RNA–Protein interactions for RNA: ENSMUST00000116375.1

Cstf1-201, Transcript of Cleavage stimulation factor subunit 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Cstf1, Length 3,451 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf1-201ENSMUST00000116375 Abcc6Q9R1S7 1498 aa14.04□□□□□ -0.16
Cstf1-201ENSMUST00000116375 Gm20521D3Z5F7 333 aa14.04□□□□□ -0.16
Cstf1-201ENSMUST00000116375 ShprhQ7TPQ3 1674 aa14.04□□□□□ -0.16
Cstf1-201ENSMUST00000116375 Kif3bQ61771 747 aa14.04□□□□□ -0.16
Cstf1-201ENSMUST00000116375 Prkrip1Q9CWV6 186 aaKnown RBP14.04□□□□□ -0.16
Cstf1-201ENSMUST00000116375 Lemd3Q9WU40 921 aa14.03□□□□□ -0.16
Cstf1-201ENSMUST00000116375 Abca17E9PX95 1733 aa14.03□□□□□ -0.16
Cstf1-201ENSMUST00000116375 Erbb3Q61526 1339 aa14.03□□□□□ -0.16
Cstf1-201ENSMUST00000116375 Rab3gap2Q8BMG7 1366 aa14.02□□□□□ -0.16
Cstf1-201ENSMUST00000116375 Pak3Q61036 559 aa14.02□□□□□ -0.16
Cstf1-201ENSMUST00000116375 Kidins220E9Q9B7 1793 aa14.02□□□□□ -0.17
Cstf1-201ENSMUST00000116375 ErbinQ80TH2 1402 aa14.01□□□□□ -0.17
Cstf1-201ENSMUST00000116375 Ppp2r1aQ76MZ3 589 aa14.01□□□□□ -0.17
Cstf1-201ENSMUST00000116375 Gtf2e1Q9D0D5 440 aa14.01□□□□□ -0.17
Cstf1-201ENSMUST00000116375 Gm16486A0A1D5RMD1 1434 aa14.01□□□□□ -0.17
Cstf1-201ENSMUST00000116375 Srpk2O54781 681 aaKnown RBP14□□□□□ -0.17
Cstf1-201ENSMUST00000116375 Atf7ipQ7TT18 1306 aa14□□□□□ -0.17
Cstf1-201ENSMUST00000116375 Pola1P33609 1465 aa14□□□□□ -0.17
Cstf1-201ENSMUST00000116375 Uggt2E9Q4X2 1504 aa13.99□□□□□ -0.17
Cstf1-201ENSMUST00000116375 Kcnh8P59111 1102 aa13.99□□□□□ -0.17
Cstf1-201ENSMUST00000116375 Ipo9Q91YE6 1041 aa13.99□□□□□ -0.17
Cstf1-201ENSMUST00000116375 Esx1O88933 382 aa13.98□□□□□ -0.17
Cstf1-201ENSMUST00000116375 TnikP83510 1323 aa13.98□□□□□ -0.17
Cstf1-201ENSMUST00000116375 Ttc21bQ0HA38 1315 aa13.98□□□□□ -0.17
Cstf1-201ENSMUST00000116375 Nlrp6Q91WS2 869 aa13.98□□□□□ -0.17
Cstf1-201ENSMUST00000116375 Ttc41Q692V3 1318 aa13.97□□□□□ -0.17
Cstf1-201ENSMUST00000116375 Kif16bB1AVY7 1312 aa13.97□□□□□ -0.17
Cstf1-201ENSMUST00000116375 Zfyve16Q80U44 1528 aa13.97□□□□□ -0.17
Cstf1-201ENSMUST00000116375 Nos1Q9Z0J4 1429 aa13.97□□□□□ -0.17
Cstf1-201ENSMUST00000116375 Stk24Q99KH8 431 aa13.96□□□□□ -0.17
Cstf1-201ENSMUST00000116375 Znf608Q56A10 1511 aa13.96□□□□□ -0.17
Cstf1-201ENSMUST00000116375 Sall3Q62255 1320 aa13.96□□□□□ -0.18
Cstf1-201ENSMUST00000116375 Xrn1P97789 1719 aaKnown RBP13.96□□□□□ -0.18
Cstf1-201ENSMUST00000116375 Ythdc2B2RR83 1445 aaKnown RBP13.96□□□□□ -0.18
Cstf1-201ENSMUST00000116375 Rwdd1Q9CQK7 243 aa13.95□□□□□ -0.18
Cstf1-201ENSMUST00000116375 Egfem1Q8C088 590 aa13.95□□□□□ -0.18
Cstf1-201ENSMUST00000116375 Znf518aB2RRF6 1478 aaKnown RBP13.95□□□□□ -0.18
Cstf1-201ENSMUST00000116375 Usp40Q8BWR4 1235 aa13.94□□□□□ -0.18
Cstf1-201ENSMUST00000116375 Cep152A2AUM9 1736 aaKnown RBP13.94□□□□□ -0.18
Cstf1-201ENSMUST00000116375 CrbnQ8C7D2 445 aa13.94□□□□□ -0.18
Cstf1-201ENSMUST00000116375 Myo5cE9Q1F5 1742 aa13.94□□□□□ -0.18
Cstf1-201ENSMUST00000116375 Itsn2Q9Z0R6 1659 aa13.94□□□□□ -0.18
Cstf1-201ENSMUST00000116375 Plekhh1Q80TI1 1356 aa13.94□□□□□ -0.18
Cstf1-201ENSMUST00000116375 Kif7B7ZNG0 1348 aa13.93□□□□□ -0.18
Cstf1-201ENSMUST00000116375 Clasp1Q80TV8 1535 aaKnown RBP13.93□□□□□ -0.18
Cstf1-201ENSMUST00000116375 Fan1Q69ZT1 1020 aa13.92□□□□□ -0.18
Cstf1-201ENSMUST00000116375 Arid3cA6PWV5 409 aa13.92□□□□□ -0.18
Cstf1-201ENSMUST00000116375 Ccdc27Q3V036 639 aa13.91□□□□□ -0.18
Cstf1-201ENSMUST00000116375 Nphp4P59240 1425 aa13.91□□□□□ -0.18
Cstf1-201ENSMUST00000116375 Dcaf11Q91VU6 549 aa13.91□□□□□ -0.18
Cstf1-201ENSMUST00000116375 Speer4f1Q9D5Q6 258 aa13.89□□□□□ -0.19
Cstf1-201ENSMUST00000116375 Col17a1Q07563 1470 aa13.89□□□□□ -0.19
Cstf1-201ENSMUST00000116375 Iqgap3F8VQ29 1632 aa13.88□□□□□ -0.19
Cstf1-201ENSMUST00000116375 Kdm5aQ3UXZ9 1690 aa13.88□□□□□ -0.19
Cstf1-201ENSMUST00000116375 Rims1Q99NE5 1463 aa13.88□□□□□ -0.19
Cstf1-201ENSMUST00000116375 Abca9Q8K449 1623 aa13.87□□□□□ -0.19
Cstf1-201ENSMUST00000116375 Abca6Q8K441 1624 aa13.87□□□□□ -0.19
Cstf1-201ENSMUST00000116375 OvosQ3UU35 1456 aa13.87□□□□□ -0.19
Cstf1-201ENSMUST00000116375 Golga2Q921M4 999 aa13.87□□□□□ -0.19
Cstf1-201ENSMUST00000116375 AatkQ80YE4 1365 aa13.86□□□□□ -0.19
Cstf1-201ENSMUST00000116375 Fndc1E9Q043 1732 aa13.86□□□□□ -0.19
Cstf1-201ENSMUST00000116375 Puf60Q3UEB3 564 aaKnown RBP13.85□□□□□ -0.19
Cstf1-201ENSMUST00000116375 Tmem131lQ3U3D7 1597 aa13.85□□□□□ -0.19
Cstf1-201ENSMUST00000116375 Ralbp1Q62172 648 aa13.85□□□□□ -0.19
Cstf1-201ENSMUST00000116375 Myo3aQ8K3H5 1613 aa13.85□□□□□ -0.19
Cstf1-201ENSMUST00000116375 Ccdc30Q8BVF4 654 aa13.84□□□□□ -0.19
Cstf1-201ENSMUST00000116375 Abca8aQ8K442 1620 aa13.84□□□□□ -0.19
Cstf1-201ENSMUST00000116375 Gprasp1Q5U4C1 1347 aa13.84□□□□□ -0.19
Cstf1-201ENSMUST00000116375 Ttll13A4Q9F6 804 aa13.84□□□□□ -0.19
Cstf1-201ENSMUST00000116375 Depdc5P61460 1591 aa13.84□□□□□ -0.19
Cstf1-201ENSMUST00000116375 Myom2Q14BI5 1463 aa13.84□□□□□ -0.19
Cstf1-201ENSMUST00000116375 IqubQ8CDK3 788 aa13.83□□□□□ -0.2
Cstf1-201ENSMUST00000116375 EspnQ9ET47 871 aa13.83□□□□□ -0.2
Cstf1-201ENSMUST00000116375 Zmym3Q9JLM4 1370 aa13.83□□□□□ -0.2
Cstf1-201ENSMUST00000116375 Adgrb3Q80ZF8 1522 aa13.83□□□□□ -0.2
Cstf1-201ENSMUST00000116375 Stag3O70576 1240 aa13.83□□□□□ -0.2
Cstf1-201ENSMUST00000116375 PtprtQ99M80 1454 aa13.82□□□□□ -0.2
Cstf1-201ENSMUST00000116375 Uggt1Q6P5E4 1551 aa13.82□□□□□ -0.2
Cstf1-201ENSMUST00000116375 Topbp1Q6ZQF0 1515 aa13.82□□□□□ -0.2
Cstf1-201ENSMUST00000116375 Neurod2Q62414 383 aa13.82□□□□□ -0.2
Cstf1-201ENSMUST00000116375 Efcab6Q6P1E8 1516 aa13.82□□□□□ -0.2
Cstf1-201ENSMUST00000116375 Ak9G3UYQ4 1894 aa13.81□□□□□ -0.2
Cstf1-201ENSMUST00000116375 Mapk8ip3Q9ESN9 1337 aa13.81□□□□□ -0.2
Cstf1-201ENSMUST00000116375 Prex1Q69ZK0 1650 aa13.8□□□□□ -0.2
Cstf1-201ENSMUST00000116375 Talpid3E9PV87 1520 aa13.8□□□□□ -0.2
Cstf1-201ENSMUST00000116375 Usp19Q3UJD6 1360 aa13.8□□□□□ -0.2
Cstf1-201ENSMUST00000116375 Chmp5Q9D7S9 219 aa13.8□□□□□ -0.2
Cstf1-201ENSMUST00000116375 Gli2Q0VGT2 1544 aa13.79□□□□□ -0.2
Cstf1-201ENSMUST00000116375 DnmbpQ6TXD4 1580 aa13.79□□□□□ -0.2
Cstf1-201ENSMUST00000116375 Kdm2bQ6P1G2 1309 aa13.79□□□□□ -0.2
Cstf1-201ENSMUST00000116375 Atp10aO54827 1508 aa13.79□□□□□ -0.2
Cstf1-201ENSMUST00000116375 Cnga1P29974 684 aa13.78□□□□□ -0.2
Cstf1-201ENSMUST00000116375 Map4k4P97820 1233 aaKnown RBP13.78□□□□□ -0.2
Cstf1-201ENSMUST00000116375 Slc52a2Q9D8F3 450 aa13.78□□□□□ -0.2
Cstf1-201ENSMUST00000116375 Apbb1Q9QXJ1 710 aa13.78□□□□□ -0.2
Cstf1-201ENSMUST00000116375 CenpjQ569L8 1344 aa13.78□□□□□ -0.2
Cstf1-201ENSMUST00000116375 Ccdc9Q8VC31 543 aaKnown RBP13.78□□□□□ -0.2
Cstf1-201ENSMUST00000116375 InsrP15208 1372 aa13.78□□□□□ -0.2
Cstf1-201ENSMUST00000116375 Cdk5rap2Q8K389 1822 aa13.78□□□□□ -0.2
Cstf1-201ENSMUST00000116375 Tecpr2Q3UH45 1423 aa13.77□□□□□ -0.2
Retrieved 100 of 22,080 RNA–protein pairs in 19.4 ms