RNA–Protein interactions for RNA: ENSMUST00000197488.4

Csde1-206, Transcript of Cold shock domain-containing protein E1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Csde1, Length 3,827 nt, Biotype protein coding, Subcellular localisation Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Csde1-206ENSMUST00000197488 Mfap1aC0HKD8 439 aaKnown RBP8.35□□□□□ -1.07
Csde1-206ENSMUST00000197488 Mfap1bC0HKD9 439 aaKnown RBP8.35□□□□□ -1.07
Csde1-206ENSMUST00000197488 Ksr2Q3UVC0 959 aa8.35□□□□□ -1.07
Csde1-206ENSMUST00000197488 Dnttip2Q8R2M2 758 aaKnown RBP8.35□□□□□ -1.07
Csde1-206ENSMUST00000197488 Rab3gap2Q8BMG7 1366 aa8.35□□□□□ -1.07
Csde1-206ENSMUST00000197488 Shroom2A2ALU4 1481 aa8.34□□□□□ -1.07
Csde1-206ENSMUST00000197488 Kif3bQ61771 747 aa8.34□□□□□ -1.07
Csde1-206ENSMUST00000197488 Usp40Q8BWR4 1235 aa8.34□□□□□ -1.07
Csde1-206ENSMUST00000197488 Smc5Q8CG46 1101 aaKnown RBP8.34□□□□□ -1.07
Csde1-206ENSMUST00000197488 Kdm2bQ6P1G2 1309 aa8.34□□□□□ -1.07
Csde1-206ENSMUST00000197488 Mapk8ip3Q9ESN9 1337 aa8.34□□□□□ -1.07
Csde1-206ENSMUST00000197488 Ssh2Q5SW75 1423 aa8.34□□□□□ -1.07
Csde1-206ENSMUST00000197488 Trappc8E9PWG2 1437 aa8.33□□□□□ -1.08
Csde1-206ENSMUST00000197488 DekQ7TNV0 380 aaKnown RBP8.33□□□□□ -1.08
Csde1-206ENSMUST00000197488 Adamts12Q811B3 1600 aa8.33□□□□□ -1.08
Csde1-206ENSMUST00000197488 U2af1Q9D883 239 aaKnown RBP8.33□□□□□ -1.08
Csde1-206ENSMUST00000197488 Apaf1O88879 1249 aa8.33□□□□□ -1.08
Csde1-206ENSMUST00000197488 Ak9G3UYQ4 1894 aa8.33□□□□□ -1.08
Csde1-206ENSMUST00000197488 Arhgef11Q68FM7 1552 aa8.32□□□□□ -1.08
Csde1-206ENSMUST00000197488 Cpsf1Q9EPU4 1441 aaKnown RBP8.32□□□□□ -1.08
Csde1-206ENSMUST00000197488 Plcb2A3KGF7 1181 aa8.32□□□□□ -1.08
Csde1-206ENSMUST00000197488 Stag3O70576 1240 aa8.32□□□□□ -1.08
Csde1-206ENSMUST00000197488 Arhgap5P97393 1501 aa8.32□□□□□ -1.08
Csde1-206ENSMUST00000197488 Arid3cA6PWV5 409 aa8.31□□□□□ -1.08
Csde1-206ENSMUST00000197488 Tnpo1Q8BFY9 898 aaKnown RBP8.31□□□□□ -1.08
Csde1-206ENSMUST00000197488 Htatsf1Q8BGC0 757 aa8.31□□□□□ -1.08
Csde1-206ENSMUST00000197488 Fam135aQ6NS59 1506 aa8.31□□□□□ -1.08
Csde1-206ENSMUST00000197488 Neo1P97798 1493 aa8.31□□□□□ -1.08
Csde1-206ENSMUST00000197488 Ipo4Q8VI75 1082 aa8.3□□□□□ -1.08
Csde1-206ENSMUST00000197488 Stk26Q99JT2 416 aa8.3□□□□□ -1.08
