 C6orf132Q5T0Z8 1188 aa3.36□□□□□ -1.87
SNORA40.18-201ENST00000391200 LMOD2Q6P5Q4 547 aa3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms