RNA–Protein interactions for RNA: ENSMUST00000193675.1

Vim-206, Transcript of Vimentin, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Vim, Length 1,777 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vim-206ENSMUST00000193675 Gm35339A0A140LHH9 1649 aa41.44■■■■■ 4.22
Vim-206ENSMUST00000193675 NischQ80TM9 1593 aa41.08■■■■■ 4.17
Vim-206ENSMUST00000193675 Abcc9P70170 1546 aa39.73■■■■□ 3.95
Vim-206ENSMUST00000193675 Abcc8B2RUS7 1588 aa39.63■■■■□ 3.93
Vim-206ENSMUST00000193675 ScribQ80U72 1612 aa38.01■■■■□ 3.68
Vim-206ENSMUST00000193675 NacadQ5SWP3 1504 aa36.94■■■■□ 3.5
Vim-206ENSMUST00000193675 Kdm5dQ62240 1548 aa36.84■■■■□ 3.49
Vim-206ENSMUST00000193675 Dcaf1Q80TR8 1506 aa36.56■■■■□ 3.44
Vim-206ENSMUST00000193675 Sycp2Q9CUU3 1500 aa36.18■■■■□ 3.38
Vim-206ENSMUST00000193675 Rhox8Q6VSS7 320 aa35.87■■■■□ 3.33
Vim-206ENSMUST00000193675 Rb1cc1Q9ESK9 1588 aa35.8■■■■□ 3.32
Vim-206ENSMUST00000193675 BicraF8VPZ9 1578 aa35.61■■■■□ 3.29
Vim-206ENSMUST00000193675 Ccdc180J3QNE4 1664 aa35.33■■■■□ 3.25
Vim-206ENSMUST00000193675 Baz1aO88379 1555 aa35.32■■■■□ 3.24
Vim-206ENSMUST00000193675 Crybg2B7ZCC2 1516 aa35.22■■■■□ 3.23
Vim-206ENSMUST00000193675 Zcchc6Q5BLK4 1491 aaKnown RBP34.8■■■■□ 3.16
Vim-206ENSMUST00000193675 Pds5bQ4VA53 1446 aaKnown RBP34.65■■■■□ 3.14
Vim-206ENSMUST00000193675 Atad2bE9Q166 1460 aaKnown RBP34.36■■■■□ 3.09
Vim-206ENSMUST00000193675 Dnajc5bQ9CQ94 199 aa34.35■■■■□ 3.09
Vim-206ENSMUST00000193675 Smarca2Q6DIC0 1577 aa34.29■■■■□ 3.08
Vim-206ENSMUST00000193675 Rtl1Q7M732 1744 aa34.17■■■■□ 3.06
Vim-206ENSMUST00000193675 Thoc2B1AZI6 1594 aaKnown RBP34.16■■■■□ 3.06
Vim-206ENSMUST00000193675 Smarca4Q3TKT4 1613 aaKnown RBP34.13■■■■□ 3.05
Vim-206ENSMUST00000193675 Cecr2E9Q2Z1 1453 aa34.13■■■■□ 3.05
Vim-206ENSMUST00000193675 Iqgap2Q3UQ44 1575 aa33.91■■■■□ 3.02
Vim-206ENSMUST00000193675 Ercc6F8VPZ5 1481 aa33.89■■■■□ 3.02
Vim-206ENSMUST00000193675 Cc2d2aQ8CFW7 1633 aa33.67■■■□□ 2.98
Vim-206ENSMUST00000193675 Wdr62Q3U3T8 1523 aa33.57■■■□□ 2.96
Vim-206ENSMUST00000193675 Frmpd1A2AKB4 1549 aa33.55■■■□□ 2.96
Vim-206ENSMUST00000193675 Ccdc136Q3TVA9 1136 aa33.53■■■□□ 2.96
Vim-206ENSMUST00000193675 Fam135aQ6NS59 1506 aa33.46■■■□□ 2.95