Csde1-206ENSMUST00000197488 Pnmal2G3X9N3 661 aa8.3□□□□□ -1.08
Csde1-206ENSMUST00000197488 Nutm1Q8BHP2 1126 aa8.3□□□□□ -1.08
Csde1-206ENSMUST00000197488 Lamc1P02468 1607 aaKnown RBP8.29□□□□□ -1.08
Csde1-206ENSMUST00000197488 Fgd1P52734 960 aa8.29□□□□□ -1.08
Csde1-206ENSMUST00000197488 Rlbp1Q9Z275 317 aa8.29□□□□□ -1.08
Csde1-206ENSMUST00000197488 Mlh3A0A1Y7VMP7 1443 aa8.29□□□□□ -1.08
Csde1-206ENSMUST00000197488 Trim58Q5NCC9 485 aa8.29□□□□□ -1.08
Csde1-206ENSMUST00000197488 Mink1Q9JM52 1308 aa8.29□□□□□ -1.08
Csde1-206ENSMUST00000197488 Abca16E9PWJ7 1678 aa8.28□□□□□ -1.08
Csde1-206ENSMUST00000197488 Dot1lQ6XZL8 1540 aa8.28□□□□□ -1.08
Csde1-206ENSMUST00000197488 TnikP83510 1323 aa8.28□□□□□ -1.08
Csde1-206ENSMUST00000197488 Duxf3A0A0N4SV92 674 aa8.28□□□□□ -1.08
Csde1-206ENSMUST00000197488 Taok2Q6ZQ29 1240 aa8.28□□□□□ -1.08
Csde1-206ENSMUST00000197488 Tmco5bQ80X59 307 aa8.28□□□□□ -1.08
Csde1-206ENSMUST00000197488 GsdmaQ9EST1 446 aa8.28□□□□□ -1.08
Csde1-206ENSMUST00000197488 Rfx1P48377 963 aa8.27□□□□□ -1.09
Csde1-206ENSMUST00000197488 Ralbp1Q62172 648 aa8.27□□□□□ -1.09
Csde1-206ENSMUST00000197488 Tsen2Q6P7W5 460 aa8.27□□□□□ -1.09
Csde1-206ENSMUST00000197488 GorabQ8BRM2 368 aa8.27□□□□□ -1.09
Csde1-206ENSMUST00000197488 Exosc9Q9JHI7 438 aaKnown RBP8.27□□□□□ -1.09
Csde1-206ENSMUST00000197488 Ppp1r9bQ6R891 817 aaKnown RBP8.27□□□□□ -1.09
Csde1-206ENSMUST00000197488 Ppp1r3fQ9JIG4 799 aa8.27□□□□□ -1.09
Csde1-206ENSMUST00000197488 Kiaa1551Q5DTW7 1521 aa8.27□□□□□ -1.09
Csde1-206ENSMUST00000197488 PtprgQ05909 1442 aa8.27□□□□□ -1.09
Csde1-206ENSMUST00000197488 Plin1Q8CGN5 517 aa8.27□□□□□ -1.09
Csde1-206ENSMUST00000197488 Kdm5cP41230 1554 aa8.26□□□□□ -1.09
Csde1-206ENSMUST00000197488 AU015836B2RUM3 263 aa8.26□□□□□ -1.09
Csde1-206ENSMUST00000197488 Zranb1Q7M760 708 aa8.26□□□□□ -1.09
Csde1-206ENSMUST00000197488 Pknox2Q8BG99 474 aa8.26□□□□□ -1.09
Csde1-206ENSMUST00000197488 Rtn4Q99P72 1162 aaKnown RBP8.26□□□□□ -1.09
Csde1-206ENSMUST00000197488 Cdc42bpaQ3UU96 1719 aa8.26□□□□□ -1.09
Csde1-206ENSMUST00000197488 Tarbp1E9Q368 1579 aa8.26□□□□□ -1.09
Csde1-206ENSMUST00000197488 Nectin2P32507 530 aa8.26□□□□□ -1.09
Csde1-206ENSMUST00000197488 Kif21bQ9QXL1 1668 aa8.26□□□□□ -1.09
Csde1-206ENSMUST00000197488 Tex14Q7M6U3 1450 aa8.26□□□□□ -1.09
Csde1-206ENSMUST00000197488 Ppp2r3aB2RXC8 1150 aa8.25□□□□□ -1.09
