RNA–Protein interactions for RNA: ENSMUST00000176216.8

Cux1-207, Transcript of Homeobox protein cut-like 1, mousemouse

TSL 1 (best) BASIC

Gene Cux1, Length 2,821 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cux1-207ENSMUST00000176216 Rab3gap2Q8BMG7 1366 aa13.59□□□□□ -0.23
Cux1-207ENSMUST00000176216 Rnf17Q99MV7 1640 aa13.59□□□□□ -0.23
Cux1-207ENSMUST00000176216 CanxP35564 591 aaKnown RBP13.59□□□□□ -0.23
Cux1-207ENSMUST00000176216 Robo2Q7TPD3 1470 aa13.58□□□□□ -0.23
Cux1-207ENSMUST00000176216 Fgd6Q69ZL1 1399 aa13.58□□□□□ -0.24
Cux1-207ENSMUST00000176216 Cep170Q6A065 1588 aa13.58□□□□□ -0.24
Cux1-207ENSMUST00000176216 Sbno1Q689Z5 1390 aa13.58□□□□□ -0.24
Cux1-207ENSMUST00000176216 Gas2l2Q5SSG4 860 aa13.57□□□□□ -0.24
Cux1-207ENSMUST00000176216 Kif7B7ZNG0 1348 aa13.57□□□□□ -0.24
Cux1-207ENSMUST00000176216 Pdcd11Q6NS46 1862 aaKnown RBP13.57□□□□□ -0.24
Cux1-207ENSMUST00000176216 Gm14025A2AP89 1413 aa13.56□□□□□ -0.24
Cux1-207ENSMUST00000176216 Arid4bA2CG63 1314 aaKnown RBP13.56□□□□□ -0.24
Cux1-207ENSMUST00000176216 Ttc41Q692V3 1318 aa13.56□□□□□ -0.24
Cux1-207ENSMUST00000176216 Chmp5Q9D7S9 219 aa13.56□□□□□ -0.24
Cux1-207ENSMUST00000176216 Sart3Q9JLI8 962 aaKnown RBP13.56□□□□□ -0.24
Cux1-207ENSMUST00000176216 Prdm16A2A935 1275 aa13.56□□□□□ -0.24
Cux1-207ENSMUST00000176216 Tspyl2Q7TQI8 677 aa13.55□□□□□ -0.24
Cux1-207ENSMUST00000176216 Ccdc30Q8BVF4 654 aa13.55□□□□□ -0.24
Cux1-207ENSMUST00000176216 Dcaf11Q91VU6 549 aa13.55□□□□□ -0.24
Cux1-207ENSMUST00000176216 Gm20521D3Z5F7 333 aa13.55□□□□□ -0.24
Cux1-207ENSMUST00000176216 DaxxO35613 739 aa13.55□□□□□ -0.24
Cux1-207ENSMUST00000176216 Plekhh1Q80TI1 1356 aa13.55□□□□□ -0.24
Cux1-207ENSMUST00000176216 Stk24Q99KH8 431 aa13.54□□□□□ -0.24
Cux1-207ENSMUST00000176216 EspnQ9ET47 871 aa13.54□□□□□ -0.24
Cux1-207ENSMUST00000176216 Mbd3Q9Z2D8 285 aaKnown RBP13.54□□□□□ -0.24
Cux1-207ENSMUST00000176216 Abcc3B2RX12 1523 aa13.54□□□□□ -0.24
Cux1-207ENSMUST00000176216 Cfap74Q3UY96 1578 aa13.54□□□□□ -0.24
Cux1-207ENSMUST00000176216 Usp54Q8BL06 1588 aaKnown RBP13.54□□□□□ -0.24
Cux1-207ENSMUST00000176216 Nlrp6Q91WS2 869 aa13.54□□□□□ -0.24
Cux1-207ENSMUST00000176216 Usp19Q3UJD6 1360 aa13.54□□□□□ -0.24
Cux1-207ENSMUST00000176216 Abcc6Q9R1S7 1498 aa13.54□□□□□ -0.24