Vim-206ENSMUST00000193675 Brd4Q9ESU6 1400 aaKnown RBP33.43■■■□□ 2.94
Vim-206ENSMUST00000193675 CftrP26361 1476 aa33.41■■■□□ 2.94
Vim-206ENSMUST00000193675 Phldb1Q6PDH0 1371 aaKnown RBP33.38■■■□□ 2.93
Vim-206ENSMUST00000193675 Synj1Q8CHC4 1574 aa33.33■■■□□ 2.93
Vim-206ENSMUST00000193675 Cttnbp2B9EJA2 1648 aa33.33■■■□□ 2.93
Vim-206ENSMUST00000193675 Baz1bQ9Z277 1479 aa33.13■■■□□ 2.89
Vim-206ENSMUST00000193675 Ubl4bQ9CQ84 188 aa33.12■■■□□ 2.89
Vim-206ENSMUST00000193675 Trim41Q5NCC3 630 aa33.07■■■□□ 2.88
Vim-206ENSMUST00000193675 Unc13aQ4KUS2 1712 aa33.03■■■□□ 2.88
Vim-206ENSMUST00000193675 Esf1Q3V1V3 845 aaKnown RBP32.96■■■□□ 2.87
Vim-206ENSMUST00000193675 Mrc2Q64449 1479 aa32.72■■■□□ 2.83
Vim-206ENSMUST00000193675 Rsf1E9PWW9 1441 aaKnown RBP32.57■■■□□ 2.8
Vim-206ENSMUST00000193675 Kif15Q6P9L6 1387 aa32.48■■■□□ 2.79
Vim-206ENSMUST00000193675 Cux2P70298 1426 aa32.4■■■□□ 2.78
Vim-206ENSMUST00000193675 Lamc3Q9R0B6 1581 aa32.36■■■□□ 2.77
Vim-206ENSMUST00000193675 Golga3P55937 1487 aa32.32■■■□□ 2.76
Vim-206ENSMUST00000193675 Cngb1E1AZ71 1325 aa32.26■■■□□ 2.75
Vim-206ENSMUST00000193675 Top2bQ64511 1612 aa32.2■■■□□ 2.74
Vim-206ENSMUST00000193675 Npm1Q61937 292 aaKnown RBP32.17■■■□□ 2.74
Vim-206ENSMUST00000193675 TnnQ80Z71 1560 aa32.03■■■□□ 2.72
Vim-206ENSMUST00000193675 Kif21aQ9QXL2 1672 aa32.01■■■□□ 2.71
Vim-206ENSMUST00000193675 Cep164Q5DU05 1446 aa32.01■■■□□ 2.71
Vim-206ENSMUST00000193675 Lrriq1Q0P5X1 1673 aa31.95■■■□□ 2.7
Vim-206ENSMUST00000193675 Ccdc18Q640L5 1455 aa31.94■■■□□ 2.7
Vim-206ENSMUST00000193675 Il27Q8K3I6 234 aa31.91■■■□□ 2.7
Vim-206ENSMUST00000193675 Fmn1Q05860 1466 aa31.9■■■□□ 2.7
Vim-206ENSMUST00000193675 Camsap1A2AHC3 1581 aa31.79■■■□□ 2.68
Vim-206ENSMUST00000193675 LrpprcQ6PB66 1392 aaKnown RBP31.74■■■□□ 2.67
Vim-206ENSMUST00000193675 Dhx29Q6PGC1 1365 aaKnown RBP31.74■■■□□ 2.67
Vim-206ENSMUST00000193675 HrcG5E8J6 738 aa31.67■■■□□ 2.66
Vim-206ENSMUST00000193675 Urb2E9Q7L1 1524 aaKnown RBP31.57■■■□□ 2.64
Vim-206ENSMUST00000193675 Plb1Q3TTY0 1478 aa31.57■■■□□ 2.64
Vim-206ENSMUST00000193675 PogzQ8BZH4 1409 aaKnown RBP31.54■■■□□ 2.64
Vim-206ENSMUST00000193675 Crocc2F6XLV1 1638 aa31.54■■■□□ 2.64
Vim-206ENSMUST00000193675 Ccdc88bQ4QRL3 1481 aa31.51■■■□□ 2.63
