RNA–Protein interactions for RNA: ENSMUST00000193675.1

Vim-206, Transcript of Vimentin, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Vim, Length 1,777 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vim-206ENSMUST00000193675 Itsn1Q9Z0R4 1714 aa27.15■■□□□ 1.94
Vim-206ENSMUST00000193675 Uggt1Q6P5E4 1551 aa27.15■■□□□ 1.94
Vim-206ENSMUST00000193675 Scaf11E9PZM7 1456 aaKnown RBP27.14■■□□□ 1.94
Vim-206ENSMUST00000193675 Naip7Q9JIB3 1402 aa27.13■■□□□ 1.93
Vim-206ENSMUST00000193675 Sall3Q62255 1320 aa27.13■■□□□ 1.93
Vim-206ENSMUST00000193675 Nop58Q6DFW4 536 aaKnown RBP27.12■■□□□ 1.93
Vim-206ENSMUST00000193675 Ncoa1P70365 1447 aa27.12■■□□□ 1.93
Vim-206ENSMUST00000193675 Pik3c2gO70167 1506 aa27.1■■□□□ 1.93
Vim-206ENSMUST00000193675 AatkQ80YE4 1365 aa27.08■■□□□ 1.93
Vim-206ENSMUST00000193675 Abca8aQ8K442 1620 aa27.08■■□□□ 1.92
Vim-206ENSMUST00000193675 P3h3Q8CG70 732 aa27.07■■□□□ 1.92
Vim-206ENSMUST00000193675 Psme1P97371 249 aa27.07■■□□□ 1.92
Vim-206ENSMUST00000193675 Prrc2bQ7TPM1 1486 aaKnown RBP27.07■■□□□ 1.92
Vim-206ENSMUST00000193675 Phlpp1Q8CHE4 1687 aa27.06■■□□□ 1.92
Vim-206ENSMUST00000193675 Rims2Q9EQZ7 1530 aa27.04■■□□□ 1.92
Vim-206ENSMUST00000193675 Mroh1E0CZ22 1640 aa27.04■■□□□ 1.92
Vim-206ENSMUST00000193675 Ehbp1l1Q99MS7 1716 aa27.04■■□□□ 1.92
Vim-206ENSMUST00000193675 Ppip5k1A2ARP1 1436 aa27.04■■□□□ 1.92
Vim-206ENSMUST00000193675 Mroh3A0A1D5RM54 893 aa27.03■■□□□ 1.92
Vim-206ENSMUST00000193675 Ltbp4Q8K4G1 1666 aa27.03■■□□□ 1.92
Vim-206ENSMUST00000193675 Dot1lQ6XZL8 1540 aa27.02■■□□□ 1.92
Vim-206ENSMUST00000193675 Gm13695A2AK44 830 aa27.02■■□□□ 1.92
Vim-206ENSMUST00000193675 Gemin5Q8BX17 1502 aaKnown RBP27.01■■□□□ 1.91
Vim-206ENSMUST00000193675 Ppargc1bQ8VHJ7 1014 aa26.99■■□□□ 1.91
Vim-206ENSMUST00000193675 Rapgef3Q8VCC8 918 aa26.99■■□□□ 1.91
Vim-206ENSMUST00000193675 Hspa5P20029 655 aaKnown RBP26.98■■□□□ 1.91
Vim-206ENSMUST00000193675 Rprd2Q6NXI6 1469 aaKnown RBP26.96■■□□□ 1.91
Vim-206ENSMUST00000193675 Rock1P70335 1354 aa26.96■■□□□ 1.91
Vim-206ENSMUST00000193675 PplQ9R269 1755 aa26.94■■□□□ 1.9
Vim-206ENSMUST00000193675 Washc2Q6PGL7 1334 aa26.94■■□□□ 1.9
Vim-206ENSMUST00000193675 Usp47Q8BY87 1376 aa26.94■■□□□ 1.9
