RNA–Protein interactions for RNA: ENSMUST00000168878.7

Shroom3-204, Transcript of Protein Shroom3, mousemouse

TSL 1 (best) BASIC

Gene Shroom3, Length 5,630 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom3-204ENSMUST00000168878 Smarca4Q3TKT4 1613 aaKnown RBP20.67■□□□□ 0.9
Shroom3-204ENSMUST00000168878 Phactr2B1AVP0 632 aa20.67■□□□□ 0.9
Shroom3-204ENSMUST00000168878 Cplx2P84086 134 aa20.67■□□□□ 0.9
Shroom3-204ENSMUST00000168878 Pank1Q8K4K6 548 aa20.67■□□□□ 0.9
Shroom3-204ENSMUST00000168878 Mink1Q9JM52 1308 aa20.66■□□□□ 0.9
Shroom3-204ENSMUST00000168878 Gm21969J3QJZ1 289 aa20.66■□□□□ 0.9
Shroom3-204ENSMUST00000168878 Pknox2Q8BG99 474 aa20.66■□□□□ 0.9
Shroom3-204ENSMUST00000168878 Q8BT18 775 aa20.66■□□□□ 0.9
Shroom3-204ENSMUST00000168878 Bicd2Q921C5 820 aa20.66■□□□□ 0.9
Shroom3-204ENSMUST00000168878 Tceal9Q9DD24 104 aa20.66■□□□□ 0.9
Shroom3-204ENSMUST00000168878 Tomm22Q9CPQ3 142 aa20.65■□□□□ 0.9
Shroom3-204ENSMUST00000168878 Ccdc173A0JLY1 547 aa20.65■□□□□ 0.9
Shroom3-204ENSMUST00000168878 Rnf20Q5DTM8 973 aa20.64■□□□□ 0.9
Shroom3-204ENSMUST00000168878 Q9D2X8 372 aa20.64■□□□□ 0.9
Shroom3-204ENSMUST00000168878 Smc4Q8CG47 1286 aa20.64■□□□□ 0.9
Shroom3-204ENSMUST00000168878 Smc3Q9CW03 1217 aaKnown RBP20.64■□□□□ 0.9
Shroom3-204ENSMUST00000168878 Gnai1B2RSH2 354 aa20.64■□□□□ 0.89
Shroom3-204ENSMUST00000168878 Polr3gQ6NXY9 223 aa20.64■□□□□ 0.89
Shroom3-204ENSMUST00000168878 Gnai3Q9DC51 354 aa20.64■□□□□ 0.89
Shroom3-204ENSMUST00000168878 Tdrd9Q14BI7 1383 aa20.64■□□□□ 0.89
Shroom3-204ENSMUST00000168878 AppP12023 770 aa20.64■□□□□ 0.89
Shroom3-204ENSMUST00000168878 Ric3Q8BPM6 367 aa20.64■□□□□ 0.89
Shroom3-204ENSMUST00000168878 ErbinQ80TH2 1402 aa20.64■□□□□ 0.89
Shroom3-204ENSMUST00000168878 PnisrA2AJT4 805 aaKnown RBP20.63■□□□□ 0.89
Shroom3-204ENSMUST00000168878 Ddx11Q6AXC6 880 aa20.63■□□□□ 0.89
Shroom3-204ENSMUST00000168878 Pdcl3Q8BVF2 240 aa20.63■□□□□ 0.89
Shroom3-204ENSMUST00000168878 Evc2Q8K1G2 1220 aa20.63■□□□□ 0.89
Shroom3-204ENSMUST00000168878 Hmgn5Q9JL35 406 aa20.63■□□□□ 0.89
Shroom3-204ENSMUST00000168878 Ggt6Q6PDE7 497 aa20.63■□□□□ 0.89
Shroom3-204ENSMUST00000168878 Ncoa2Q61026 1462 aa20.63■□□□□ 0.89
Shroom3-204ENSMUST00000168878 Gabpb2P81069 414 aa20.62■□□□□ 0.89
Shroom3-204ENSMUST00000168878 Tpm2P58774 284 aa20.62■□□□□ 0.89