Vim-206ENSMUST00000193675 Eif4g3Q80XI3 1579 aaKnown RBP31.49■■■□□ 2.63
Vim-206ENSMUST00000193675 Grin2bQ01097 1482 aa31.42■■■□□ 2.62
Vim-206ENSMUST00000193675 Duox2A2AQ99 1517 aa31.41■■■□□ 2.62
Vim-206ENSMUST00000193675 Chic1Q8CBW7 227 aa31.38■■■□□ 2.61
Vim-206ENSMUST00000193675 Ift140E9PY46 1464 aa31.31■■■□□ 2.6
Vim-206ENSMUST00000193675 Top2aQ01320 1528 aaKnown RBP31.29■■■□□ 2.6
Vim-206ENSMUST00000193675 Efcab5A0JP43 1406 aa31.26■■■□□ 2.59
Vim-206ENSMUST00000193675 NrkQ9R0G8 1455 aa31.16■■■□□ 2.58
Vim-206ENSMUST00000193675 Disp1Q3TDN0 1521 aa31.13■■■□□ 2.57
Vim-206ENSMUST00000193675 Samd9lQ69Z37 1561 aa31.09■■■□□ 2.57
Vim-206ENSMUST00000193675 Rusc2Q80U22 1514 aa31.08■■■□□ 2.57
Vim-206ENSMUST00000193675 Shroom4Q1W617 1475 aa31■■■□□ 2.55
Vim-206ENSMUST00000193675 Shroom2A2ALU4 1481 aa31■■■□□ 2.55
Vim-206ENSMUST00000193675 PtprkP35822 1457 aa30.98■■■□□ 2.55
Vim-206ENSMUST00000193675 Nup160Q9Z0W3 1402 aaKnown RBP30.97■■■□□ 2.55
Vim-206ENSMUST00000193675 Pbrm1Q8BSQ9 1634 aaKnown RBP30.96■■■□□ 2.55
Vim-206ENSMUST00000193675 Rad54l2Q99NG0 1466 aa30.95■■■□□ 2.54
Vim-206ENSMUST00000193675 Cc2d2bA0A286YDU8 1405 aa30.94■■■□□ 2.54
Vim-206ENSMUST00000193675 Setd1bQ8CFT2 1985 aa30.9■■■□□ 2.54
Vim-206ENSMUST00000193675 Dnajc5P60904 198 aa30.88■■■□□ 2.53
Vim-206ENSMUST00000193675 Pabpn1Q8CCS6 302 aaKnown RBP30.85■■■□□ 2.53
Vim-206ENSMUST00000193675 Grin2aP35436 1464 aa30.83■■■□□ 2.53
Vim-206ENSMUST00000193675 Magi3Q9EQJ9 1476 aa30.82■■■□□ 2.52
Vim-206ENSMUST00000193675 Rpgrip1Q9EPQ2 1331 aa30.82■■■□□ 2.52
Vim-206ENSMUST00000193675 Zeb1Q64318 1117 aa30.79■■■□□ 2.52
Vim-206ENSMUST00000193675 Npm2Q80W85 207 aa30.77■■■□□ 2.52
Vim-206ENSMUST00000193675 SynmQ70IV5 1561 aa30.75■■■□□ 2.51
Vim-206ENSMUST00000193675 AqrQ8CFQ3 1481 aaKnown RBP30.7■■■□□ 2.51
Vim-206ENSMUST00000193675 Pelp1Q9DBD5 1123 aaKnown RBP30.68■■■□□ 2.5
Vim-206ENSMUST00000193675 Pla2r1Q62028 1487 aa30.67■■■□□ 2.5
Vim-206ENSMUST00000193675 Gab3Q8BSM5 595 aa30.66■■■□□ 2.5
Vim-206ENSMUST00000193675 Mroh2bQ7M6Y6 1581 aa30.62■■■□□ 2.49
Vim-206ENSMUST00000193675 Fgd6Q69ZL1 1399 aa30.59■■■□□ 2.49
Vim-206ENSMUST00000193675 Gpatch8A2A6A1 1505 aa30.57■■■□□ 2.48
Retrieved 100 of 22,080 RNA–protein pairs in 265 ms