Vim-206ENSMUST00000193675 Zc3h13E9Q784 1729 aaKnown RBP26.93■■□□□ 1.9
Vim-206ENSMUST00000193675 AU022751B1B0V2 589 aa26.92■■□□□ 1.9
Vim-206ENSMUST00000193675 PalldQ9ET54 1408 aa26.9■■□□□ 1.9
Vim-206ENSMUST00000193675 Atp1b4Q99ME6 356 aa26.9■■□□□ 1.9
Vim-206ENSMUST00000193675 Lmtk3Q5XJV6 1424 aa26.9■■□□□ 1.9
Vim-206ENSMUST00000193675 Rgl3Q3UYI5 709 aa26.89■■□□□ 1.89
Vim-206ENSMUST00000193675 Iqgap1Q9JKF1 1657 aaKnown RBP26.88■■□□□ 1.89
Vim-206ENSMUST00000193675 Nrxn3Q6P9K9 1571 aa26.88■■□□□ 1.89
Vim-206ENSMUST00000193675 Eif2ak4Q9QZ05 1648 aa26.87■■□□□ 1.89
Vim-206ENSMUST00000193675 Myo3aQ8K3H5 1613 aa26.86■■□□□ 1.89
Vim-206ENSMUST00000193675 IghaA0A0A6YXW6 389 aa26.86■■□□□ 1.89
Vim-206ENSMUST00000193675 Arhgef28P97433 1693 aa26.81■■□□□ 1.88
Vim-206ENSMUST00000193675 Shq1Q7TMX5 569 aa26.8■■□□□ 1.88
Vim-206ENSMUST00000193675 Asxl2Q8BZ32 1370 aa26.79■■□□□ 1.88
Vim-206ENSMUST00000193675 Med1Q925J9 1575 aa26.79■■□□□ 1.88
Vim-206ENSMUST00000193675 Q9D9H8 365 aa26.79■■□□□ 1.88
Vim-206ENSMUST00000193675 Plxnc1Q9QZC2 1574 aa26.78■■□□□ 1.88
Vim-206ENSMUST00000193675 PzpQ61838 1495 aa26.76■■□□□ 1.87
Vim-206ENSMUST00000193675 Slit3Q9WVB4 1523 aa26.76■■□□□ 1.87
Vim-206ENSMUST00000193675 Ifit1bl1D3Z6F0 470 aa26.76■■□□□ 1.87
Vim-206ENSMUST00000193675 Tulp4Q9JIL5 1547 aa26.75■■□□□ 1.87
Vim-206ENSMUST00000193675 Myom1Q62234 1667 aaKnown RBP26.75■■□□□ 1.87
Vim-206ENSMUST00000193675 Setd1aE9PYH6 1716 aa26.75■■□□□ 1.87
Vim-206ENSMUST00000193675 Gli3Q61602 1583 aa26.74■■□□□ 1.87
Vim-206ENSMUST00000193675 Rims1Q99NE5 1463 aa26.74■■□□□ 1.87
Vim-206ENSMUST00000193675 Adamts13Q769J6 1426 aa26.73■■□□□ 1.87
Vim-206ENSMUST00000193675 Kdm2aP59997 1161 aa26.72■■□□□ 1.87
Vim-206ENSMUST00000193675 Slc52a2Q9D8F3 450 aa26.72■■□□□ 1.87
Vim-206ENSMUST00000193675 Tubgcp6G5E8P0 1769 aa26.71■■□□□ 1.87
Vim-206ENSMUST00000193675 Srpk2O54781 681 aaKnown RBP26.69■■□□□ 1.86
Vim-206ENSMUST00000193675 Grwd1Q810D6 446 aaKnown RBP26.69■■□□□ 1.86
Vim-206ENSMUST00000193675 Os9Q8K2C7 672 aa26.68■■□□□ 1.86
Vim-206ENSMUST00000193675 Pik3r4Q8VD65 1358 aa26.66■■□□□ 1.86
Vim-206ENSMUST00000193675 Gm20521D3Z5F7 333 aa26.64■■□□□ 1.86
Vim-206ENSMUST00000193675 Thsd7aQ69ZU6 1645 aa26.64■■□□□ 1.85