Shroom3-204ENSMUST00000168878 Usp16Q99LG0 825 aa20.62■□□□□ 0.89
Shroom3-204ENSMUST00000168878 A0A1L1SQF0 893 aa20.61■□□□□ 0.89
Shroom3-204ENSMUST00000168878 Dhx29Q6PGC1 1365 aaKnown RBP20.61■□□□□ 0.89
Shroom3-204ENSMUST00000168878 Nsd2Q8BVE8 1365 aa20.61■□□□□ 0.89
Shroom3-204ENSMUST00000168878 Ipo7Q9EPL8 1038 aaKnown RBP20.61■□□□□ 0.89
Shroom3-204ENSMUST00000168878 PrkcshO08795 521 aa20.61■□□□□ 0.89
Shroom3-204ENSMUST00000168878 Ccdc34Q3UI66 367 aa20.6■□□□□ 0.89
Shroom3-204ENSMUST00000168878 Rbm25B2RY56 838 aaKnown RBP20.59■□□□□ 0.89
Shroom3-204ENSMUST00000168878 BccipQ9CWI3 316 aa20.59■□□□□ 0.89
Shroom3-204ENSMUST00000168878 Swt1Q9DBQ9 907 aa20.59■□□□□ 0.89
Shroom3-204ENSMUST00000168878 Slc4a2P13808 1237 aaKnown RBP20.59■□□□□ 0.89
Shroom3-204ENSMUST00000168878 Tpm4Q6IRU2 248 aa20.59■□□□□ 0.89
Shroom3-204ENSMUST00000168878 Ppp2r3aB2RXC8 1150 aa20.59■□□□□ 0.89
Shroom3-204ENSMUST00000168878 Drc7Q6V3W6 876 aa20.59■□□□□ 0.89
Shroom3-204ENSMUST00000168878 Rec8Q8C5S7 591 aa20.58■□□□□ 0.89
Shroom3-204ENSMUST00000168878 Ftsj3Q9DBE9 838 aaKnown RBP20.58■□□□□ 0.88
Shroom3-204ENSMUST00000168878 EzrP26040 586 aaKnown RBP20.58■□□□□ 0.88
Shroom3-204ENSMUST00000168878 Pak3Q61036 559 aa20.57■□□□□ 0.88
Shroom3-204ENSMUST00000168878 Nek4Q9Z1J2 792 aa20.57■□□□□ 0.88
Shroom3-204ENSMUST00000168878 PhaxQ9JJT9 385 aaKnown RBP20.56■□□□□ 0.88
Shroom3-204ENSMUST00000168878 Cplx1P63040 134 aa20.55■□□□□ 0.88
Shroom3-204ENSMUST00000168878 PogkQ80TC5 607 aa20.55■□□□□ 0.88
Shroom3-204ENSMUST00000168878 Hmox1P14901 289 aa20.55■□□□□ 0.88
Shroom3-204ENSMUST00000168878 Erc2Q6PH08 957 aa20.55■□□□□ 0.88
Shroom3-204ENSMUST00000168878 Dixdc1Q80Y83 711 aa20.55■□□□□ 0.88
Shroom3-204ENSMUST00000168878 Mcm2P97310 904 aa20.54■□□□□ 0.88
Shroom3-204ENSMUST00000168878 SkilQ60665 675 aa20.54■□□□□ 0.88
Shroom3-204ENSMUST00000168878 Cchcr1Q8K2I2 770 aa20.54■□□□□ 0.88
Shroom3-204ENSMUST00000168878 Zfp444Q3TDV8 331 aaKnown RBP20.54■□□□□ 0.88
Shroom3-204ENSMUST00000168878 Krt82Q99M74 516 aa20.54■□□□□ 0.88
Shroom3-204ENSMUST00000168878 Plcd4Q8K3R3 807 aa20.54■□□□□ 0.88
Shroom3-204ENSMUST00000168878 Ift140E9PY46 1464 aa20.53■□□□□ 0.88
Shroom3-204ENSMUST00000168878 Gpatch3Q8BIY1 525 aa20.53■□□□□ 0.88
Shroom3-204ENSMUST00000168878 Ccdc171E9Q1U1 1324 aa20.53■□□□□ 0.88
Shroom3-204ENSMUST00000168878 Q7TT23 1179 aa20.52■□□□□ 0.88
