RNA–Protein interactions for RNA: ENST00000366442.2

SHC1-201, Transcript of SHC adaptor protein 1, humanhuman

TSL 3

Gene SHC1, Length 780 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1-201ENST00000366442 CHGAP10645 457 aaKnown RBP35.65■■■■□ 3.3
SHC1-201ENST00000366442 SLC26A8Q96RN1 970 aa35.64■■■■□ 3.3
SHC1-201ENST00000366442 ABCF1Q8NE71 845 aaKnown RBP eCLIP35.63■■■■□ 3.29
SHC1-201ENST00000366442 PPP1R15AO75807 674 aaPredicted RBP35.61■■■■□ 3.29
SHC1-201ENST00000366442 KCNA6P17658 529 aa35.61■■■■□ 3.29
SHC1-201ENST00000366442 ALKQ9UM73 1620 aa35.61■■■■□ 3.29
SHC1-201ENST00000366442 BCANQ96GW7 911 aa35.59■■■■□ 3.29
SHC1-201ENST00000366442 PIP4K2BP78356 416 aa35.58■■■■□ 3.29
SHC1-201ENST00000366442 SCAF1Q9H7N4 1312 aaKnown RBP35.57■■■■□ 3.28
SHC1-201ENST00000366442 NWD1Q149M9 1564 aa35.55■■■■□ 3.28
SHC1-201ENST00000366442 XIRP1Q702N8 1843 aaKnown RBP35.55■■■■□ 3.28
SHC1-201ENST00000366442 TRPM2O94759 1503 aa35.53■■■■□ 3.28
SHC1-201ENST00000366442 NKTRP30414 1462 aaKnown RBP35.53■■■■□ 3.28
SHC1-201ENST00000366442 TRIM52Q96A61 297 aa35.52■■■■□ 3.28
SHC1-201ENST00000366442 TBX22Q9Y458 520 aa35.5■■■■□ 3.27
SHC1-201ENST00000366442 TMEM94Q12767 1356 aa35.48■■■■□ 3.27
SHC1-201ENST00000366442 DIP2AQ14689 1571 aa35.47■■■■□ 3.27
SHC1-201ENST00000366442 CLTCL1P53675 1640 aa35.47■■■■□ 3.27
SHC1-201ENST00000366442 ADAMTS13Q76LX8 1427 aa35.47■■■■□ 3.27
SHC1-201ENST00000366442 CHD2O14647 1828 aaKnown RBP35.46■■■■□ 3.27
SHC1-201ENST00000366442 HSPA1LP34931 641 aa35.46■■■■□ 3.27
SHC1-201ENST00000366442 NUTM2DQ5VT03 806 aaPredicted RBP35.46■■■■□ 3.27
SHC1-201ENST00000366442 PROSER2Q86WR7 435 aaPredicted RBP35.45■■■■□ 3.27
SHC1-201ENST00000366442 SENP3Q9H4L4 574 aaPredicted RBP35.45■■■■□ 3.27
SHC1-201ENST00000366442 SLC4A1APQ9BWU0 796 aaKnown RBP35.44■■■■□ 3.26
SHC1-201ENST00000366442 PIK3R4Q99570 1358 aa35.41■■■■□ 3.26
SHC1-201ENST00000366442 DISP3Q9P2K9 1392 aa35.4■■■■□ 3.26
SHC1-201ENST00000366442 ZNF326Q5BKZ1 582 aaKnown RBP35.39■■■■□ 3.26
SHC1-201ENST00000366442 KIF1BO60333 1816 aa35.38■■■■□ 3.25
SHC1-201ENST00000366442 SETBP1Q9Y6X0 1596 aa35.35■■■■□ 3.25
SHC1-201ENST00000366442 NEXMIFQ5QGS0 1516 aa35.33■■■■□ 3.25