Cux1-207ENSMUST00000176216 Cnga1P29974 684 aa13.53□□□□□ -0.24
Cux1-207ENSMUST00000176216 Fan1Q69ZT1 1020 aa13.53□□□□□ -0.24
Cux1-207ENSMUST00000176216 Neurl4Q5NCX5 1563 aa13.53□□□□□ -0.24
Cux1-207ENSMUST00000176216 ShprhQ7TPQ3 1674 aa13.53□□□□□ -0.24
Cux1-207ENSMUST00000176216 NudcO35685 332 aaKnown RBP13.52□□□□□ -0.25
Cux1-207ENSMUST00000176216 Kif3bQ61771 747 aa13.52□□□□□ -0.25
Cux1-207ENSMUST00000176216 Znf608Q56A10 1511 aa13.52□□□□□ -0.25
Cux1-207ENSMUST00000176216 Atf7ipQ7TT18 1306 aa13.52□□□□□ -0.25
Cux1-207ENSMUST00000176216 Nsd2Q8BVE8 1365 aa13.51□□□□□ -0.25
Cux1-207ENSMUST00000176216 Clasp1Q80TV8 1535 aaKnown RBP13.51□□□□□ -0.25
Cux1-207ENSMUST00000176216 Usp40Q8BWR4 1235 aa13.51□□□□□ -0.25
Cux1-207ENSMUST00000176216 Smc5Q8CG46 1101 aaKnown RBP13.51□□□□□ -0.25
Cux1-207ENSMUST00000176216 Atp10dQ8K2X1 1416 aa13.51□□□□□ -0.25
Cux1-207ENSMUST00000176216 Gtf2e1Q9D0D5 440 aa13.5□□□□□ -0.25
Cux1-207ENSMUST00000176216 Pola1P33609 1465 aa13.5□□□□□ -0.25
Cux1-207ENSMUST00000176216 Col17a1Q07563 1470 aa13.5□□□□□ -0.25
Cux1-207ENSMUST00000176216 4930567H17RikQ3V0K5 233 aa13.49□□□□□ -0.25
Cux1-207ENSMUST00000176216 Kif1bQ60575 1816 aaKnown RBP13.49□□□□□ -0.25
Cux1-207ENSMUST00000176216 Pank1Q8K4K6 548 aa13.49□□□□□ -0.25
Cux1-207ENSMUST00000176216 NhsB1AV60 1647 aa13.49□□□□□ -0.25
Cux1-207ENSMUST00000176216 Hecw1Q8K4P8 1604 aa13.48□□□□□ -0.25
Cux1-207ENSMUST00000176216 4933416C03RikQ3V063 378 aa13.48□□□□□ -0.25
Cux1-207ENSMUST00000176216 Dnai1Q8C0M8 701 aa13.48□□□□□ -0.25
Cux1-207ENSMUST00000176216 Golga2Q921M4 999 aa13.48□□□□□ -0.25
Cux1-207ENSMUST00000176216 Kiaa1107Q80TK0 1369 aa13.48□□□□□ -0.25
Cux1-207ENSMUST00000176216 Srpk2O54781 681 aaKnown RBP13.46□□□□□ -0.25
Cux1-207ENSMUST00000176216 Eif2s2Q99L45 331 aaKnown RBP13.46□□□□□ -0.25
Cux1-207ENSMUST00000176216 Atxn3Q9CVD2 355 aa13.46□□□□□ -0.25
Cux1-207ENSMUST00000176216 Kidins220E9Q9B7 1793 aa13.46□□□□□ -0.25
Cux1-207ENSMUST00000176216 Abcc1O35379 1528 aa13.46□□□□□ -0.25
Cux1-207ENSMUST00000176216 Trim30dE9PWL0 497 aa13.46□□□□□ -0.25
Cux1-207ENSMUST00000176216 Gtf3c3Q3TMP1 882 aa13.46□□□□□ -0.25
Cux1-207ENSMUST00000176216 Ttc21bQ0HA38 1315 aa13.45□□□□□ -0.26
Cux1-207ENSMUST00000176216 Ak7Q9D2H2 614 aa13.45□□□□□ -0.26
Cux1-207ENSMUST00000176216 Xrn1P97789 1719 aaKnown RBP13.45□□□□□ -0.26
Cux1-207ENSMUST00000176216 Uggt2E9Q4X2 1504 aa13.44□□□□□ -0.26
Cux1-207ENSMUST00000176216 ArxO35085 564 aa13.44□□□□□ -0.26
Cux1-207ENSMUST00000176216 Uspl1Q3ULM6 1089 aa13.44□□□□□ -0.26
Cux1-207ENSMUST00000176216 Armcx1Q9CX83 456 aa13.44□□□□□ -0.26
Cux1-207ENSMUST00000176216 P2rx7Q9Z1M0 595 aa13.44□□□□□ -0.26
Cux1-207ENSMUST00000176216 Ylpm1Q9R0I7 1386 aaKnown RBP13.44□□□□□ -0.26
Cux1-207ENSMUST00000176216 Abca8bQ8K440 1620 aa13.44□□□□□ -0.26
Cux1-207ENSMUST00000176216 Irx3P81067 507 aa13.43□□□□□ -0.26
Cux1-207ENSMUST00000176216 Myo3aQ8K3H5 1613 aa13.43□□□□□ -0.26
Cux1-207ENSMUST00000176216 Rlbp1Q9Z275 317 aa13.43□□□□□ -0.26
Cux1-207ENSMUST00000176216 Ccdc9Q8VC31 543 aaKnown RBP13.42□□□□□ -0.26
Cux1-207ENSMUST00000176216 ErbinQ80TH2 1402 aa13.42□□□□□ -0.26
Cux1-207ENSMUST00000176216 Polr3glQ8R0C0 218 aa13.42□□□□□ -0.26
Cux1-207ENSMUST00000176216 Itsn2Q9Z0R6 1659 aa13.42□□□□□ -0.26
Cux1-207ENSMUST00000176216 Abca17E9PX95 1733 aa13.41□□□□□ -0.26
Cux1-207ENSMUST00000176216 Trim26Q99PN3 545 aa13.41□□□□□ -0.26
Cux1-207ENSMUST00000176216 AnkarA2RT91 1465 aa13.41□□□□□ -0.26
Cux1-207ENSMUST00000176216 Kdm5aQ3UXZ9 1690 aa13.41□□□□□ -0.26
Cux1-207ENSMUST00000176216 AatkQ80YE4 1365 aa13.4□□□□□ -0.26
Cux1-207ENSMUST00000176216 Arid3cA6PWV5 409 aa13.4□□□□□ -0.26
Cux1-207ENSMUST00000176216 Mre11Q61216 706 aa13.4□□□□□ -0.27
Cux1-207ENSMUST00000176216 Mapk8ip3Q9ESN9 1337 aa13.39□□□□□ -0.27
Cux1-207ENSMUST00000176216 Duxf3A0A0N4SV92 674 aa13.39□□□□□ -0.27
Cux1-207ENSMUST00000176216 Puf60Q3UEB3 564 aaKnown RBP13.39□□□□□ -0.27
Cux1-207ENSMUST00000176216 Ppm1gQ61074 542 aa13.39□□□□□ -0.27
Cux1-207ENSMUST00000176216 Kiaa1210E9Q0C6 1637 aa13.39□□□□□ -0.27
Cux1-207ENSMUST00000176216 Chd1P40201 1711 aa13.39□□□□□ -0.27
Cux1-207ENSMUST00000176216 Hsp90ab1P11499 724 aaKnown RBP13.39□□□□□ -0.27
Cux1-207ENSMUST00000176216 Ralbp1Q62172 648 aa13.39□□□□□ -0.27
Cux1-207ENSMUST00000176216 Ccdc183A2AJB1 534 aa13.38□□□□□ -0.27
Cux1-207ENSMUST00000176216 Plcd4Q8K3R3 807 aa13.38□□□□□ -0.27
Cux1-207ENSMUST00000176216 Ipo8Q7TMY7 1010 aa13.38□□□□□ -0.27
Cux1-207ENSMUST00000176216 Myo5cE9Q1F5 1742 aa13.37□□□□□ -0.27
Cux1-207ENSMUST00000176216 Apaf1O88879 1249 aa13.37□□□□□ -0.27
Retrieved 100 of 22,080 RNA–protein pairs in 11.2 ms