RNA–Protein interactions for RNA: ENSMUST00000199896.1

Smarcc1-207, Transcript of SWI/SNF complex subunit SMARCC1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Smarcc1, Length 5,773 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc1-207ENSMUST00000199896 Kri1Q8VDQ9 704 aaKnown RBP22.04■■□□□ 1.12
Smarcc1-207ENSMUST00000199896 Q8C5K5 320 aa22.04■■□□□ 1.12
Smarcc1-207ENSMUST00000199896 Rsph3aQ3UFY4 516 aa22.03■■□□□ 1.12
Smarcc1-207ENSMUST00000199896 BcanQ61361 883 aa22.02■■□□□ 1.12
Smarcc1-207ENSMUST00000199896 Nectin2P32507 530 aa22.02■■□□□ 1.12
Smarcc1-207ENSMUST00000199896 Map3k5O35099 1380 aa22.02■■□□□ 1.12
Smarcc1-207ENSMUST00000199896 Trim58Q5NCC9 485 aa22.01■■□□□ 1.11
Smarcc1-207ENSMUST00000199896 Rpgrip1lQ8CG73 1264 aa22.01■■□□□ 1.11
Smarcc1-207ENSMUST00000199896 Gnai1B2RSH2 354 aa22.01■■□□□ 1.11
Smarcc1-207ENSMUST00000199896 Gnai3Q9DC51 354 aa22.01■■□□□ 1.11
Smarcc1-207ENSMUST00000199896 Cplx2P84086 134 aa22.01■■□□□ 1.11
Smarcc1-207ENSMUST00000199896 Gm10471E9Q1C7 252 aa22.01■■□□□ 1.11
Smarcc1-207ENSMUST00000199896 Nap1l3Q794H2 544 aa22.01■■□□□ 1.11
Smarcc1-207ENSMUST00000199896 Cfdp1O88271 295 aaKnown RBP22■■□□□ 1.11
Smarcc1-207ENSMUST00000199896 Urb2E9Q7L1 1524 aaKnown RBP22■■□□□ 1.11
Smarcc1-207ENSMUST00000199896 Prdm16A2A935 1275 aa22■■□□□ 1.11
Smarcc1-207ENSMUST00000199896 Eva1cP58659 440 aa22■■□□□ 1.11
Smarcc1-207ENSMUST00000199896 Rfx1P48377 963 aa21.99■■□□□ 1.11
Smarcc1-207ENSMUST00000199896 Tpm3P21107 285 aaKnown RBP21.99■■□□□ 1.11
Smarcc1-207ENSMUST00000199896 Ccdc30Q8BVF4 654 aa21.99■■□□□ 1.11
Smarcc1-207ENSMUST00000199896 PnisrA2AJT4 805 aaKnown RBP21.98■■□□□ 1.11
Smarcc1-207ENSMUST00000199896 Zpr1Q62384 459 aa21.98■■□□□ 1.11
Smarcc1-207ENSMUST00000199896 Swt1Q9DBQ9 907 aa21.98■■□□□ 1.11
Smarcc1-207ENSMUST00000199896 Kiaa0754Q69ZZ9 979 aa21.98■■□□□ 1.11
Smarcc1-207ENSMUST00000199896 Efcab5A0JP43 1406 aa21.97■■□□□ 1.11
Smarcc1-207ENSMUST00000199896 Rbm25B2RY56 838 aaKnown RBP21.97■■□□□ 1.11
Smarcc1-207ENSMUST00000199896 Ddx11Q6AXC6 880 aa21.97■■□□□ 1.11
Smarcc1-207ENSMUST00000199896 CrcpO35427 148 aa21.97■■□□□ 1.11
Smarcc1-207ENSMUST00000199896 FanciQ8K368 1330 aa21.97■■□□□ 1.11
Smarcc1-207ENSMUST00000199896 Nutm1Q8BHP2 1126 aa21.96■■□□□ 1.11
Smarcc1-207ENSMUST00000199896 Sh3bgrQ9WUZ7 214 aa21.96■■□□□ 1.11
Smarcc1-207ENSMUST00000199896 Phactr2B1AVP0 632 aa21.95■■□□□ 1.1
Smarcc1-207ENSMUST00000199896 Cspp1B2RX88 1205 aa21.95■■□□□ 1.1
Smarcc1-207ENSMUST00000199896 Cux1P53564 1515 aa21.94■■□□□ 1.1
Smarcc1-207ENSMUST00000199896 Casq1O09165 405 aa21.94■■□□□ 1.1
Smarcc1-207ENSMUST00000199896 Ccp110Q7TSH4 1004 aa21.94■■□□□ 1.1
Smarcc1-207ENSMUST00000199896 Chmp4cQ9D7F7 232 aa21.94■■□□□ 1.1
Smarcc1-207ENSMUST00000199896 Q9D2X8 372 aa21.93■■□□□ 1.1
Smarcc1-207ENSMUST00000199896 Zranb3Q6NZP1 1069 aa21.93■■□□□ 1.1
Smarcc1-207ENSMUST00000199896 NexnQ7TPW1 607 aa21.93■■□□□ 1.1
Smarcc1-207ENSMUST00000199896 Evi5lH3BKQ3 813 aa21.93■■□□□ 1.1
Smarcc1-207ENSMUST00000199896 Sv2bQ8BG39 683 aa21.93■■□□□ 1.1
Smarcc1-207ENSMUST00000199896 Tnnt2P50752 301 aa21.92■■□□□ 1.1
Smarcc1-207ENSMUST00000199896 ScribQ80U72 1612 aa21.92■■□□□ 1.1
Smarcc1-207ENSMUST00000199896 Pank1Q8K4K6 548 aa21.92■■□□□ 1.1
Smarcc1-207ENSMUST00000199896 Rnf20Q5DTM8 973 aa21.91■■□□□ 1.1
Smarcc1-207ENSMUST00000199896 Evc2Q8K1G2 1220 aa21.91■■□□□ 1.1
Smarcc1-207ENSMUST00000199896 Arhgap5P97393 1501 aa21.91■■□□□ 1.1
Smarcc1-207ENSMUST00000199896 KinQ8K339 391 aa21.91■■□□□ 1.1
Smarcc1-207ENSMUST00000199896 Cplx1P63040 134 aa21.91■■□□□ 1.1
Smarcc1-207ENSMUST00000199896 Ak7Q9D2H2 614 aa21.91■■□□□ 1.1
Smarcc1-207ENSMUST00000199896 Sf3b2Q3UJB0 878 aaKnown RBP21.9■■□□□ 1.1
Smarcc1-207ENSMUST00000199896 Srek1Q8BZX4 494 aaKnown RBP21.9■■□□□ 1.1
Smarcc1-207ENSMUST00000199896 Hmox1P14901 289 aa21.9■■□□□ 1.1
Smarcc1-207ENSMUST00000199896 Trim30aP15533 496 aa21.89■■□□□ 1.1
Smarcc1-207ENSMUST00000199896 Arhgap31A6X8Z5 1425 aa21.89■■□□□ 1.09
Smarcc1-207ENSMUST00000199896 Mphosph10Q810V0 681 aaKnown RBP21.89■■□□□ 1.09
Smarcc1-207ENSMUST00000199896 Polr3gQ6NXY9 223 aa21.88■■□□□ 1.09
Smarcc1-207ENSMUST00000199896 Cd109Q8R422 1442 aa21.88■■□□□ 1.09
Smarcc1-207ENSMUST00000199896 Top2aQ01320 1528 aaKnown RBP21.87■■□□□ 1.09
Smarcc1-207ENSMUST00000199896 Rrp12Q6P5B0 1295 aaKnown RBP21.87■■□□□ 1.09
Smarcc1-207ENSMUST00000199896 FosbP13346 338 aa21.86■■□□□ 1.09
Smarcc1-207ENSMUST00000199896 Erc2Q6PH08 957 aa21.86■■□□□ 1.09
Smarcc1-207ENSMUST00000199896 Polr1aO35134 1717 aaKnown RBP21.86■■□□□ 1.09
Smarcc1-207ENSMUST00000199896 Ankrd36D3Z4K0 1415 aa21.86■■□□□ 1.09
Smarcc1-207ENSMUST00000199896 Afap1Q80YS6 731 aa21.85■■□□□ 1.09
Smarcc1-207ENSMUST00000199896 PhaxQ9JJT9 385 aaKnown RBP21.85■■□□□ 1.09
Smarcc1-207ENSMUST00000199896 Ddx54Q8K4L0 874 aaKnown RBP21.85■■□□□ 1.09
Smarcc1-207ENSMUST00000199896 Ift140E9PY46 1464 aa21.85■■□□□ 1.09
Smarcc1-207ENSMUST00000199896 Tpm4Q6IRU2 248 aa21.85■■□□□ 1.09
Smarcc1-207ENSMUST00000199896 Bicd2Q921C5 820 aa21.85■■□□□ 1.09
Smarcc1-207ENSMUST00000199896 Bcl11aQ9QYE3 773 aa21.85■■□□□ 1.09
Smarcc1-207ENSMUST00000199896 Sytl4Q9R0Q1 673 aa21.85■■□□□ 1.09
Smarcc1-207ENSMUST00000199896 Tpm2P58774 284 aa21.84■■□□□ 1.09
Smarcc1-207ENSMUST00000199896 MpripP97434 1024 aa21.84■■□□□ 1.09
Smarcc1-207ENSMUST00000199896 Gabpb2P81069 414 aa21.84■■□□□ 1.09
Smarcc1-207ENSMUST00000199896 Smg7Q5RJH6 1138 aaKnown RBP21.84■■□□□ 1.09
Smarcc1-207ENSMUST00000199896 Gnl3lQ6PGG6 577 aaKnown RBP21.84■■□□□ 1.09
Smarcc1-207ENSMUST00000199896 Noc3lQ8VI84 807 aaKnown RBP21.84■■□□□ 1.09
Smarcc1-207ENSMUST00000199896 Utp3Q9JI13 469 aaKnown RBP21.84■■□□□ 1.09
Smarcc1-207ENSMUST00000199896 Tpm1P58771 284 aa21.83■■□□□ 1.09
Smarcc1-207ENSMUST00000199896 Q7TT23 1179 aa21.83■■□□□ 1.08
Smarcc1-207ENSMUST00000199896 HypkQ9CR41 129 aa21.83■■□□□ 1.08
Smarcc1-207ENSMUST00000199896 Kif16bB1AVY7 1312 aa21.82■■□□□ 1.08
Smarcc1-207ENSMUST00000199896 Rec8Q8C5S7 591 aa21.82■■□□□ 1.08
Smarcc1-207ENSMUST00000199896 Duox2A2AQ99 1517 aa21.82■■□□□ 1.08
Smarcc1-207ENSMUST00000199896 Smc3Q9CW03 1217 aaKnown RBP21.82■■□□□ 1.08
Smarcc1-207ENSMUST00000199896 Wdr78E9PYY5 807 aa21.82■■□□□ 1.08
Smarcc1-207ENSMUST00000199896 Rbm5Q91YE7 815 aaKnown RBP21.82■■□□□ 1.08
Smarcc1-207ENSMUST00000199896 Cnnm1Q0GA42 951 aa21.81■■□□□ 1.08
Smarcc1-207ENSMUST00000199896 Becn1O88597 448 aa21.81■■□□□ 1.08
Smarcc1-207ENSMUST00000199896 Odf2A3KGV1 830 aaKnown RBP21.8■■□□□ 1.08
Smarcc1-207ENSMUST00000199896 KarsQ99MN1 595 aaKnown RBP21.8■■□□□ 1.08
Smarcc1-207ENSMUST00000199896 Vps8Q0P5W1 1427 aa21.79■■□□□ 1.08
Smarcc1-207ENSMUST00000199896 Apaf1O88879 1249 aa21.79■■□□□ 1.08
Smarcc1-207ENSMUST00000199896 Ccdc43Q9CR29 222 aaKnown RBP21.79■■□□□ 1.08
Smarcc1-207ENSMUST00000199896 Glipr1l2Q9CQ35 332 aa21.79■■□□□ 1.08
Smarcc1-207ENSMUST00000199896 Stk3Q9JI10 497 aa21.79■■□□□ 1.08
Smarcc1-207ENSMUST00000199896 Fgd6Q69ZL1 1399 aa21.78■■□□□ 1.08
Smarcc1-207ENSMUST00000199896 AampJ3QN89 436 aa21.78■■□□□ 1.08
Retrieved 100 of 22,080 RNA–protein pairs in 9.7 ms