Csde1-206ENSMUST00000197488 DroshaQ5HZJ0 1373 aaKnown RBP8.25□□□□□ -1.09
Csde1-206ENSMUST00000197488 Caskin1Q6P9K8 1431 aa8.25□□□□□ -1.09
Csde1-206ENSMUST00000197488 SlkO54988 1233 aa8.25□□□□□ -1.09
Csde1-206ENSMUST00000197488 Aplp1Q03157 653 aa8.25□□□□□ -1.09
Csde1-206ENSMUST00000197488 Lrrc9Q8CDN9 1456 aa8.24□□□□□ -1.09
Csde1-206ENSMUST00000197488 Nup160Q9Z0W3 1402 aaKnown RBP8.24□□□□□ -1.09
Csde1-206ENSMUST00000197488 Ylpm1Q9R0I7 1386 aaKnown RBP8.24□□□□□ -1.09
Csde1-206ENSMUST00000197488 Sptbn5F6UCX4 1208 aa8.24□□□□□ -1.09
Csde1-206ENSMUST00000197488 Puf60Q3UEB3 564 aaKnown RBP8.24□□□□□ -1.09
Csde1-206ENSMUST00000197488 Mapkbp1Q6NS57 1503 aa8.24□□□□□ -1.09
Csde1-206ENSMUST00000197488 Stk11ipQ3TAA7 1072 aa8.24□□□□□ -1.09
Csde1-206ENSMUST00000197488 Ccdc60Q8C4J0 545 aa8.24□□□□□ -1.09
Csde1-206ENSMUST00000197488 Uspl1Q3ULM6 1089 aa8.24□□□□□ -1.09
Csde1-206ENSMUST00000197488 Abcc2Q8VI47 1543 aa8.24□□□□□ -1.09
Csde1-206ENSMUST00000197488 Usp19Q3UJD6 1360 aa8.23□□□□□ -1.09
Csde1-206ENSMUST00000197488 Mroh2aD3Z750 1679 aa8.23□□□□□ -1.09
Csde1-206ENSMUST00000197488 Gm16486A0A1D5RMD1 1434 aa8.23□□□□□ -1.09
Csde1-206ENSMUST00000197488 Rabep1O35551 862 aa8.23□□□□□ -1.09
Csde1-206ENSMUST00000197488 IqubQ8CDK3 788 aa8.23□□□□□ -1.09
Csde1-206ENSMUST00000197488 Ccar1Q8CH18 1146 aaKnown RBP8.23□□□□□ -1.09
Csde1-206ENSMUST00000197488 Plch2A2AP18 1501 aa8.22□□□□□ -1.09
Csde1-206ENSMUST00000197488 Trpm2Q91YD4 1506 aa8.22□□□□□ -1.09
Csde1-206ENSMUST00000197488 1700019A02RikA0A087WPV9 146 aa8.22□□□□□ -1.09
Csde1-206ENSMUST00000197488 ErbinQ80TH2 1402 aa8.22□□□□□ -1.09
Csde1-206ENSMUST00000197488 Dusp27Q148W8 1138 aa8.21□□□□□ -1.1
Csde1-206ENSMUST00000197488 Cog6Q8R3I3 657 aa8.21□□□□□ -1.1
Csde1-206ENSMUST00000197488 Nsd2Q8BVE8 1365 aa8.21□□□□□ -1.1
Csde1-206ENSMUST00000197488 Ssh1Q76I79 1042 aa8.21□□□□□ -1.1
Csde1-206ENSMUST00000197488 Fancd2Q80V62 1450 aa8.21□□□□□ -1.1
Csde1-206ENSMUST00000197488 Catsper2A2ARP9 588 aa8.2□□□□□ -1.1
Csde1-206ENSMUST00000197488 Q4VA45 678 aa8.2□□□□□ -1.1
Csde1-206ENSMUST00000197488 Kiaa1107Q80TK0 1369 aa8.2□□□□□ -1.1
Csde1-206ENSMUST00000197488 Prdm16A2A935 1275 aa8.2□□□□□ -1.1
Csde1-206ENSMUST00000197488 AU019823E9PUQ3 292 aa8.2□□□□□ -1.1
Retrieved 100 of 22,080 RNA–protein pairs in 14.3 ms