SHC1-201ENST00000366442 RBM33Q96EV2 1170 aaKnown RBP35.32■■■■□ 3.24
SHC1-201ENST00000366442 NRXN3Q9Y4C0 1643 aa35.32■■■■□ 3.24
SHC1-201ENST00000366442 NCOA3Q9Y6Q9 1424 aa35.32■■■■□ 3.24
SHC1-201ENST00000366442 ACIN1Q9UKV3 1341 aaKnown RBP35.32■■■■□ 3.24
SHC1-201ENST00000366442 MSH6P52701 1360 aa35.3■■■■□ 3.24
SHC1-201ENST00000366442 FAM135BQ49AJ0 1406 aa35.29■■■■□ 3.24
SHC1-201ENST00000366442 SETD5Q9C0A6 1442 aa35.24■■■■□ 3.23
SHC1-201ENST00000366442 MPHOSPH9Q99550 1183 aa35.24■■■■□ 3.23
SHC1-201ENST00000366442 PTPRUQ92729 1446 aa35.23■■■■□ 3.23
SHC1-201ENST00000366442 AMOTL2Q9Y2J4 779 aa35.22■■■■□ 3.23
SHC1-201ENST00000366442 RPGRIP1LQ68CZ1 1315 aa35.22■■■■□ 3.23
SHC1-201ENST00000366442 FOXD1Q16676 465 aa35.21■■■■□ 3.23
SHC1-201ENST00000366442 VGFO15240 615 aaPredicted RBP35.19■■■■□ 3.22
SHC1-201ENST00000366442 XRN1Q8IZH2 1706 aaKnown RBP35.18■■■■□ 3.22
SHC1-201ENST00000366442 ROBO1Q9Y6N7 1651 aa35.17■■■■□ 3.22
SHC1-201ENST00000366442 CCDC144AA2RUR9 1427 aa35.16■■■■□ 3.22
SHC1-201ENST00000366442 METP08581 1390 aa35.16■■■■□ 3.22
SHC1-201ENST00000366442 SLAIN2Q9P270 581 aa35.15■■■■□ 3.22
SHC1-201ENST00000366442 MED1Q15648 1581 aaPredicted RBP35.15■■■■□ 3.22
SHC1-201ENST00000366442 C14orf37Q86TY3 774 aa35.13■■■■□ 3.21
SHC1-201ENST00000366442 C19orf44Q9H6X5 657 aa35.13■■■■□ 3.21
SHC1-201ENST00000366442 PPLO60437 1756 aa35.13■■■■□ 3.21
SHC1-201ENST00000366442 SIPA1L2Q9P2F8 1722 aaPredicted RBP35.1■■■■□ 3.21
SHC1-201ENST00000366442 ILDR2Q71H61 639 aa35.1■■■■□ 3.21
SHC1-201ENST00000366442 RAB3GAP2Q9H2M9 1393 aa35.1■■■■□ 3.21
SHC1-201ENST00000366442 CADPS2Q86UW7 1296 aa35.09■■■■□ 3.21
SHC1-201ENST00000366442 SPATA31E1Q6ZUB1 1445 aa35.07■■■■□ 3.21
SHC1-201ENST00000366442 SETD1AO15047 1707 aaKnown RBP35.06■■■■□ 3.2
SHC1-201ENST00000366442 ATF3P18847 181 aa35.04■■■■□ 3.2
SHC1-201ENST00000366442 DCCP43146 1447 aa35.04■■■■□ 3.2
SHC1-201ENST00000366442 ANKRD30BQ9BXX2 1392 aa34.99■■■■□ 3.19
SHC1-201ENST00000366442 PTCH1Q13635 1447 aa34.98■■■■□ 3.19
SHC1-201ENST00000366442 PRAG1Q86YV5 1406 aa34.98■■■■□ 3.19
SHC1-201ENST00000366442 RGL3Q3MIN7 710 aa34.97■■■■□ 3.19
SHC1-201ENST00000366442 IFT172Q9UG01 1749 aa34.97■■■■□ 3.19
