RNA–Protein interactions for RNA: ENST00000339217.8

TCEA2-201, Transcript of transcription elongation factor A2, humanhuman

TSL 3

Gene TCEA2, Length 953 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCEA2-201ENST00000339217 ABCF1Q8NE71 845 aaKnown RBP eCLIP39.49■■■■□ 3.91
TCEA2-201ENST00000339217 ALKQ9UM73 1620 aa39.49■■■■□ 3.91
TCEA2-201ENST00000339217 TOM1O60784 492 aa39.48■■■■□ 3.91
TCEA2-201ENST00000339217 CHGAP10645 457 aaKnown RBP39.47■■■■□ 3.91
TCEA2-201ENST00000339217 SLC26A8Q96RN1 970 aa39.47■■■■□ 3.91
TCEA2-201ENST00000339217 XIRP1Q702N8 1843 aaKnown RBP39.47■■■■□ 3.91
TCEA2-201ENST00000339217 NWD1Q149M9 1564 aa39.46■■■■□ 3.91
TCEA2-201ENST00000339217 KCNA6P17658 529 aa39.44■■■■□ 3.9
TCEA2-201ENST00000339217 CLTCL1P53675 1640 aa39.43■■■■□ 3.9
TCEA2-201ENST00000339217 PPP1R15AO75807 674 aaPredicted RBP39.42■■■■□ 3.9
TCEA2-201ENST00000339217 TRIM52Q96A61 297 aa39.4■■■■□ 3.9
TCEA2-201ENST00000339217 NKTRP30414 1462 aaKnown RBP39.39■■■■□ 3.9
TCEA2-201ENST00000339217 DIP2AQ14689 1571 aa39.38■■■■□ 3.9
TCEA2-201ENST00000339217 CHD2O14647 1828 aaKnown RBP39.37■■■■□ 3.89
TCEA2-201ENST00000339217 TBX22Q9Y458 520 aa39.36■■■■□ 3.89
TCEA2-201ENST00000339217 ADAMTS13Q76LX8 1427 aa39.36■■■■□ 3.89
TCEA2-201ENST00000339217 BCANQ96GW7 911 aa39.34■■■■□ 3.89
TCEA2-201ENST00000339217 SLC4A1APQ9BWU0 796 aaKnown RBP39.34■■■■□ 3.89
TCEA2-201ENST00000339217 KIF1BO60333 1816 aa39.33■■■■□ 3.89
TCEA2-201ENST00000339217 TMEM94Q12767 1356 aa39.3■■■■□ 3.88
TCEA2-201ENST00000339217 PIP4K2BP78356 416 aa39.29■■■■□ 3.88
TCEA2-201ENST00000339217 NUTM2DQ5VT03 806 aaPredicted RBP39.28■■■■□ 3.88
TCEA2-201ENST00000339217 PIK3R4Q99570 1358 aa39.28■■■■□ 3.88
TCEA2-201ENST00000339217 SETBP1Q9Y6X0 1596 aa39.27■■■■□ 3.88
TCEA2-201ENST00000339217 NEXMIFQ5QGS0 1516 aa39.26■■■■□ 3.88
TCEA2-201ENST00000339217 ACIN1Q9UKV3 1341 aaKnown RBP39.26■■■■□ 3.88
TCEA2-201ENST00000339217 NRXN3Q9Y4C0 1643 aa39.25■■■■□ 3.87
TCEA2-201ENST00000339217 SCAF1Q9H7N4 1312 aaKnown RBP39.23■■■■□ 3.87
TCEA2-201ENST00000339217 PROSER2Q86WR7 435 aaPredicted RBP39.22■■■■□ 3.87
TCEA2-201ENST00000339217 SETD5Q9C0A6 1442 aa39.22■■■■□ 3.87
TCEA2-201ENST00000339217 SENP3Q9H4L4 574 aaPredicted RBP39.21■■■■□ 3.87
TCEA2-201ENST00000339217 ZNF326Q5BKZ1 582 aaKnown RBP39.2■■■■□ 3.87
TCEA2-201ENST00000339217 HSPA1LP34931 641 aa39.18■■■■□ 3.86
TCEA2-201ENST00000339217 MPHOSPH9Q99550 1183 aa39.16■■■■□ 3.86
TCEA2-201ENST00000339217 NCOA3Q9Y6Q9 1424 aa39.15■■■■□ 3.86
TCEA2-201ENST00000339217 PTPRUQ92729 1446 aa39.1■■■■□ 3.85
TCEA2-201ENST00000339217 FOXD1Q16676 465 aa39.09■■■■□ 3.85
TCEA2-201ENST00000339217 RBM33Q96EV2 1170 aaKnown RBP39.09■■■■□ 3.85
TCEA2-201ENST00000339217 RPGRIP1LQ68CZ1 1315 aa39.09■■■■□ 3.85
TCEA2-201ENST00000339217 XRN1Q8IZH2 1706 aaKnown RBP39.09■■■■□ 3.85
TCEA2-201ENST00000339217 FAM135BQ49AJ0 1406 aa39.07■■■■□ 3.85
TCEA2-201ENST00000339217 MSH6P52701 1360 aa39.07■■■■□ 3.84
TCEA2-201ENST00000339217 PPLO60437 1756 aa39.06■■■■□ 3.84
TCEA2-201ENST00000339217 RAB3GAP2Q9H2M9 1393 aa39.06■■■■□ 3.84
TCEA2-201ENST00000339217 CCDC144AA2RUR9 1427 aa39.06■■■■□ 3.84
TCEA2-201ENST00000339217 AMOTL2Q9Y2J4 779 aa39.03■■■■□ 3.84
TCEA2-201ENST00000339217 VGFO15240 615 aaPredicted RBP39.02■■■■□ 3.84
TCEA2-201ENST00000339217 METP08581 1390 aa39.01■■■■□ 3.84
TCEA2-201ENST00000339217 DISP3Q9P2K9 1392 aa39.01■■■■□ 3.84
TCEA2-201ENST00000339217 SPATA31E1Q6ZUB1 1445 aa39■■■■□ 3.83
TCEA2-201ENST00000339217 SETD1AO15047 1707 aaKnown RBP39■■■■□ 3.83
TCEA2-201ENST00000339217 ROBO1Q9Y6N7 1651 aa38.97■■■■□ 3.83
TCEA2-201ENST00000339217 SIPA1L2Q9P2F8 1722 aaPredicted RBP38.94■■■■□ 3.82
TCEA2-201ENST00000339217 IFT172Q9UG01 1749 aa38.92■■■■□ 3.82
TCEA2-201ENST00000339217 HRCP23327 699 aa38.91■■■■□ 3.82
TCEA2-201ENST00000339217 C19orf44Q9H6X5 657 aa38.91■■■■□ 3.82
TCEA2-201ENST00000339217 SLAIN2Q9P270 581 aa38.9■■■■□ 3.82
TCEA2-201ENST00000339217 PRAG1Q86YV5 1406 aa38.89■■■■□ 3.82
TCEA2-201ENST00000339217 MED1Q15648 1581 aaPredicted RBP38.87■■■■□ 3.81
TCEA2-201ENST00000339217 DCCP43146 1447 aa38.87■■■■□ 3.81
TCEA2-201ENST00000339217 ANKRD30BQ9BXX2 1392 aa38.85■■■■□ 3.81
TCEA2-201ENST00000339217 C14orf37Q86TY3 774 aa38.84■■■■□ 3.81
TCEA2-201ENST00000339217 CADPS2Q86UW7 1296 aa38.84■■■■□ 3.81
TCEA2-201ENST00000339217 PTCH1Q13635 1447 aa38.81■■■■□ 3.8
TCEA2-201ENST00000339217 RGL3Q3MIN7 710 aa38.78■■■■□ 3.8
TCEA2-201ENST00000339217 ADGRF5Q8IZF2 1346 aa38.78■■■■□ 3.8