Vim-206ENSMUST00000193675 Fan1Q69ZT1 1020 aa26.63■■□□□ 1.85
Vim-206ENSMUST00000193675 Cep152A2AUM9 1736 aaKnown RBP26.6■■□□□ 1.85
Vim-206ENSMUST00000193675 Puf60Q3UEB3 564 aaKnown RBP26.58■■□□□ 1.85
Vim-206ENSMUST00000193675 HnrnpmQ9D0E1 729 aaKnown RBP26.58■■□□□ 1.85
Vim-206ENSMUST00000193675 Cdk13Q69ZA1 1511 aaKnown RBP26.57■■□□□ 1.84
Vim-206ENSMUST00000193675 Stk26Q99JT2 416 aa26.56■■□□□ 1.84
Vim-206ENSMUST00000193675 Polr3aB2RXC6 1390 aa26.56■■□□□ 1.84
Vim-206ENSMUST00000193675 Tns3Q5SSZ5 1440 aa26.56■■□□□ 1.84
Vim-206ENSMUST00000193675 Utp14aQ640M1 767 aaKnown RBP26.55■■□□□ 1.84
Vim-206ENSMUST00000193675 MaddQ80U28 1577 aa26.55■■□□□ 1.84
Vim-206ENSMUST00000193675 Arap3Q8R5G7 1538 aa26.54■■□□□ 1.84
Vim-206ENSMUST00000193675 Fbxo41Q6NS60 873 aa26.53■■□□□ 1.84
Vim-206ENSMUST00000193675 Slain2Q8CI08 581 aa26.5■■□□□ 1.83
Vim-206ENSMUST00000193675 Cpsf1Q9EPU4 1441 aaKnown RBP26.49■■□□□ 1.83
Vim-206ENSMUST00000193675 Hspa1lP16627 641 aa26.49■■□□□ 1.83
Vim-206ENSMUST00000193675 Amigo3Q8C2S7 508 aa26.49■■□□□ 1.83
Vim-206ENSMUST00000193675 Col18a1P39061 1774 aa26.48■■□□□ 1.83
Vim-206ENSMUST00000193675 Cdk5rap2Q8K389 1822 aa26.48■■□□□ 1.83
Vim-206ENSMUST00000193675 Mbd5B1AYB6 1498 aa26.46■■□□□ 1.83
Vim-206ENSMUST00000193675 Csrnp3P59055 597 aa26.46■■□□□ 1.83
Vim-206ENSMUST00000193675 Lrrc7Q80TE7 1490 aa26.46■■□□□ 1.83
Vim-206ENSMUST00000193675 Evi5lH3BKQ3 813 aa26.45■■□□□ 1.82
Vim-206ENSMUST00000193675 IqubQ8CDK3 788 aa26.45■■□□□ 1.82
Vim-206ENSMUST00000193675 Tmem94Q7TSH8 1360 aa26.44■■□□□ 1.82
Vim-206ENSMUST00000193675 Cps1Q8C196 1500 aa26.44■■□□□ 1.82
Vim-206ENSMUST00000193675 Smg6P61406 1418 aaKnown RBP26.43■■□□□ 1.82
Vim-206ENSMUST00000193675 Bcl11bQ99PV8 884 aa26.43■■□□□ 1.82
Vim-206ENSMUST00000193675 Usp40Q8BWR4 1235 aa26.42■■□□□ 1.82
Vim-206ENSMUST00000193675 Mug2P28666 1451 aa26.41■■□□□ 1.82
Vim-206ENSMUST00000193675 Iqsec2Q5DU25 1478 aa26.41■■□□□ 1.82
Vim-206ENSMUST00000193675 Stra8P70278 393 aa26.41■■□□□ 1.82
Vim-206ENSMUST00000193675 Sin3aQ60520 1274 aaKnown RBP26.41■■□□□ 1.82
Vim-206ENSMUST00000193675 Mapk8ip2Q9ERE9 830 aa26.4■■□□□ 1.82
Vim-206ENSMUST00000193675 Ift172Q6VH22 1749 aa26.39■■□□□ 1.82
Retrieved 100 of 22,080 RNA–protein pairs in 14.7 ms