SHC1-201ENST00000366442 HRCP23327 699 aa34.95■■■■□ 3.19
SHC1-201ENST00000366442 ADGRL3Q9HAR2 1447 aa34.95■■■■□ 3.19
SHC1-201ENST00000366442 PHLPP1O60346 1717 aa34.95■■■■□ 3.18
SHC1-201ENST00000366442 ADGRF5Q8IZF2 1346 aa34.93■■■■□ 3.18
SHC1-201ENST00000366442 PHF23Q9BUL5 403 aaPredicted RBP34.89■■■■□ 3.18
SHC1-201ENST00000366442 NALCNQ8IZF0 1738 aa34.89■■■■□ 3.18
SHC1-201ENST00000366442 ROBO2Q9HCK4 1378 aa34.88■■■■□ 3.17
SHC1-201ENST00000366442 AHDC1Q5TGY3 1603 aaPredicted RBP34.88■■■■□ 3.17
SHC1-201ENST00000366442 COL16A1Q07092 1604 aaPredicted RBP34.87■■■■□ 3.17
SHC1-201ENST00000366442 MST1RQ04912 1400 aa34.87■■■■□ 3.17
SHC1-201ENST00000366442 SOCS7O14512 581 aa34.85■■■■□ 3.17
SHC1-201ENST00000366442 PIK3C2GO75747 1445 aa34.85■■■■□ 3.17
SHC1-201ENST00000366442 BRINP3Q76B58 766 aa34.85■■■■□ 3.17
SHC1-201ENST00000366442 JCADQ9P266 1359 aa34.84■■■■□ 3.17
SHC1-201ENST00000366442 ASXL1Q8IXJ9 1541 aa34.8■■■■□ 3.16
SHC1-201ENST00000366442 MYOM2P54296 1465 aa34.78■■■■□ 3.16
SHC1-201ENST00000366442 TECPR2O15040 1411 aa34.78■■■■□ 3.16
SHC1-201ENST00000366442 NRXN1Q9ULB1 1477 aa34.78■■■■□ 3.16
SHC1-201ENST00000366442 LRPPRCP42704 1394 aaKnown RBP34.75■■■■□ 3.15
SHC1-201ENST00000366442 ABCC11Q96J66 1382 aa34.73■■■■□ 3.15
SHC1-201ENST00000366442 NHSL1Q5SYE7 1610 aa34.72■■■■□ 3.15
SHC1-201ENST00000366442 C1orf167Q5SNV9 1468 aa34.71■■■■□ 3.15
SHC1-201ENST00000366442 C14orf93Q9H972 538 aaKnown RBP34.71■■■■□ 3.15
SHC1-201ENST00000366442 KNDC1Q76NI1 1749 aa34.71■■■■□ 3.15
SHC1-201ENST00000366442 RGS17Q9UGC6 210 aaPredicted RBP34.69■■■■□ 3.14
SHC1-201ENST00000366442 SPATA31A6Q5VVP1 1343 aa34.69■■■■□ 3.14
SHC1-201ENST00000366442 LAMC1P11047 1609 aa34.69■■■■□ 3.14
SHC1-201ENST00000366442 SHPRHQ149N8 1683 aa34.69■■■■□ 3.14
SHC1-201ENST00000366442 TMEM132EQ6IEE7 984 aa34.68■■■■□ 3.14
SHC1-201ENST00000366442 YTHDC2Q9H6S0 1430 aaKnown RBP34.67■■■■□ 3.14
SHC1-201ENST00000366442 STK26Q9P289 416 aa34.67■■■■□ 3.14
SHC1-201ENST00000366442 CDC42BPGQ6DT37 1551 aa34.66■■■■□ 3.14
SHC1-201ENST00000366442 SIRT1Q96EB6 747 aa34.62■■■■□ 3.13
SHC1-201ENST00000366442 CFAP70Q5T0N1 1121 aa34.61■■■■□ 3.13
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms