RNA–Protein interactions for RNA: ENSMUST00000131029.1

Gm28050-202, mousemouse

TSL 1 (best) BASIC

Gene Gm28050, Length 663 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28050-202ENSMUST00000131029 Rims2Q9EQZ7 1530 aa29.51■■■□□ 2.32
Gm28050-202ENSMUST00000131029 Ltbp4Q8K4G1 1666 aa29.5■■■□□ 2.31
Gm28050-202ENSMUST00000131029 Psme1P97371 249 aa29.5■■■□□ 2.31
Gm28050-202ENSMUST00000131029 Ehbp1l1Q99MS7 1716 aa29.49■■■□□ 2.31
Gm28050-202ENSMUST00000131029 Dot1lQ6XZL8 1540 aa29.47■■■□□ 2.31
Gm28050-202ENSMUST00000131029 P3h3Q8CG70 732 aa29.46■■■□□ 2.31
Gm28050-202ENSMUST00000131029 Rapgef3Q8VCC8 918 aa29.46■■■□□ 2.31
Gm28050-202ENSMUST00000131029 Rprd2Q6NXI6 1469 aaKnown RBP29.46■■■□□ 2.31
Gm28050-202ENSMUST00000131029 Lmtk3Q5XJV6 1424 aa29.45■■■□□ 2.31
Gm28050-202ENSMUST00000131029 Mroh3A0A1D5RM54 893 aa29.45■■■□□ 2.31
Gm28050-202ENSMUST00000131029 Eid3Q3V124 375 aa29.45■■■□□ 2.31
Gm28050-202ENSMUST00000131029 Rock1P70335 1354 aa29.44■■■□□ 2.3
Gm28050-202ENSMUST00000131029 Gm13695A2AK44 830 aa29.41■■■□□ 2.3
Gm28050-202ENSMUST00000131029 PplQ9R269 1755 aa29.41■■■□□ 2.3
Gm28050-202ENSMUST00000131029 Zc3h13E9Q784 1729 aaKnown RBP29.4■■■□□ 2.3
Gm28050-202ENSMUST00000131029 PalldQ9ET54 1408 aa29.39■■■□□ 2.3
Gm28050-202ENSMUST00000131029 AU022751B1B0V2 589 aa29.37■■■□□ 2.29
Gm28050-202ENSMUST00000131029 Washc2Q6PGL7 1334 aa29.37■■■□□ 2.29
Gm28050-202ENSMUST00000131029 Usp47Q8BY87 1376 aa29.36■■■□□ 2.29
Gm28050-202ENSMUST00000131029 Nrxn3Q6P9K9 1571 aa29.35■■■□□ 2.29
Gm28050-202ENSMUST00000131029 Eif2ak4Q9QZ05 1648 aa29.33■■■□□ 2.29
Gm28050-202ENSMUST00000131029 Iqgap1Q9JKF1 1657 aaKnown RBP29.33■■■□□ 2.29
Gm28050-202ENSMUST00000131029 Myo3aQ8K3H5 1613 aa29.3■■■□□ 2.28
Gm28050-202ENSMUST00000131029 IghaA0A0A6YXW6 389 aa29.29■■■□□ 2.28
Gm28050-202ENSMUST00000131029 Hspa5P20029 655 aaKnown RBP29.29■■■□□ 2.28
Gm28050-202ENSMUST00000131029 PzpQ61838 1495 aa29.28■■■□□ 2.28
Gm28050-202ENSMUST00000131029 Med1Q925J9 1575 aa29.27■■■□□ 2.28
Gm28050-202ENSMUST00000131029 Rgl3Q3UYI5 709 aa29.27■■■□□ 2.28
Gm28050-202ENSMUST00000131029 Atp1b4Q99ME6 356 aa29.27■■■□□ 2.28
Gm28050-202ENSMUST00000131029 Arhgef28P97433 1693 aa29.25■■■□□ 2.27
Gm28050-202ENSMUST00000131029 Plxnc1Q9QZC2 1574 aa29.24■■■□□ 2.27
Gm28050-202ENSMUST00000131029 Slit3Q9WVB4 1523 aa29.23■■■□□ 2.27
Gm28050-202ENSMUST00000131029 Shq1Q7TMX5 569 aa29.2■■■□□ 2.26
Gm28050-202ENSMUST00000131029 Rims1Q99NE5 1463 aa29.2■■■□□ 2.26
Gm28050-202ENSMUST00000131029 Setd1aE9PYH6 1716 aa29.2■■■□□ 2.26
Gm28050-202ENSMUST00000131029 Gli3Q61602 1583 aa29.19■■■□□ 2.26
Gm28050-202ENSMUST00000131029 Q9D9H8 365 aa29.19■■■□□ 2.26
Gm28050-202ENSMUST00000131029 Slc52a2Q9D8F3 450 aa29.18■■■□□ 2.26
Gm28050-202ENSMUST00000131029 Myom1Q62234 1667 aaKnown RBP29.18■■■□□ 2.26
Gm28050-202ENSMUST00000131029 Asxl2Q8BZ32 1370 aa29.17■■■□□ 2.26
Gm28050-202ENSMUST00000131029 Tulp4Q9JIL5 1547 aa29.17■■■□□ 2.26
Gm28050-202ENSMUST00000131029 Adamts13Q769J6 1426 aa29.17■■■□□ 2.26
Gm28050-202ENSMUST00000131029 Ifit1bl1D3Z6F0 470 aa29.15■■■□□ 2.26
Gm28050-202ENSMUST00000131029 Pik3r4Q8VD65 1358 aa29.14■■■□□ 2.26
Gm28050-202ENSMUST00000131029 Tubgcp6G5E8P0 1769 aa29.14■■■□□ 2.26
Gm28050-202ENSMUST00000131029 Srpk2O54781 681 aaKnown RBP29.09■■■□□ 2.25
Gm28050-202ENSMUST00000131029 Kdm2aP59997 1161 aa29.09■■■□□ 2.25
Gm28050-202ENSMUST00000131029 Thsd7aQ69ZU6 1645 aa29.09■■■□□ 2.25
Gm28050-202ENSMUST00000131029 Grwd1Q810D6 446 aaKnown RBP29.06■■■□□ 2.24
Gm28050-202ENSMUST00000131029 Cep152A2AUM9 1736 aaKnown RBP29.03■■■□□ 2.24
Gm28050-202ENSMUST00000131029 Gm20521D3Z5F7 333 aa29.03■■■□□ 2.24
Gm28050-202ENSMUST00000131029 Fan1Q69ZT1 1020 aa29.02■■■□□ 2.24
Gm28050-202ENSMUST00000131029 Os9Q8K2C7 672 aa29.02■■■□□ 2.24
Gm28050-202ENSMUST00000131029 Arap3Q8R5G7 1538 aa29.02■■■□□ 2.24
Gm28050-202ENSMUST00000131029 MaddQ80U28 1577 aa29.01■■■□□ 2.23
Gm28050-202ENSMUST00000131029 Cdk13Q69ZA1 1511 aaKnown RBP29■■■□□ 2.23
Gm28050-202ENSMUST00000131029 Polr3aB2RXC6 1390 aa29■■■□□ 2.23
Gm28050-202ENSMUST00000131029 Fbxo41Q6NS60 873 aa28.99■■■□□ 2.23
Gm28050-202ENSMUST00000131029 Tns3Q5SSZ5 1440 aa28.98■■■□□ 2.23
Gm28050-202ENSMUST00000131029 Puf60Q3UEB3 564 aaKnown RBP28.98■■■□□ 2.23
Gm28050-202ENSMUST00000131029 HnrnpmQ9D0E1 729 aaKnown RBP28.98■■■□□ 2.23
Gm28050-202ENSMUST00000131029 NefmP08553 848 aa28.97■■■□□ 2.23
Gm28050-202ENSMUST00000131029 Neurod1Q60867 357 aa28.97■■■□□ 2.23
Gm28050-202ENSMUST00000131029 Utp14aQ640M1 767 aaKnown RBP28.93■■■□□ 2.22
Gm28050-202ENSMUST00000131029 Cpsf1Q9EPU4 1441 aaKnown RBP28.93■■■□□ 2.22
Gm28050-202ENSMUST00000131029 Col18a1P39061 1774 aa28.93■■■□□ 2.22
Gm28050-202ENSMUST00000131029 Iqsec2Q5DU25 1478 aa28.91■■■□□ 2.22
Gm28050-202ENSMUST00000131029 Amigo3Q8C2S7 508 aa28.91■■■□□ 2.22
Gm28050-202ENSMUST00000131029 Slain2Q8CI08 581 aa28.91■■■□□ 2.22
Gm28050-202ENSMUST00000131029 Stk26Q99JT2 416 aa28.91■■■□□ 2.22
Gm28050-202ENSMUST00000131029 Mbd5B1AYB6 1498 aa28.91■■■□□ 2.22
Gm28050-202ENSMUST00000131029 Hspa1lP16627 641 aa28.9■■■□□ 2.22
Gm28050-202ENSMUST00000131029 Cdk5rap2Q8K389 1822 aa28.87■■■□□ 2.21
Gm28050-202ENSMUST00000131029 Cps1Q8C196 1500 aa28.87■■■□□ 2.21
Gm28050-202ENSMUST00000131029 Lrrc7Q80TE7 1490 aa28.85■■■□□ 2.21
Gm28050-202ENSMUST00000131029 IqubQ8CDK3 788 aa28.84■■■□□ 2.21
Gm28050-202ENSMUST00000131029 Tmem94Q7TSH8 1360 aa28.82■■■□□ 2.2
Gm28050-202ENSMUST00000131029 Plekhg1F6S200 1446 aa28.82■■■□□ 2.2
Gm28050-202ENSMUST00000131029 Unc13bQ9Z1N9 1602 aa28.82■■■□□ 2.2
Gm28050-202ENSMUST00000131029 Acin1Q9JIX8 1338 aaKnown RBP28.81■■■□□ 2.2
Gm28050-202ENSMUST00000131029 Evi5lH3BKQ3 813 aa28.81■■■□□ 2.2
Gm28050-202ENSMUST00000131029 Usp40Q8BWR4 1235 aa28.8■■■□□ 2.2
Gm28050-202ENSMUST00000131029 Mug2P28666 1451 aa28.79■■■□□ 2.2
Gm28050-202ENSMUST00000131029 TonslQ6NZL6 1363 aa28.79■■■□□ 2.2
Gm28050-202ENSMUST00000131029 Brinp3Q499E0 766 aa28.79■■■□□ 2.2
Gm28050-202ENSMUST00000131029 Stard8Q8K031 1019 aa28.78■■■□□ 2.2
Gm28050-202ENSMUST00000131029 Bcl11bQ99PV8 884 aa28.78■■■□□ 2.2
Gm28050-202ENSMUST00000131029 Ift172Q6VH22 1749 aa28.77■■■□□ 2.2
Gm28050-202ENSMUST00000131029 Stag3O70576 1240 aa28.75■■■□□ 2.19
Gm28050-202ENSMUST00000131029 Q3UJC8 639 aa28.74■■■□□ 2.19
Gm28050-202ENSMUST00000131029 Col14a1Q80X19 1797 aa28.74■■■□□ 2.19
Gm28050-202ENSMUST00000131029 Sipa1l1Q8C0T5 1782 aa28.74■■■□□ 2.19
Gm28050-202ENSMUST00000131029 Nwd1A6H603 1563 aa28.73■■■□□ 2.19
Gm28050-202ENSMUST00000131029 Cep170bQ80U49 1574 aa28.73■■■□□ 2.19
Gm28050-202ENSMUST00000131029 Nphp4P59240 1425 aa28.71■■■□□ 2.19
Gm28050-202ENSMUST00000131029 Gtf2e1Q9D0D5 440 aa28.71■■■□□ 2.19
Gm28050-202ENSMUST00000131029 Atf3Q60765 181 aa28.7■■■□□ 2.18
Gm28050-202ENSMUST00000131029 Dapk1Q80YE7 1442 aa28.69■■■□□ 2.18
Gm28050-202ENSMUST00000131029 DnmbpQ6TXD4 1580 aa28.68■■■□□ 2.18
Gm28050-202ENSMUST00000131029 Rundc1Q0VDN7 615 aa28.68■■■□□ 2.18
Retrieved 100 of 22,080 RNA–protein pairs in 8.3 ms