Shroom3-204ENSMUST00000168878 Nectin2P32507 530 aa20.52■□□□□ 0.88
Shroom3-204ENSMUST00000168878 1700010I14RikQ7TPG0 532 aa20.52■□□□□ 0.88
Shroom3-204ENSMUST00000168878 Hook1Q8BIL5 728 aa20.52■□□□□ 0.88
Shroom3-204ENSMUST00000168878 Cyp46a1Q9WVK8 500 aa20.52■□□□□ 0.88
Shroom3-204ENSMUST00000168878 Gsto1O09131 240 aa20.52■□□□□ 0.87
Shroom3-204ENSMUST00000168878 Kif3aP28741 701 aa20.52■□□□□ 0.87
Shroom3-204ENSMUST00000168878 Tnpo1Q8BFY9 898 aaKnown RBP20.51■□□□□ 0.87
Shroom3-204ENSMUST00000168878 Kri1Q8VDQ9 704 aaKnown RBP20.51■□□□□ 0.87
Shroom3-204ENSMUST00000168878 Mad1l1Q9WTX8 717 aaKnown RBP20.51■□□□□ 0.87
Shroom3-204ENSMUST00000168878 Ppp2r1aQ76MZ3 589 aa20.51■□□□□ 0.87
Shroom3-204ENSMUST00000168878 Chmp4cQ9D7F7 232 aa20.51■□□□□ 0.87
Shroom3-204ENSMUST00000168878 Gm21190A0A0G2JGJ6 266 aa20.5■□□□□ 0.87
Shroom3-204ENSMUST00000168878 Rab3gap2Q8BMG7 1366 aa20.5■□□□□ 0.87
Shroom3-204ENSMUST00000168878 Nutm1Q8BHP2 1126 aa20.5■□□□□ 0.87
Shroom3-204ENSMUST00000168878 Chmp7Q8R1T1 451 aa20.5■□□□□ 0.87
Shroom3-204ENSMUST00000168878 Shroom4Q1W617 1475 aa20.5■□□□□ 0.87
Shroom3-204ENSMUST00000168878 Washc2Q6PGL7 1334 aa20.5■□□□□ 0.87
Shroom3-204ENSMUST00000168878 NaspQ99MD9 773 aaKnown RBP20.5■□□□□ 0.87
Shroom3-204ENSMUST00000168878 Ints3Q7TPD0 1041 aaKnown RBP20.49■□□□□ 0.87
Shroom3-204ENSMUST00000168878 Rnf214Q8BFU3 668 aaKnown RBP20.49■□□□□ 0.87
Shroom3-204ENSMUST00000168878 Znhit6Q3UFB2 460 aaKnown RBP20.49■□□□□ 0.87
Shroom3-204ENSMUST00000168878 Ubxn4Q8VCH8 506 aa20.49■□□□□ 0.87
Shroom3-204ENSMUST00000168878 Top2aQ01320 1528 aaKnown RBP20.49■□□□□ 0.87
Shroom3-204ENSMUST00000168878 Polr1aO35134 1717 aaKnown RBP20.48■□□□□ 0.87
Shroom3-204ENSMUST00000168878 Jph4Q80WT0 628 aa20.48■□□□□ 0.87
Shroom3-204ENSMUST00000168878 Isy1Q69ZQ2 285 aaKnown RBP20.48■□□□□ 0.87
Shroom3-204ENSMUST00000168878 Vps53Q8CCB4 832 aa20.48■□□□□ 0.87
Shroom3-204ENSMUST00000168878 Puf60Q3UEB3 564 aaKnown RBP20.47■□□□□ 0.87
Shroom3-204ENSMUST00000168878 Naip1Q9QWK5 1403 aa20.47■□□□□ 0.87
Shroom3-204ENSMUST00000168878 Samd1D3YXK1 519 aa20.47■□□□□ 0.87
Shroom3-204ENSMUST00000168878 Ncapd3Q6ZQK0 1506 aa20.47■□□□□ 0.87
Shroom3-204ENSMUST00000168878 Zfp644E9QA22 1323 aa20.47■□□□□ 0.87
Shroom3-204ENSMUST00000168878 Zrsr2Q62377 462 aaKnown RBP20.46■□□□□ 0.87
Retrieved 100 of 22,080 RNA–protein pairs in 16 ms