RNA–Protein interactions for RNA: ENST00000358239.8

PPP1CA-202, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 2 BASIC

Gene PPP1CA, Length 1,054 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-202ENST00000358239 TRPM2O94759 1503 aa30.82■■■□□ 2.52
PPP1CA-202ENST00000358239 PLEKHG1Q9ULL1 1385 aa30.79■■■□□ 2.52
PPP1CA-202ENST00000358239 CHD2O14647 1828 aaKnown RBP30.78■■■□□ 2.52
PPP1CA-202ENST00000358239 CHGAP10645 457 aaKnown RBP30.78■■■□□ 2.52
PPP1CA-202ENST00000358239 ABCF1Q8NE71 845 aaKnown RBP eCLIP30.78■■■□□ 2.52
PPP1CA-202ENST00000358239 CLTCL1P53675 1640 aa30.77■■■□□ 2.52
PPP1CA-202ENST00000358239 NWD1Q149M9 1564 aa30.76■■■□□ 2.52
PPP1CA-202ENST00000358239 TOM1O60784 492 aa30.76■■■□□ 2.51
PPP1CA-202ENST00000358239 PPP1R15AO75807 674 aaPredicted RBP30.76■■■□□ 2.51
PPP1CA-202ENST00000358239 TRIM52Q96A61 297 aa30.75■■■□□ 2.51
PPP1CA-202ENST00000358239 DIP2AQ14689 1571 aa30.74■■■□□ 2.51
PPP1CA-202ENST00000358239 BCANQ96GW7 911 aa30.72■■■□□ 2.51
PPP1CA-202ENST00000358239 SLC26A8Q96RN1 970 aa30.71■■■□□ 2.51
PPP1CA-202ENST00000358239 NKTRP30414 1462 aaKnown RBP30.7■■■□□ 2.51
PPP1CA-202ENST00000358239 KCNA6P17658 529 aa30.69■■■□□ 2.5
PPP1CA-202ENST00000358239 ACIN1Q9UKV3 1341 aaKnown RBP30.69■■■□□ 2.5
PPP1CA-202ENST00000358239 ALKQ9UM73 1620 aa30.69■■■□□ 2.5
PPP1CA-202ENST00000358239 SLC4A1APQ9BWU0 796 aaKnown RBP30.68■■■□□ 2.5
PPP1CA-202ENST00000358239 TBX22Q9Y458 520 aa30.63■■■□□ 2.49
PPP1CA-202ENST00000358239 ADAMTS13Q76LX8 1427 aa30.62■■■□□ 2.49
PPP1CA-202ENST00000358239 NEXMIFQ5QGS0 1516 aa30.62■■■□□ 2.49
PPP1CA-202ENST00000358239 SETBP1Q9Y6X0 1596 aa30.62■■■□□ 2.49
PPP1CA-202ENST00000358239 NRXN3Q9Y4C0 1643 aa30.61■■■□□ 2.49
PPP1CA-202ENST00000358239 PIK3R4Q99570 1358 aa30.6■■■□□ 2.49
PPP1CA-202ENST00000358239 SCAF1Q9H7N4 1312 aaKnown RBP30.59■■■□□ 2.49
PPP1CA-202ENST00000358239 PIP4K2BP78356 416 aa30.59■■■□□ 2.49
PPP1CA-202ENST00000358239 ZNF326Q5BKZ1 582 aaKnown RBP30.59■■■□□ 2.49
PPP1CA-202ENST00000358239 NUTM2DQ5VT03 806 aaPredicted RBP30.59■■■□□ 2.49
PPP1CA-202ENST00000358239 SETD5Q9C0A6 1442 aa30.58■■■□□ 2.49
PPP1CA-202ENST00000358239 TMEM94Q12767 1356 aa30.57■■■□□ 2.48
PPP1CA-202ENST00000358239 PPLO60437 1756 aa30.56■■■□□ 2.48
PPP1CA-202ENST00000358239 PROSER2Q86WR7 435 aaPredicted RBP30.54■■■□□ 2.48
PPP1CA-202ENST00000358239 SENP3Q9H4L4 574 aaPredicted RBP30.54■■■□□ 2.48
PPP1CA-202ENST00000358239 MPHOSPH9Q99550 1183 aa30.51■■■□□ 2.47
PPP1CA-202ENST00000358239 XRN1Q8IZH2 1706 aaKnown RBP30.49■■■□□ 2.47
PPP1CA-202ENST00000358239 CCDC144AA2RUR9 1427 aa30.48■■■□□ 2.47
PPP1CA-202ENST00000358239 NCOA3Q9Y6Q9 1424 aa30.48■■■□□ 2.47
PPP1CA-202ENST00000358239 RPGRIP1LQ68CZ1 1315 aa30.47■■■□□ 2.47
PPP1CA-202ENST00000358239 MSH6P52701 1360 aa30.46■■■□□ 2.47
PPP1CA-202ENST00000358239 IFT172Q9UG01 1749 aa30.45■■■□□ 2.47
PPP1CA-202ENST00000358239 HSPA1LP34931 641 aa30.45■■■□□ 2.47
PPP1CA-202ENST00000358239 SETD1AO15047 1707 aaKnown RBP30.44■■■□□ 2.46
PPP1CA-202ENST00000358239 RAB3GAP2Q9H2M9 1393 aa30.44■■■□□ 2.46
PPP1CA-202ENST00000358239 FOXD1Q16676 465 aa30.44■■■□□ 2.46
PPP1CA-202ENST00000358239 VGFO15240 615 aaPredicted RBP30.42■■■□□ 2.46
PPP1CA-202ENST00000358239 ROBO1Q9Y6N7 1651 aa30.42■■■□□ 2.46
PPP1CA-202ENST00000358239 SIPA1L2Q9P2F8 1722 aaPredicted RBP30.41■■■□□ 2.46
PPP1CA-202ENST00000358239 FAM135BQ49AJ0 1406 aa30.39■■■□□ 2.46
PPP1CA-202ENST00000358239 PTPRUQ92729 1446 aa30.39■■■□□ 2.46
PPP1CA-202ENST00000358239 RBM33Q96EV2 1170 aaKnown RBP30.39■■■□□ 2.46
PPP1CA-202ENST00000358239 AMOTL2Q9Y2J4 779 aa30.38■■■□□ 2.45
PPP1CA-202ENST00000358239 SPATA31E1Q6ZUB1 1445 aa30.36■■■□□ 2.45
PPP1CA-202ENST00000358239 DISP3Q9P2K9 1392 aa30.35■■■□□ 2.45
PPP1CA-202ENST00000358239 METP08581 1390 aa30.34■■■□□ 2.45
PPP1CA-202ENST00000358239 HRCP23327 699 aa30.32■■■□□ 2.44
PPP1CA-202ENST00000358239 C14orf37Q86TY3 774 aa30.31■■■□□ 2.44
PPP1CA-202ENST00000358239 C19orf44Q9H6X5 657 aa30.29■■■□□ 2.44
PPP1CA-202ENST00000358239 ANKRD30BQ9BXX2 1392 aa30.28■■■□□ 2.44
PPP1CA-202ENST00000358239 DCCP43146 1447 aa30.28■■■□□ 2.44
PPP1CA-202ENST00000358239 MED1Q15648 1581 aaPredicted RBP30.28■■■□□ 2.44
PPP1CA-202ENST00000358239 SLAIN2Q9P270 581 aa30.27■■■□□ 2.44
PPP1CA-202ENST00000358239 PHLPP1O60346 1717 aa30.26■■■□□ 2.43
PPP1CA-202ENST00000358239 CADPS2Q86UW7 1296 aa30.26■■■□□ 2.43
PPP1CA-202ENST00000358239 NALCNQ8IZF0 1738 aa30.26■■■□□ 2.43
PPP1CA-202ENST00000358239 PRAG1Q86YV5 1406 aa30.25■■■□□ 2.43
PPP1CA-202ENST00000358239 PTCH1Q13635 1447 aa30.24■■■□□ 2.43
PPP1CA-202ENST00000358239 ATF3P18847 181 aa30.23■■■□□ 2.43
PPP1CA-202ENST00000358239 RGL3Q3MIN7 710 aa30.22■■■□□ 2.43
PPP1CA-202ENST00000358239 LAMC1P11047 1609 aa30.2■■■□□ 2.43
PPP1CA-202ENST00000358239 ADGRL3Q9HAR2 1447 aa30.19■■■□□ 2.42
PPP1CA-202ENST00000358239 KNDC1Q76NI1 1749 aa30.18■■■□□ 2.42
PPP1CA-202ENST00000358239 PIK3C2GO75747 1445 aa30.17■■■□□ 2.42
PPP1CA-202ENST00000358239 ADGRF5Q8IZF2 1346 aa30.17■■■□□ 2.42
PPP1CA-202ENST00000358239 MYOM2P54296 1465 aa30.16■■■□□ 2.42
PPP1CA-202ENST00000358239 AHDC1Q5TGY3 1603 aaPredicted RBP30.14■■■□□ 2.41
PPP1CA-202ENST00000358239 COL16A1Q07092 1604 aaPredicted RBP30.13■■■□□ 2.41
PPP1CA-202ENST00000358239 NRXN1Q9ULB1 1477 aa30.12■■■□□ 2.41
PPP1CA-202ENST00000358239 ROBO2Q9HCK4 1378 aa30.11■■■□□ 2.41
PPP1CA-202ENST00000358239 MST1RQ04912 1400 aa30.09■■■□□ 2.41
PPP1CA-202ENST00000358239 NHSL1Q5SYE7 1610 aa30.08■■■□□ 2.41
PPP1CA-202ENST00000358239 ASXL1Q8IXJ9 1541 aa30.08■■■□□ 2.41
PPP1CA-202ENST00000358239 TECPR2O15040 1411 aa30.08■■■□□ 2.41
PPP1CA-202ENST00000358239 SHPRHQ149N8 1683 aa30.04■■■□□ 2.4
PPP1CA-202ENST00000358239 LRPPRCP42704 1394 aaKnown RBP30.03■■■□□ 2.4
PPP1CA-202ENST00000358239 CDC42BPGQ6DT37 1551 aa30.03■■■□□ 2.4
PPP1CA-202ENST00000358239 BRINP3Q76B58 766 aa30.02■■■□□ 2.4
PPP1CA-202ENST00000358239 JCADQ9P266 1359 aa30.02■■■□□ 2.4
PPP1CA-202ENST00000358239 ILDR2Q71H61 639 aa30.01■■■□□ 2.39
PPP1CA-202ENST00000358239 ABCC11Q96J66 1382 aa30.01■■■□□ 2.39
PPP1CA-202ENST00000358239 PHF23Q9BUL5 403 aaPredicted RBP30■■■□□ 2.39
PPP1CA-202ENST00000358239 C14orf93Q9H972 538 aaKnown RBP30■■■□□ 2.39
PPP1CA-202ENST00000358239 YTHDC2Q9H6S0 1430 aaKnown RBP29.99■■■□□ 2.39
PPP1CA-202ENST00000358239 STAC3Q96MF2 364 aa29.98■■■□□ 2.39
PPP1CA-202ENST00000358239 C1orf167Q5SNV9 1468 aa29.95■■■□□ 2.39
PPP1CA-202ENST00000358239 TMEM132EQ6IEE7 984 aa29.95■■■□□ 2.39
PPP1CA-202ENST00000358239 STK26Q9P289 416 aa29.94■■■□□ 2.38
PPP1CA-202ENST00000358239 DHX57Q6P158 1386 aaKnown RBP29.93■■■□□ 2.38
PPP1CA-202ENST00000358239 CFAP70Q5T0N1 1121 aa29.91■■■□□ 2.38
PPP1CA-202ENST00000358239 SIRT1Q96EB6 747 aa29.91■■■□□ 2.38
PPP1CA-202ENST00000358239 FMN2Q9NZ56 1722 aa29.91■■■□□ 2.38
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms