RNA–Protein interactions for RNA: ENSMUST00000222544.1

Trim27-206, Transcript of Zinc finger protein RFP, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Trim27, Length 4,312 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim27-206ENSMUST00000222544 Triml2E9PW10 424 aa17.06■□□□□ 0.32
Trim27-206ENSMUST00000222544 Cd109Q8R422 1442 aa17.06■□□□□ 0.32
Trim27-206ENSMUST00000222544 Rab3gap2Q8BMG7 1366 aa17.06■□□□□ 0.32
Trim27-206ENSMUST00000222544 CadpsQ80TJ1 1355 aa17.05■□□□□ 0.32
Trim27-206ENSMUST00000222544 MsnP26041 577 aaKnown RBP17.05■□□□□ 0.32
Trim27-206ENSMUST00000222544 Arhgap31A6X8Z5 1425 aa17.05■□□□□ 0.32
Trim27-206ENSMUST00000222544 Zfp777B9EKF4 885 aa17.05■□□□□ 0.32
Trim27-206ENSMUST00000222544 Ddrgk1Q80WW9 315 aa17.05■□□□□ 0.32
Trim27-206ENSMUST00000222544 Dnajc5bQ9CQ94 199 aa17.05■□□□□ 0.32
Trim27-206ENSMUST00000222544 Pes1Q9EQ61 584 aaKnown RBP17.05■□□□□ 0.32
Trim27-206ENSMUST00000222544 VgfQ0VGU4 617 aa17.04■□□□□ 0.32
Trim27-206ENSMUST00000222544 Tnnt2P50752 301 aa17.04■□□□□ 0.32
Trim27-206ENSMUST00000222544 Stard8Q8K031 1019 aa17.04■□□□□ 0.32
Trim27-206ENSMUST00000222544 CenpjQ569L8 1344 aa17.04■□□□□ 0.32
Trim27-206ENSMUST00000222544 Polr1aO35134 1717 aaKnown RBP17.04■□□□□ 0.32
Trim27-206ENSMUST00000222544 Ppp2r3aB2RXC8 1150 aa17.04■□□□□ 0.32
Trim27-206ENSMUST00000222544 Eif4g2Q62448 906 aaKnown RBP17.03■□□□□ 0.32
Trim27-206ENSMUST00000222544 Abcc5Q9R1X5 1436 aa17.03■□□□□ 0.32
Trim27-206ENSMUST00000222544 Camsap1A2AHC3 1581 aa17.03■□□□□ 0.32
Trim27-206ENSMUST00000222544 Egfem1Q8C088 590 aa17.02■□□□□ 0.32
Trim27-206ENSMUST00000222544 Ipo4Q8VI75 1082 aa17.02■□□□□ 0.32
Trim27-206ENSMUST00000222544 EprsQ8CGC7 1512 aaKnown RBP17.02■□□□□ 0.32
Trim27-206ENSMUST00000222544 Shq1Q7TMX5 569 aa17.02■□□□□ 0.31
Trim27-206ENSMUST00000222544 Nek4Q9Z1J2 792 aa17.02■□□□□ 0.31
Trim27-206ENSMUST00000222544 Brpf1B2RRD7 1212 aa17.01■□□□□ 0.31
Trim27-206ENSMUST00000222544 Rassf8Q8CJ96 419 aa17.01■□□□□ 0.31
Trim27-206ENSMUST00000222544 NexmifQ5DTT1 1515 aa17.01■□□□□ 0.31
Trim27-206ENSMUST00000222544 Puf60Q3UEB3 564 aaKnown RBP17.01■□□□□ 0.31
Trim27-206ENSMUST00000222544 Casq1O09165 405 aa17.01■□□□□ 0.31
Trim27-206ENSMUST00000222544 Nol12Q8BG17 217 aa17■□□□□ 0.31
Trim27-206ENSMUST00000222544 CrebrfQ8CDG5 640 aaKnown RBP17■□□□□ 0.31
Trim27-206ENSMUST00000222544 Sh3bp5Q9Z131 463 aa17■□□□□ 0.31
Trim27-206ENSMUST00000222544 Rbm25B2RY56 838 aaKnown RBP17■□□□□ 0.31
Trim27-206ENSMUST00000222544 Atxn3Q9CVD2 355 aa17■□□□□ 0.31
Trim27-206ENSMUST00000222544 4933402E13RikQ9D4D2 429 aa17■□□□□ 0.31
Trim27-206ENSMUST00000222544 Rnf214Q8BFU3 668 aaKnown RBP16.99■□□□□ 0.31
Trim27-206ENSMUST00000222544 Ankrd26Q811D2 1581 aa16.99■□□□□ 0.31
Trim27-206ENSMUST00000222544 Pdcl3Q8BVF2 240 aa16.99■□□□□ 0.31
Trim27-206ENSMUST00000222544 Atl3Q91YH5 541 aa16.99■□□□□ 0.31
Trim27-206ENSMUST00000222544 Mrc2Q64449 1479 aa16.99■□□□□ 0.31
Trim27-206ENSMUST00000222544 Phactr2B1AVP0 632 aa16.98■□□□□ 0.31
Trim27-206ENSMUST00000222544 PtmsQ9D0J8 101 aaKnown RBP16.98■□□□□ 0.31
Trim27-206ENSMUST00000222544 Samd1D3YXK1 519 aa16.97■□□□□ 0.31
Trim27-206ENSMUST00000222544 Cog6Q8R3I3 657 aa16.97■□□□□ 0.31
Trim27-206ENSMUST00000222544 Q9D2X8 372 aa16.97■□□□□ 0.31
Trim27-206ENSMUST00000222544 ErbinQ80TH2 1402 aa16.97■□□□□ 0.31
Trim27-206ENSMUST00000222544 Becn1O88597 448 aa16.97■□□□□ 0.31
Trim27-206ENSMUST00000222544 HdgfP51859 237 aaKnown RBP16.96■□□□□ 0.31
Trim27-206ENSMUST00000222544 Rprd2Q6NXI6 1469 aaKnown RBP16.96■□□□□ 0.31
Trim27-206ENSMUST00000222544 Ssh1Q76I79 1042 aa16.96■□□□□ 0.31
Trim27-206ENSMUST00000222544 Clstn1Q9EPL2 979 aa16.96■□□□□ 0.31
Trim27-206ENSMUST00000222544 Ush1cQ9ES64 910 aa16.96■□□□□ 0.31
Trim27-206ENSMUST00000222544 Iffo2Q8R2V2 512 aa16.95■□□□□ 0.3
Trim27-206ENSMUST00000222544 Usp16Q99LG0 825 aa16.95■□□□□ 0.3
Trim27-206ENSMUST00000222544 Sptbn5F6UCX4 1208 aa16.95■□□□□ 0.3
Trim27-206ENSMUST00000222544 Ubap1lG3UW59 384 aa16.94■□□□□ 0.3
Trim27-206ENSMUST00000222544 Stk31Q99MW1 1018 aa16.94■□□□□ 0.3
Trim27-206ENSMUST00000222544 Sall3Q62255 1320 aa16.94■□□□□ 0.3
Trim27-206ENSMUST00000222544 Fgd6Q69ZL1 1399 aa16.94■□□□□ 0.3
Trim27-206ENSMUST00000222544 MecomP14404 1042 aa16.93■□□□□ 0.3
Trim27-206ENSMUST00000222544 Slc4a10Q5DTL9 1118 aa16.93■□□□□ 0.3
Trim27-206ENSMUST00000222544 Smc5Q8CG46 1101 aaKnown RBP16.93■□□□□ 0.3
Trim27-206ENSMUST00000222544 Kiaa0754Q69ZZ9 979 aa16.93■□□□□ 0.3
Trim27-206ENSMUST00000222544 Dusp27Q148W8 1138 aa16.93■□□□□ 0.3
Trim27-206ENSMUST00000222544 SkilQ60665 675 aa16.93■□□□□ 0.3
Trim27-206ENSMUST00000222544 Ric3Q8BPM6 367 aa16.92■□□□□ 0.3
Trim27-206ENSMUST00000222544 Filip1lQ6P6L0 1131 aa16.92■□□□□ 0.3
Trim27-206ENSMUST00000222544 Il16O54824 1322 aa16.92■□□□□ 0.3
Trim27-206ENSMUST00000222544 Kank1E9Q238 1360 aa16.91■□□□□ 0.3
Trim27-206ENSMUST00000222544 Cgnl1Q6AW69 1298 aa16.91■□□□□ 0.3
Trim27-206ENSMUST00000222544 Paxip1Q6NZQ4 1056 aa16.91■□□□□ 0.3
Trim27-206ENSMUST00000222544 PogkQ80TC5 607 aa16.91■□□□□ 0.3
Trim27-206ENSMUST00000222544 Mug1P28665 1476 aa16.91■□□□□ 0.3
Trim27-206ENSMUST00000222544 Ap3b2Q9JME5 1082 aa16.9■□□□□ 0.3
Trim27-206ENSMUST00000222544 Kif18aQ91WD7 886 aa16.9■□□□□ 0.3
Trim27-206ENSMUST00000222544 Nsd2Q8BVE8 1365 aa16.9■□□□□ 0.3
Trim27-206ENSMUST00000222544 Q8BT18 775 aa16.89■□□□□ 0.29
Trim27-206ENSMUST00000222544 Gm1043A0A140LJC2 1431 aa16.89■□□□□ 0.29
Trim27-206ENSMUST00000222544 Polr3gQ6NXY9 223 aa16.89■□□□□ 0.29
Trim27-206ENSMUST00000222544 Rbm10Q99KG3 930 aaKnown RBP16.88■□□□□ 0.29
Trim27-206ENSMUST00000222544 Adam1bQ8R534 806 aa16.88■□□□□ 0.29
Trim27-206ENSMUST00000222544 St18Q80TY4 1045 aa16.88■□□□□ 0.29
Trim27-206ENSMUST00000222544 Tfip11Q9ERA6 838 aaKnown RBP16.87■□□□□ 0.29
Trim27-206ENSMUST00000222544 Trim30aP15533 496 aa16.87■□□□□ 0.29
Trim27-206ENSMUST00000222544 Utp3Q9JI13 469 aaKnown RBP16.87■□□□□ 0.29
Trim27-206ENSMUST00000222544 Swt1Q9DBQ9 907 aa16.86■□□□□ 0.29
Trim27-206ENSMUST00000222544 Plb1Q3TTY0 1478 aa16.85■□□□□ 0.29
Trim27-206ENSMUST00000222544 Sf3a1Q8K4Z5 791 aaKnown RBP16.85■□□□□ 0.29
Trim27-206ENSMUST00000222544 Cabp4Q8VHC5 271 aa16.85■□□□□ 0.29
Trim27-206ENSMUST00000222544 Q9D9H8 365 aa16.85■□□□□ 0.29
Trim27-206ENSMUST00000222544 Fbxo2Q80UW2 297 aa16.85■□□□□ 0.29
Trim27-206ENSMUST00000222544 PnnO35691 725 aaKnown RBP16.85■□□□□ 0.29
Trim27-206ENSMUST00000222544 Arhgap5P97393 1501 aa16.84■□□□□ 0.29
Trim27-206ENSMUST00000222544 Atp6v1dP57746 247 aa16.84■□□□□ 0.29
Trim27-206ENSMUST00000222544 Q4VA45 678 aa16.84■□□□□ 0.29
Trim27-206ENSMUST00000222544 Ppp1r9bQ6R891 817 aaKnown RBP16.84■□□□□ 0.29
Trim27-206ENSMUST00000222544 Atp2b2Q9R0K7 1198 aa16.84■□□□□ 0.29
Trim27-206ENSMUST00000222544 Maco1Q7TQE6 664 aaKnown RBP16.83■□□□□ 0.29
Trim27-206ENSMUST00000222544 Gripap1Q8VD04 806 aa16.83■□□□□ 0.29
Trim27-206ENSMUST00000222544 Pip4k2bQ80XI4 416 aa16.83■□□□□ 0.28
Retrieved 100 of 22,080 RNA–protein pairs in 16.8 ms