TCEA2-201ENST00000339217 ATF3P18847 181 aa38.77■■■■□ 3.8
TCEA2-201ENST00000339217 ADGRL3Q9HAR2 1447 aa38.76■■■■□ 3.8
TCEA2-201ENST00000339217 NALCNQ8IZF0 1738 aa38.74■■■■□ 3.79
TCEA2-201ENST00000339217 PIK3C2GO75747 1445 aa38.72■■■■□ 3.79
TCEA2-201ENST00000339217 PHLPP1O60346 1717 aa38.72■■■■□ 3.79
TCEA2-201ENST00000339217 ILDR2Q71H61 639 aa38.7■■■■□ 3.79
TCEA2-201ENST00000339217 ROBO2Q9HCK4 1378 aa38.7■■■■□ 3.78
TCEA2-201ENST00000339217 NRXN1Q9ULB1 1477 aa38.68■■■■□ 3.78
TCEA2-201ENST00000339217 AHDC1Q5TGY3 1603 aaPredicted RBP38.67■■■■□ 3.78
TCEA2-201ENST00000339217 MYOM2P54296 1465 aa38.67■■■■□ 3.78
TCEA2-201ENST00000339217 MST1RQ04912 1400 aa38.67■■■■□ 3.78
TCEA2-201ENST00000339217 COL16A1Q07092 1604 aaPredicted RBP38.66■■■■□ 3.78
TCEA2-201ENST00000339217 TECPR2O15040 1411 aa38.63■■■■□ 3.78
TCEA2-201ENST00000339217 ASXL1Q8IXJ9 1541 aa38.63■■■■□ 3.78
TCEA2-201ENST00000339217 KNDC1Q76NI1 1749 aa38.6■■■■□ 3.77
TCEA2-201ENST00000339217 BRINP3Q76B58 766 aa38.59■■■■□ 3.77
TCEA2-201ENST00000339217 LAMC1P11047 1609 aa38.58■■■■□ 3.77
TCEA2-201ENST00000339217 LRPPRCP42704 1394 aaKnown RBP38.57■■■■□ 3.77
TCEA2-201ENST00000339217 ABCC11Q96J66 1382 aa38.56■■■■□ 3.76
TCEA2-201ENST00000339217 JCADQ9P266 1359 aa38.55■■■■□ 3.76
TCEA2-201ENST00000339217 C14orf93Q9H972 538 aaKnown RBP38.53■■■■□ 3.76
TCEA2-201ENST00000339217 NHSL1Q5SYE7 1610 aa38.52■■■■□ 3.76
TCEA2-201ENST00000339217 YTHDC2Q9H6S0 1430 aaKnown RBP38.49■■■■□ 3.75
TCEA2-201ENST00000339217 CDC42BPGQ6DT37 1551 aa38.48■■■■□ 3.75
TCEA2-201ENST00000339217 C1orf167Q5SNV9 1468 aa38.48■■■■□ 3.75
TCEA2-201ENST00000339217 TMEM132EQ6IEE7 984 aa38.47■■■■□ 3.75
TCEA2-201ENST00000339217 PHF23Q9BUL5 403 aaPredicted RBP38.47■■■■□ 3.75
TCEA2-201ENST00000339217 SHPRHQ149N8 1683 aa38.46■■■■□ 3.75
TCEA2-201ENST00000339217 STAC3Q96MF2 364 aa38.44■■■■□ 3.74
TCEA2-201ENST00000339217 SIRT1Q96EB6 747 aa38.43■■■■□ 3.74
TCEA2-201ENST00000339217 CFAP70Q5T0N1 1121 aa38.42■■■■□ 3.74
TCEA2-201ENST00000339217 STK26Q9P289 416 aa38.42■■■■□ 3.74
TCEA2-201ENST00000339217 SOCS7O14512 581 aa38.4■■■■□ 3.74
TCEA2-201ENST00000339217 SPATA31A6Q5VVP1 1343 aa38.38■■■■□ 3.74
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms